Rroxscaffold_3G00231980

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000191
Physical Location & Seq
Forward (+)
17545846 .. 17548677
2832 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00231980.1

Sequence Viewer

Length: 1632 bp
ATGGCCACTTTTCCGGAGAGCCAAACTCTACTGCTCAACGACGTTGTGGAGGGCGCCGTTGACTGCAACGGCCATCCTGTCCGCAGATCAAGTTCAGGCGGGGTGGAGGTTGCCGAGAGGCTTGCGTACTATGGAATCAGCTCCAACCTTATTTCGTTTCTGACAGGGCCTCTCGGACAGTCGACGGCCACGGCGGCTGAGAACGTCAACATATGGTCCGGAACAGCGTTCTTGTTTCCTCTATTGGGAGCGTTCGTGGCAGATTCTTTTCTCGGTCGTTACCGCACCATCATTGCCGCTTCTGTCCTCTACGTCATGGGTCTTGCCTTGCTGACTGTGTCAGCCGTGCTTCCGTCTTCTCAGCTTCAAGTATTATTGTTCTTTTTCTCTCTATATTTAGTAGCAGTTGGGCAAGGTGGACACAAGCCCTGTGTTCAGGCTTTCGGAGCAGATCAGTTCGACAGACACGATCCAGAGGAGAGCAAAGCGAAAAGCTCATTTTTCAATTGGTGGTATCTTAGTATGTGTGTAGGCCCCATGATTACCTTTCCAGTATTAGCCTACATACAGGACAACCTGAGTTGGGGTCTGGGTTTTGGTCTTCCTTGCATTGTGATGGTCCTTGCACTGCTTATCTTCCTTCTTGGAACAAGAACGTACCGGTATAGTATCAAAGGGGATGAGGACAGCCCATTTGTGAGAATTGGCAAGGTGTTTGCTGTTGCATTAAGGAATTGGCGAACTACTCCTTCAGCAATAGCTTCAGAAGAGGAATCTCGTGGAACCCTGTCTCACCAAAGTTCTCAACAATTCAAATTGCTCAACAAAGCCTTGCTTGCACGGGATGATTTGAAGGAAAATGGGAAAGTGTGTACCATCGCTGAGGTTGAAGAAGCAAAAGCCGTTCTTAGGCTGTTTCCTATATGGGTTACATGCTTGCCATATGCCATTGTGTTTGCACAGTGCTCGACTTTTTTCACTAAGCAAGGTGCTACCATGGACAGAACAATTGTGCCACGTTTTGATATACCAGCTGCTTCACTTCAGTCGTTTATCGGCATTGCCACTATTATATTCATTCCCATTTATGATCGCATATTTGTTCCAATAGCAAGAGCTTTCACTAGAGAACCCTCTGGCATTACAATGCTACGAAGAATCGGAACTGGGATGTTTATATCTATTATTTCCATGGTAGTTGCAGCTTTAGTTGAGATGCAAAGGGTCCAAACTGCTAAAGACTATAATCTGGCTGATAAGCCTAGTGCCACGGTTCCAATGAGTGTTTGGTGGTTAGGTCCTCAGTACTTGTTAATTGGACTGGCCGATGTTTTCACTATGGTTGGTCTGCAAGAGTTCTTCTACGATCAGGTACCAAATGAATTAAGAAGCGTAGGACTTGCCCTCTACCTCAGTATATTTGGTGTGGGAAGCTTTCTGAGCAGCTTTCTTATCTCTGTTATTGAGGAAGCAACCAGTTGGGCAGGTCACACTAGCTGGTTTTCCAATAACCTCAATCGTGCACATCTTGATTACTTCTATTGGTTACTTGTAGCGGTCAATGCAGTAGGATTCGTGGTCTACATGTATTTCGCAAAATCGTACATATATAATAGGGGTAGTACAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

543

Amino Acids

60.06

Weight (kDa)

6.61

Isoelectric Point (pI)

37.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 42 - 481 1.1e-17 Major Facilitator Superfamily
PTR2 PF00854 94 - 500 2e-99 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1475
Acc65I GGTACC 1 cut(s) 1372
AccB1I GGYRCC 2 cut(s) 53, 1372
AccI GTMKAC 2 cut(s) 182, 1581
AccIII TCCGGA 2 cut(s) 13, 218
AciI CCGC 6 cut(s) 82, 99, 194, 283, 297, 1556
AclWI GGATC 1 cut(s) 464
AcoI YGGCCR 4 cut(s) 3, 70, 186, 1323
AcuI CTGAAG 3 cut(s) 735, 747, 1028
AcyI GRCGYC 1 cut(s) 54
AfaI GTAC 7 cut(s) 128, 659, 874, 1307, 1374, 1604, 1624
AfiI CCNNNNNNNGG 3 cut(s) 245, 583, 909
AflIII ACRYGT 1 cut(s) 1584
AgeI ACCGGT 1 cut(s) 660
AgsI TTSAA 5 cut(s) 368, 505, 814, 853, 890
Alw21I GWGCWC 2 cut(s) 968, 1525
Alw26I GTCTC 1 cut(s) 795
Alw44I GTGCAC 1 cut(s) 1521
AlwI GGATC 1 cut(s) 464
Aor13HI TCCGGA 2 cut(s) 13, 218
AoxI GGCC 6 cut(s) 3, 70, 167, 186, 532, 1323
ApaLI GTGCAC 1 cut(s) 1521
ApeKI GCWGC 3 cut(s) 1034, 1202, 1443
ArsI GACNNNNNNTTYG 2 cut(s) 677, 709
AsiGI ACCGGT 1 cut(s) 660
Asp718I GGTACC 1 cut(s) 1372
AspLEI GCGC 1 cut(s) 56
AspS9I GGNCC 6 cut(s) 167, 216, 533, 619, 1225, 1298
AsuHPI GGTGA 1 cut(s) 785
AvaII GGWCC 4 cut(s) 216, 619, 1225, 1298
BaeGI GKGCMC 1 cut(s) 1525
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 53, 1372
BauI CACGAG 1 cut(s) 777
BbsI GAAGAC 2 cut(s) 348, 593
Bbv12I GWGCWC 2 cut(s) 968, 1525
BbvCI CCTCAGC 1 cut(s) 882
BbvI GCAGC 3 cut(s) 1021, 1214, 1455
BccI CCATC 4 cut(s) 81, 296, 610, 884
BceAI ACGGC 6 cut(s) 41, 85, 201, 207, 329, 887
BcgI CGANNNNNNTGC 4 cut(s) 104, 138, 948, 982
BcoDI GTCTC 1 cut(s) 795
BfaI CTAG 3 cut(s) 1125, 1263, 1494
BfoI RGCGCY 1 cut(s) 57
BfuAI ACCTGC 1 cut(s) 1475
BglI GCCNNNNNGGC 1 cut(s) 194
BisI GCNGC 5 cut(s) 195, 297, 1035, 1203, 1444
BlsI GCNGC 5 cut(s) 196, 298, 1036, 1204, 1445
BmcAI AGTACT 1 cut(s) 1307
Bme18I GGWCC 4 cut(s) 216, 619, 1225, 1298
BmgT120I GGNCC 6 cut(s) 167, 216, 533, 619, 1225, 1298
BmiI GGNNCC 6 cut(s) 55, 535, 784, 1226, 1275, 1374
BmrI ACTGGG 1 cut(s) 1176
BmsI GCATC 1 cut(s) 1206
BmuI ACTGGG 1 cut(s) 1176
BpiI GAAGAC 2 cut(s) 348, 593
BplI GAGNNNNNCTC 2 cut(s) 10, 42
Bpu10I CCTNAGC 1 cut(s) 882
BsaHI GRCGYC 1 cut(s) 54
BsaJI CCNNGG 4 cut(s) 189, 996, 1191, 1269
BsaWI WCCGGW 3 cut(s) 13, 218, 660
BsaXI ACNNNNNCTCC 2 cut(s) 240, 270
Bsc4I CCNNNNNNNGG 3 cut(s) 245, 583, 909
Bse118I RCCGGY 1 cut(s) 660
Bse1I ACTGG 4 cut(s) 551, 1171, 1326, 1476
Bse3DI GCAATG 2 cut(s) 291, 1059
BseAI TCCGGA 2 cut(s) 13, 218
BseDI CCNNGG 4 cut(s) 189, 996, 1191, 1269
BseGI GGATG 4 cut(s) 73, 685, 850, 1176
BseLI CCNNNNNNNGG 3 cut(s) 245, 583, 909
BseMI GCAATG 2 cut(s) 291, 1059
BseMII CTCAG 7 cut(s) 189, 374, 569, 873, 1316, 1426, 1430
BseNI ACTGG 4 cut(s) 551, 1171, 1326, 1476
BseRI GAGGAG 1 cut(s) 491
BseSI GKGCMC 1 cut(s) 1525
BseXI GCAGC 3 cut(s) 1021, 1214, 1455
Bsh1285I CGRYCG 1 cut(s) 277
BshFI GGCC 6 cut(s) 5, 72, 169, 188, 534, 1325
BshNI GGYRCC 2 cut(s) 53, 1372
BshTI ACCGGT 1 cut(s) 660
BsiEI CGRYCG 1 cut(s) 277
BsiHKAI GWGCWC 2 cut(s) 968, 1525
BsiSI CCGG 3 cut(s) 14, 219, 661
BslI CCNNNNNNNGG 3 cut(s) 245, 583, 909
BsmAI GTCTC 1 cut(s) 795
BsnI GGCC 6 cut(s) 5, 72, 169, 188, 534, 1325
Bsp1286I GDGCHC 2 cut(s) 968, 1525
Bsp13I TCCGGA 2 cut(s) 13, 218
Bsp143I GATC 5 cut(s) 86, 451, 469, 1090, 1366
Bsp19I CCATGG 2 cut(s) 996, 1191
BspACI CCGC 6 cut(s) 82, 99, 194, 283, 297, 1556
BspANI GGCC 6 cut(s) 5, 72, 169, 188, 534, 1325
BspCNI CTCAG 7 cut(s) 190, 373, 570, 874, 1315, 1425, 1431
BspEI TCCGGA 2 cut(s) 13, 218
BspLI GGNNCC 6 cut(s) 55, 535, 784, 1226, 1275, 1374
BspMI ACCTGC 1 cut(s) 1475
BspPI GGATC 1 cut(s) 464
BspT107I GGYRCC 2 cut(s) 53, 1372
BsrDI GCAATG 2 cut(s) 291, 1059
BsrFI RCCGGY 1 cut(s) 660
BsrI ACTGG 4 cut(s) 551, 1171, 1326, 1476
BssAI RCCGGY 1 cut(s) 660
BssECI CCNNGG 4 cut(s) 189, 996, 1191, 1269
BssMI GATC 5 cut(s) 86, 451, 469, 1090, 1366
BssNI GRCGYC 1 cut(s) 54
BssSI CACGAG 1 cut(s) 777
BssT1I CCWWGG 2 cut(s) 996, 1191
Bst2BI CACGAG 1 cut(s) 777
Bst4CI ACNGT 4 cut(s) 180, 337, 963, 1273
Bst6I CTCTTC 1 cut(s) 762
BstACI GRCGYC 1 cut(s) 54
BstC8I GCNNGC 3 cut(s) 123, 837, 938
BstDSI CCRYGG 4 cut(s) 189, 996, 1191, 1269
BstF5I GGATG 4 cut(s) 73, 685, 850, 1176
BstH2I RGCGCY 1 cut(s) 57
BstHHI GCGC 1 cut(s) 56
BstKTI GATC 5 cut(s) 89, 454, 472, 1093, 1369
BstMAI GTCTC 1 cut(s) 795
BstMBI GATC 5 cut(s) 86, 451, 469, 1090, 1366
BstMCI CGRYCG 1 cut(s) 277
BstMWI GCNNNNNNNGC 6 cut(s) 194, 257, 446, 836, 1440, 1562
BstNSI RCATGY 2 cut(s) 936, 1588
BstSLI GKGCMC 1 cut(s) 1525
BstV1I GCAGC 3 cut(s) 1021, 1214, 1455
BstV2I GAAGAC 2 cut(s) 348, 593
BsuRI GGCC 6 cut(s) 5, 72, 169, 188, 534, 1325
BtgI CCRYGG 4 cut(s) 189, 996, 1191, 1269
BtgZI GCGATG 1 cut(s) 862
BtsCI GGATG 4 cut(s) 73, 685, 850, 1176
BtsI GCAGTG 1 cut(s) 626
BtsIMutI CAGTG 2 cut(s) 626, 968
BveI ACCTGC 1 cut(s) 1475
Cac8I GCNNGC 3 cut(s) 123, 837, 938
CfoI GCGC 1 cut(s) 56
Cfr10I RCCGGY 1 cut(s) 660
Cfr13I GGNCC 6 cut(s) 167, 216, 533, 619, 1225, 1298
Csp6I GTAC 7 cut(s) 127, 658, 873, 1306, 1373, 1603, 1623
CspAI ACCGGT 1 cut(s) 660
CviAII CATG 6 cut(s) 316, 538, 933, 997, 1192, 1585
CviQI GTAC 7 cut(s) 127, 658, 873, 1306, 1373, 1603, 1623
DinI GGCGCC 1 cut(s) 55
DpnI GATC 5 cut(s) 88, 453, 471, 1092, 1368
DpnII GATC 5 cut(s) 86, 451, 469, 1090, 1366
EaeI YGGCCR 4 cut(s) 3, 70, 186, 1323
Eam1104I CTCTTC 1 cut(s) 762
EarI CTCTTC 1 cut(s) 762
Eco130I CCWWGG 2 cut(s) 996, 1191
Eco47I GGWCC 4 cut(s) 216, 619, 1225, 1298
Eco57I CTGAAG 3 cut(s) 735, 747, 1028
EcoO109I RGGNCCY 3 cut(s) 167, 533, 1298
EcoT14I CCWWGG 2 cut(s) 996, 1191
EgeI GGCGCC 1 cut(s) 55
EheI GGCGCC 1 cut(s) 55
ErhI CCWWGG 2 cut(s) 996, 1191
FaeI CATG 6 cut(s) 319, 541, 936, 1000, 1195, 1588
FalI AAGNNNNNCTT 4 cut(s) 819, 851, 891, 923
FatI CATG 6 cut(s) 315, 537, 932, 996, 1191, 1584
FauI CCCGC 1 cut(s) 92
FauNDI CATATG 2 cut(s) 212, 943
FblI GTMKAC 2 cut(s) 182, 1581
Fnu4HI GCNGC 5 cut(s) 195, 297, 1035, 1203, 1444
FokI GGATG 4 cut(s) 60, 692, 857, 1183
Fsp4HI GCNGC 5 cut(s) 195, 297, 1035, 1203, 1444
FspBI CTAG 3 cut(s) 1125, 1263, 1494
GlaI GCGC 1 cut(s) 55
GluI GCNGC 5 cut(s) 195, 297, 1035, 1203, 1444
HaeII RGCGCY 1 cut(s) 57
HaeIII GGCC 6 cut(s) 5, 72, 169, 188, 534, 1325
HapII CCGG 3 cut(s) 14, 219, 661
HhaI GCGC 1 cut(s) 56
Hin1I GRCGYC 1 cut(s) 54
Hin1II CATG 6 cut(s) 319, 541, 936, 1000, 1195, 1588
Hin6I GCGC 1 cut(s) 54
HinP1I GCGC 1 cut(s) 54
HincII GTYRAC 3 cut(s) 61, 183, 208
HindII GTYRAC 3 cut(s) 61, 183, 208
HindIII AAGCTT 1 cut(s) 1432
HinfI GANTC 5 cut(s) 135, 263, 773, 1158, 1572
HpaII CCGG 3 cut(s) 14, 219, 661
HphI GGTGA 1 cut(s) 785
Hpy166II GTNNAC 7 cut(s) 61, 183, 208, 419, 873, 1523, 1582
Hpy188I TCNGA 6 cut(s) 162, 176, 446, 766, 1163, 1440
Hpy188III TCNNGA 4 cut(s) 14, 219, 473, 1529
Hpy8I GTNNAC 7 cut(s) 61, 183, 208, 419, 873, 1523, 1582
Hpy99I CGWCG 2 cut(s) 44, 187
HpyAV CCTTC 3 cut(s) 650, 759, 847
HpyCH4III ACNGT 4 cut(s) 180, 337, 963, 1273
HpyCH4IV ACGT 5 cut(s) 42, 204, 312, 656, 1018
HpyF10VI GCNNNNNNNGC 6 cut(s) 194, 257, 446, 836, 1440, 1562
HpySE526I ACGT 5 cut(s) 42, 204, 312, 656, 1018
Hsp92I GRCGYC 1 cut(s) 54
Hsp92II CATG 6 cut(s) 319, 541, 936, 1000, 1195, 1588
HspAI GCGC 1 cut(s) 54
KasI GGCGCC 1 cut(s) 53
Kpn2I TCCGGA 2 cut(s) 13, 218
KpnI GGTACC 1 cut(s) 1376
Kzo9I GATC 5 cut(s) 86, 451, 469, 1090, 1366
LmnI GCTCC 3 cut(s) 146, 248, 446
Lsp1109I GCAGC 3 cut(s) 1021, 1214, 1455
LweI GCATC 1 cut(s) 1206
MaeI CTAG 3 cut(s) 1125, 1263, 1494
MaeII ACGT 5 cut(s) 42, 204, 312, 656, 1018
MaeIII GTNAC 4 cut(s) 278, 928, 1487, 1545
MalI GATC 5 cut(s) 88, 453, 471, 1092, 1368
MboI GATC 5 cut(s) 86, 451, 469, 1090, 1366
MboII GAAGA 7 cut(s) 348, 593, 628, 779, 902, 1167, 1351
MfeI CAATTG 2 cut(s) 505, 1008
MhlI GDGCHC 2 cut(s) 968, 1525
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 505, 702, 733, 809, 815, 1008, 1314, 1382
MluNI TGGCCA 1 cut(s) 5
Mly113I GGCGCC 1 cut(s) 54
MmeI TCCRAC 1 cut(s) 168
Mox20I TGGCCA 1 cut(s) 5
MroI TCCGGA 2 cut(s) 13, 218
MscI TGGCCA 1 cut(s) 5
MseI TTAA 3 cut(s) 728, 1313, 1385
MslI CAYNNNNRTG 2 cut(s) 614, 1145
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 1034
MspI CCGG 3 cut(s) 14, 219, 661
MunI CAATTG 2 cut(s) 505, 1008
MwoI GCNNNNNNNGC 6 cut(s) 194, 257, 446, 836, 1440, 1562
NarI GGCGCC 1 cut(s) 54
NcoI CCATGG 2 cut(s) 996, 1191
NdeI CATATG 2 cut(s) 212, 943
NdeII GATC 5 cut(s) 86, 451, 469, 1090, 1366
NlaIII CATG 6 cut(s) 319, 541, 936, 1000, 1195, 1588
NlaIV GGNNCC 6 cut(s) 55, 535, 784, 1226, 1275, 1374
NmeAIII GCCGAG 1 cut(s) 139
NmuCI GTSAC 1 cut(s) 1487
NspI RCATGY 2 cut(s) 936, 1588
PciI ACATGT 1 cut(s) 1584
PcsI WCGNNNNNNNCGW 1 cut(s) 465
PfeI GAWTC 5 cut(s) 135, 263, 773, 1158, 1572
PflFI GACNNNGTC 1 cut(s) 337
PinAI ACCGGT 1 cut(s) 660
PkrI GCNGC 5 cut(s) 196, 298, 1036, 1204, 1445
PluTI GGCGCC 1 cut(s) 57
PpuMI RGGWCCY 1 cut(s) 1298
PscI ACATGT 1 cut(s) 1584
Psp5II RGGWCCY 1 cut(s) 1298
PspN4I GGNNCC 6 cut(s) 55, 535, 784, 1226, 1275, 1374
PspPI GGNCC 6 cut(s) 167, 216, 533, 619, 1225, 1298
PspPPI RGGWCCY 1 cut(s) 1298
PsyI GACNNNGTC 1 cut(s) 337
PvuII CAGCTG 1 cut(s) 1034
RsaI GTAC 7 cut(s) 128, 659, 874, 1307, 1374, 1604, 1624
RsaNI GTAC 7 cut(s) 127, 658, 873, 1306, 1373, 1603, 1623
RseI CAYNNNNRTG 2 cut(s) 614, 1145
SalI GTCGAC 1 cut(s) 181
SaqAI TTAA 3 cut(s) 728, 1313, 1385
SatI GCNGC 5 cut(s) 195, 297, 1035, 1203, 1444
Sau3AI GATC 5 cut(s) 86, 451, 469, 1090, 1366
Sau96I GGNCC 6 cut(s) 167, 216, 533, 619, 1225, 1298
ScaI AGTACT 1 cut(s) 1307
SduI GDGCHC 2 cut(s) 968, 1525
SfaNI GCATC 1 cut(s) 1206
SfoI GGCGCC 1 cut(s) 55
SinI GGWCC 4 cut(s) 216, 619, 1225, 1298
SmiMI CAYNNNNRTG 2 cut(s) 614, 1145
Sse9I AATT 8 cut(s) 505, 702, 733, 809, 815, 1008, 1314, 1382
SsiI CCGC 6 cut(s) 82, 99, 194, 283, 297, 1556
SspDI GGCGCC 1 cut(s) 53
SspMI CTAG 3 cut(s) 1125, 1263, 1494
StyI CCWWGG 2 cut(s) 996, 1191
TaaI ACNGT 4 cut(s) 180, 337, 963, 1273
TaiI ACGT 5 cut(s) 45, 207, 315, 659, 1021
TaqI TCGA 3 cut(s) 182, 459, 968
TaqII GACCGA 1 cut(s) 263
TasI AATT 8 cut(s) 505, 702, 733, 809, 815, 1008, 1314, 1382
TatI WGTACW 2 cut(s) 1305, 1622
TauI GCSGC 2 cut(s) 197, 299
TfiI GAWTC 5 cut(s) 135, 263, 773, 1158, 1572
Tru1I TTAA 3 cut(s) 728, 1313, 1385
Tru9I TTAA 3 cut(s) 728, 1313, 1385
TscAI CASTG 2 cut(s) 633, 968
TseFI GTSAC 1 cut(s) 1487
TseI GCWGC 3 cut(s) 1034, 1202, 1443
Tsp45I GTSAC 1 cut(s) 1487
TspDTI ATGAA 2 cut(s) 1066, 1395
TspGWI ACGGA 1 cut(s) 342
TspRI CASTG 2 cut(s) 633, 968
Tth111I GACNNNGTC 1 cut(s) 337
VneI GTGCAC 1 cut(s) 1521
VpaK11BI GGWCC 4 cut(s) 216, 619, 1225, 1298
XceI RCATGY 2 cut(s) 936, 1588
XcmI CCANNNNNNNNNTGG 1 cut(s) 1284
XmiI GTMKAC 2 cut(s) 182, 1581
XspI CTAG 3 cut(s) 1125, 1263, 1494
ZrmI AGTACT 1 cut(s) 1307
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.