Rroxscaffold_3G00231930

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000191
Physical Location & Seq
Forward (+)
17453284 .. 17456458
3175 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00231930.1

Sequence Viewer

Length: 1644 bp
ATGGCTACTTCTCACGAAGAATCTCCAGACACCCAAACCCCACTCATAGACGACGTCCTAGAAAGCGCCGTTGACTACAAAGGCCATCCGGTCCACAAATCCACCTCCGGCGGGGTGGAAGTTGCGGAGAGGTTCGCATACTACGGGATTGAATCCAATCTGATAACGTTTCTGACGGGGCCGTTGGGACAGTCGACGGTGACGGCAGCGGAGAATGTGAACATATGGTCCGGAACGGCGCAGTTGCTTCCTCTGTTGGGAGCATTCGTGGCGGATTCTTTTCTGGGTCGCTATCGCACTATTGTTGCTGCTTCTCTCCTCTACATTTTGGGACTCGGCTTGTTGACCGTGTCGGCCTTGCTTACTTCTTCTGAGCTTCAAATAGTGTTATTCTTCTTCTCTCTATATCTAGTAGCAGTTGCGCAAGGTGGACACAAGCCCTGTGTTCAGGCTTTCGGGGCAGATCAGTTTGACGGACAAGATCCAGAGGAGTGCAAAGCGAAAAGCTCATTCTTCAATTGGTGGTACTTTGGTATGAATGCTGGCATACTATTGACATTCTCAGTATTGATCTACATACAGGACAATCTAAGCTGGGGTCTGGGTTTTGGAATTCCTTGTGTTGTGATGGTCCTTGCAATGATTATTTTTGTCAGTGGAACTAGGACATACCGGTATAGCATCCAAGGGGAGGAGGAAAGCCCATTTGTGAGAATTGGCAAGGTTTTTGTTGCTGCATTAAGGAACCGGCGAACTAGTCCTTCAGTAATAGCTTCTGAAGAGGAATCCCGTGGAACCTTGCCTGATCAAAGTTCTGAACAATTCAAGTTCCTCAACAAAGCCTTGCTTGCACCAGATAATTTGAAGAAAAACGGGAAGGTGTGTACCATCATTGAGGTTGAGGAAGCAAAGGCTGTCCTGAGGCTGTTTCCAATATGGGCTACATGCTTGCCATTTGCTATTGTATGTGCACAGTCCAGTACATTCTTCACCAAGCAAGGTGCTACCATGGACAGAACTATTGTGCCCGGTTTTGACATTCCAGCTGCTTCACTTCAGTCATTTATCTGCCTTACCATAATGATGATCATACCCATTTATGACGGCATTTTTGTTCCAATGGCAAGAGCTTTCACCAGAGAACCCTTTGGCATTACAATGCTACAAAGAATCGGAACTGGGATGTTTTTCTCTATCATATCTATGGTCGTTGCAGGTTTAGTTGAGATGAAAAGGCTCCAAACTGCCAAAGATTATGATCTGGTTGATCTGCCAAGTGCCACAATTCCAATGAGTATTTGGTGGTTGGTTCCTCAGTACTTTTTGTATGGACTAGCCGATGTTTTCACCGTTGTTGGTCTACAAGAGTTCTTCTATGATCAGGTACCAAATGAATTAAGAAGCATGGGACTTGCTCTCTACCTCAGTATATTTGGTGTGGGAAACTTTCTGAGCAGCTTTCTTATCTTTATTATTGAGGAAGCAACCAGTTGGGGAGGCCACACTAGCTGGTTTTCGGCCAACCTTAATCTTGCACATCTTGATTACTTTTACTGGTTACTAGCAGCACTCTGTGGAGTAGGATTGTTGGTCTACATGTATTTTGCAAAATCTTACATTTACAATAGGGCTAGTATAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

547

Amino Acids

60.54

Weight (kDa)

5.08

Isoelectric Point (pI)

43.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 52 - 485 4.5e-10 Major Facilitator Superfamily
PTR2 PF00854 98 - 504 2.5e-95 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 57
Acc16I TGCGCA 1 cut(s) 423
Acc36I ACCTGC 1 cut(s) 1205
Acc65I GGTACC 1 cut(s) 1384
AccB1I GGYRCC 1 cut(s) 1384
AccI GTMKAC 3 cut(s) 194, 1360, 1593
AccIII TCCGGA 1 cut(s) 230
AciI CCGC 4 cut(s) 111, 125, 209, 272
AclI AACGTT 1 cut(s) 167
AclWI GGATC 1 cut(s) 476
AcoI YGGCCR 1 cut(s) 1518
AcsI RAATTY 1 cut(s) 612
AcuI CTGAAG 3 cut(s) 747, 798, 1040
AcyI GRCGYC 1 cut(s) 54
AdeI CACNNNGTG 1 cut(s) 1574
AfaI GTAC 5 cut(s) 527, 886, 982, 1319, 1386
AfiI CCNNNNNNNGG 3 cut(s) 111, 257, 691
AflIII ACRYGT 1 cut(s) 1596
AgeI ACCGGT 1 cut(s) 672
AgsI TTSAA 5 cut(s) 152, 380, 517, 826, 865
AhlI ACTAGT 1 cut(s) 755
AloI GAACNNNNNNTCC 2 cut(s) 212, 244
AluBI AGCT 8 cut(s) 376, 507, 594, 773, 1046, 1130, 1458, 1509
AluI AGCT 8 cut(s) 376, 507, 594, 773, 1046, 1130, 1458, 1509
Alw21I GWGCWC 1 cut(s) 973
Alw44I GTGCAC 1 cut(s) 969
AlwI GGATC 1 cut(s) 476
Aor13HI TCCGGA 1 cut(s) 230
AoxI GGCC 5 cut(s) 82, 179, 354, 1498, 1518
ApaLI GTGCAC 1 cut(s) 969
ApeKI GCWGC 6 cut(s) 206, 308, 734, 1046, 1455, 1565
ApoI RAATTY 1 cut(s) 612
ArsI GACNNNNNNTTYG 2 cut(s) 1094, 1126
AsiGI ACCGGT 1 cut(s) 672
Asp718I GGTACC 1 cut(s) 1384
AspLEI GCGC 3 cut(s) 68, 241, 424
AspS9I GGNCC 4 cut(s) 91, 179, 228, 631
AsuC2I CCSGG 1 cut(s) 1029
AsuHPI GGTGA 4 cut(s) 211, 982, 1126, 1339
AvaII GGWCC 3 cut(s) 91, 228, 631
AxyI CCTNAGG 1 cut(s) 920
BaeGI GKGCMC 2 cut(s) 973, 1029
BaeI ACNNNNGTAYC 2 cut(s) 517, 550
BanI GGYRCC 1 cut(s) 1384
Bbv12I GWGCWC 1 cut(s) 973
BbvI GCAGC 6 cut(s) 218, 295, 721, 1033, 1467, 1577
BccI CCATC 3 cut(s) 93, 622, 896
BceAI ACGGC 5 cut(s) 53, 166, 219, 252, 1120
BclI TGATCA 3 cut(s) 805, 1086, 1378
BcnI CCSGG 1 cut(s) 1029
BcuI ACTAGT 1 cut(s) 755
BfaI CTAG 8 cut(s) 59, 410, 663, 756, 1334, 1506, 1562, 1632
BfoI RGCGCY 1 cut(s) 69
BfuAI ACCTGC 1 cut(s) 1205
BisI GCNGC 6 cut(s) 207, 309, 735, 1047, 1456, 1566
BlsI GCNGC 6 cut(s) 208, 310, 736, 1048, 1457, 1567
BmcAI AGTACT 1 cut(s) 1319
Bme1390I CCNGG 1 cut(s) 1029
Bme18I GGWCC 3 cut(s) 91, 228, 631
BmgT120I GGNCC 4 cut(s) 91, 179, 228, 631
BmiI GGNNCC 6 cut(s) 180, 746, 796, 1238, 1311, 1386
BmrFI CCNGG 1 cut(s) 1029
BmrI ACTGGG 1 cut(s) 1188
BmsI GCATC 1 cut(s) 690
BmuI ACTGGG 1 cut(s) 1188
BpmI CTGGAG 1 cut(s) 9
BpuMI CCSGG 1 cut(s) 1029
BsaBI GATNNNNATC 1 cut(s) 1257
BsaHI GRCGYC 1 cut(s) 54
BsaJI CCNNGG 3 cut(s) 685, 790, 1008
BsaWI WCCGGW 3 cut(s) 88, 230, 672
BsaXI ACNNNNNCTCC 2 cut(s) 252, 282
Bsc4I CCNNNNNNNGG 3 cut(s) 111, 257, 691
Bse118I RCCGGY 2 cut(s) 672, 747
Bse1I ACTGG 4 cut(s) 978, 1183, 1488, 1559
Bse21I CCTNAGG 1 cut(s) 920
Bse3DI GCAATG 1 cut(s) 645
Bse8I GATNNNNATC 1 cut(s) 1257
BseAI TCCGGA 1 cut(s) 230
BseDI CCNNGG 3 cut(s) 685, 790, 1008
BseGI GGATG 3 cut(s) 85, 681, 1188
BseJI GATNNNNATC 1 cut(s) 1257
BseLI CCNNNNNNNGG 3 cut(s) 111, 257, 691
BseMI GCAATG 1 cut(s) 645
BseMII CTCAG 6 cut(s) 363, 576, 911, 1328, 1438, 1442
BseNI ACTGG 4 cut(s) 978, 1183, 1488, 1559
BseRI GAGGAG 3 cut(s) 308, 503, 707
BseSI GKGCMC 2 cut(s) 973, 1029
BseXI GCAGC 6 cut(s) 218, 295, 721, 1033, 1467, 1577
BseYI CCCAGC 1 cut(s) 594
BshFI GGCC 5 cut(s) 84, 181, 356, 1500, 1520
BshNI GGYRCC 1 cut(s) 1384
BshTI ACCGGT 1 cut(s) 672
BsiHKAI GWGCWC 1 cut(s) 973
BsiSI CCGG 6 cut(s) 89, 108, 231, 673, 748, 1029
BslFI GGGAC 3 cut(s) 201, 345, 1422
BslI CCNNNNNNNGG 3 cut(s) 111, 257, 691
BsmFI GGGAC 3 cut(s) 201, 345, 1422
BsmI GAATGC 2 cut(s) 263, 544
BsnI GGCC 5 cut(s) 84, 181, 356, 1500, 1520
Bsp1286I GDGCHC 2 cut(s) 973, 1029
Bsp13I TCCGGA 1 cut(s) 230
Bsp143I GATC 8 cut(s) 463, 481, 570, 805, 1086, 1258, 1267, 1378
Bsp19I CCATGG 1 cut(s) 1008
BspACI CCGC 4 cut(s) 111, 125, 209, 272
BspANI GGCC 5 cut(s) 84, 181, 356, 1500, 1520
BspCNI CTCAG 6 cut(s) 364, 575, 912, 1327, 1437, 1443
BspEI TCCGGA 1 cut(s) 230
BspLI GGNNCC 6 cut(s) 180, 746, 796, 1238, 1311, 1386
BspMI ACCTGC 1 cut(s) 1205
BspPI GGATC 1 cut(s) 476
BspT107I GGYRCC 1 cut(s) 1384
BsrDI GCAATG 1 cut(s) 645
BsrFI RCCGGY 2 cut(s) 672, 747
BsrI ACTGG 4 cut(s) 978, 1183, 1488, 1559
BssAI RCCGGY 2 cut(s) 672, 747
BssECI CCNNGG 3 cut(s) 685, 790, 1008
BssMI GATC 8 cut(s) 463, 481, 570, 805, 1086, 1258, 1267, 1378
BssNI GRCGYC 1 cut(s) 54
BssT1I CCWWGG 2 cut(s) 685, 1008
Bst4CI ACNGT 5 cut(s) 192, 199, 349, 975, 1351
Bst6I CTCTTC 1 cut(s) 774
BstACI GRCGYC 1 cut(s) 54
BstC8I GCNNGC 3 cut(s) 544, 849, 950
BstDEI CTNAG 7 cut(s) 372, 562, 590, 920, 1314, 1424, 1451
BstDSI CCRYGG 2 cut(s) 790, 1008
BstF5I GGATG 3 cut(s) 85, 681, 1188
BstH2I RGCGCY 1 cut(s) 69
BstHHI GCGC 3 cut(s) 68, 241, 424
BstKTI GATC 8 cut(s) 466, 484, 573, 808, 1089, 1261, 1270, 1381
BstMBI GATC 8 cut(s) 463, 481, 570, 805, 1086, 1258, 1267, 1378
BstMWI GCNNNNNNNGC 4 cut(s) 269, 458, 848, 1506
BstNSI RCATGY 2 cut(s) 948, 1600
BstSCI CCNGG 1 cut(s) 1027
BstSLI GKGCMC 2 cut(s) 973, 1029
BstV1I GCAGC 6 cut(s) 218, 295, 721, 1033, 1467, 1577
BstX2I RGATCY 1 cut(s) 481
BstYI RGATCY 1 cut(s) 481
Bsu36I CCTNAGG 1 cut(s) 920
BsuRI GGCC 5 cut(s) 84, 181, 356, 1500, 1520
BtgI CCRYGG 2 cut(s) 790, 1008
BtsCI GGATG 3 cut(s) 85, 681, 1188
BtsIMutI CAGTG 1 cut(s) 661
BveI ACCTGC 1 cut(s) 1205
Cac8I GCNNGC 3 cut(s) 544, 849, 950
CfoI GCGC 3 cut(s) 68, 241, 424
Cfr10I RCCGGY 2 cut(s) 672, 747
Cfr13I GGNCC 4 cut(s) 91, 179, 228, 631
Csp6I GTAC 5 cut(s) 526, 885, 981, 1318, 1385
CspAI ACCGGT 1 cut(s) 672
CviAII CATG 4 cut(s) 945, 1009, 1405, 1597
CviQI GTAC 5 cut(s) 526, 885, 981, 1318, 1385
DdeI CTNAG 7 cut(s) 372, 562, 590, 920, 1314, 1424, 1451
DpnI GATC 8 cut(s) 465, 483, 572, 807, 1088, 1260, 1269, 1380
DpnII GATC 8 cut(s) 463, 481, 570, 805, 1086, 1258, 1267, 1378
DraIII CACNNNGTG 1 cut(s) 1574
EaeI YGGCCR 1 cut(s) 1518
Eam1104I CTCTTC 1 cut(s) 774
EarI CTCTTC 1 cut(s) 774
EciI GGCGGA 1 cut(s) 287
Eco130I CCWWGG 2 cut(s) 685, 1008
Eco47I GGWCC 3 cut(s) 91, 228, 631
Eco57I CTGAAG 3 cut(s) 747, 798, 1040
Eco81I CCTNAGG 1 cut(s) 920
EcoRI GAATTC 1 cut(s) 612
EcoT14I CCWWGG 2 cut(s) 685, 1008
ErhI CCWWGG 2 cut(s) 685, 1008
FaeI CATG 4 cut(s) 948, 1012, 1408, 1600
FalI AAGNNNNNCTT 2 cut(s) 831, 863
FaqI GGGAC 3 cut(s) 201, 345, 1422
FatI CATG 4 cut(s) 944, 1008, 1404, 1596
FauI CCCGC 1 cut(s) 104
FauNDI CATATG 1 cut(s) 224
FbaI TGATCA 3 cut(s) 805, 1086, 1378
FblI GTMKAC 3 cut(s) 194, 1360, 1593
Fnu4HI GCNGC 6 cut(s) 207, 309, 735, 1047, 1456, 1566
FokI GGATG 3 cut(s) 72, 668, 1195
Fsp4HI GCNGC 6 cut(s) 207, 309, 735, 1047, 1456, 1566
FspBI CTAG 8 cut(s) 59, 410, 663, 756, 1334, 1506, 1562, 1632
FspI TGCGCA 1 cut(s) 423
GlaI GCGC 3 cut(s) 67, 240, 423
GluI GCNGC 6 cut(s) 207, 309, 735, 1047, 1456, 1566
GsaI CCCAGC 1 cut(s) 598
GsuI CTGGAG 1 cut(s) 9
HaeII RGCGCY 1 cut(s) 69
HaeIII GGCC 5 cut(s) 84, 181, 356, 1500, 1520
HapII CCGG 6 cut(s) 89, 108, 231, 673, 748, 1029
HhaI GCGC 3 cut(s) 68, 241, 424
Hin1I GRCGYC 1 cut(s) 54
Hin1II CATG 4 cut(s) 948, 1012, 1408, 1600
Hin6I GCGC 3 cut(s) 66, 239, 422
HinP1I GCGC 3 cut(s) 66, 239, 422
HincII GTYRAC 3 cut(s) 73, 195, 345
HindII GTYRAC 3 cut(s) 73, 195, 345
HinfI GANTC 6 cut(s) 20, 152, 275, 333, 785, 1170
HpaII CCGG 6 cut(s) 89, 108, 231, 673, 748, 1029
HphI GGTGA 4 cut(s) 211, 982, 1126, 1339
Hpy188I TCNGA 7 cut(s) 162, 174, 373, 778, 817, 1175, 1452
Hpy188III TCNNGA 6 cut(s) 14, 26, 231, 485, 919, 1541
Hpy99I CGWCG 2 cut(s) 56, 199
HpyAV CCTTC 2 cut(s) 771, 871
HpyCH4III ACNGT 5 cut(s) 192, 199, 349, 975, 1351
HpyCH4IV ACGT 2 cut(s) 54, 167
HpyCH4V TGCA 8 cut(s) 495, 638, 737, 851, 971, 1214, 1535, 1607
HpyF10VI GCNNNNNNNGC 4 cut(s) 269, 458, 848, 1506
HpyF3I CTNAG 7 cut(s) 372, 562, 590, 920, 1314, 1424, 1451
HpySE526I ACGT 2 cut(s) 54, 167
Hsp92I GRCGYC 1 cut(s) 54
Hsp92II CATG 4 cut(s) 948, 1012, 1408, 1600
HspAI GCGC 3 cut(s) 66, 239, 422
Kpn2I TCCGGA 1 cut(s) 230
KpnI GGTACC 1 cut(s) 1388
Ksp22I TGATCA 3 cut(s) 805, 1086, 1378
Kzo9I GATC 8 cut(s) 463, 481, 570, 805, 1086, 1258, 1267, 1378
LmnI GCTCC 2 cut(s) 260, 1242
Lsp1109I GCAGC 6 cut(s) 218, 295, 721, 1033, 1467, 1577
LweI GCATC 1 cut(s) 690
MaeI CTAG 8 cut(s) 59, 410, 663, 756, 1334, 1506, 1562, 1632
MaeII ACGT 2 cut(s) 54, 167
MaeIII GTNAC 2 cut(s) 199, 1557
MalI GATC 8 cut(s) 465, 483, 572, 807, 1088, 1260, 1269, 1380
MboI GATC 8 cut(s) 463, 481, 570, 805, 1086, 1258, 1267, 1378
MboII GAAGA 9 cut(s) 29, 360, 385, 388, 505, 791, 877, 979, 1363
MfeI CAATTG 1 cut(s) 517
MflI RGATCY 1 cut(s) 481
MhlI GDGCHC 2 cut(s) 973, 1029
MluCI AATT 7 cut(s) 517, 612, 714, 821, 859, 1284, 1394
MlyI GAGTC 1 cut(s) 327
MroI TCCGGA 1 cut(s) 230
MseI TTAA 3 cut(s) 740, 1397, 1527
MslI CAYNNNNRTG 3 cut(s) 1082, 1157, 1202
MspA1I CMGCKG 2 cut(s) 209, 1046
MspI CCGG 6 cut(s) 89, 108, 231, 673, 748, 1029
MspR9I CCNGG 1 cut(s) 1029
MunI CAATTG 1 cut(s) 517
Mva1269I GAATGC 2 cut(s) 263, 544
MwoI GCNNNNNNNGC 4 cut(s) 269, 458, 848, 1506
NciI CCSGG 1 cut(s) 1029
NcoI CCATGG 1 cut(s) 1008
NdeI CATATG 1 cut(s) 224
NdeII GATC 8 cut(s) 463, 481, 570, 805, 1086, 1258, 1267, 1378
NlaIII CATG 4 cut(s) 948, 1012, 1408, 1600
NlaIV GGNNCC 6 cut(s) 180, 746, 796, 1238, 1311, 1386
NmeAIII GCCGAG 1 cut(s) 315
NmuCI GTSAC 1 cut(s) 199
NsbI TGCGCA 1 cut(s) 423
NspI RCATGY 2 cut(s) 948, 1600
PciI ACATGT 1 cut(s) 1596
PctI GAATGC 2 cut(s) 263, 544
PfeI GAWTC 5 cut(s) 20, 152, 275, 785, 1170
PflFI GACNNNGTC 2 cut(s) 53, 349
PinAI ACCGGT 1 cut(s) 672
PkrI GCNGC 6 cut(s) 208, 310, 736, 1048, 1457, 1567
PleI GAGTC 1 cut(s) 327
PpsI GAGTC 1 cut(s) 327
PscI ACATGT 1 cut(s) 1596
Psp1406I AACGTT 1 cut(s) 167
PspFI CCCAGC 1 cut(s) 594
PspN4I GGNNCC 6 cut(s) 180, 746, 796, 1238, 1311, 1386
PspPI GGNCC 4 cut(s) 91, 179, 228, 631
PsuI RGATCY 1 cut(s) 481
PsyI GACNNNGTC 2 cut(s) 53, 349
PvuII CAGCTG 1 cut(s) 1046
RsaI GTAC 5 cut(s) 527, 886, 982, 1319, 1386
RsaNI GTAC 5 cut(s) 526, 885, 981, 1318, 1385
RseI CAYNNNNRTG 3 cut(s) 1082, 1157, 1202
SalI GTCGAC 1 cut(s) 193
SaqAI TTAA 3 cut(s) 740, 1397, 1527
SatI GCNGC 6 cut(s) 207, 309, 735, 1047, 1456, 1566
Sau3AI GATC 8 cut(s) 463, 481, 570, 805, 1086, 1258, 1267, 1378
Sau96I GGNCC 4 cut(s) 91, 179, 228, 631
ScaI AGTACT 1 cut(s) 1319
SchI GAGTC 1 cut(s) 327
ScrFI CCNGG 1 cut(s) 1029
SduI GDGCHC 2 cut(s) 973, 1029
SfaNI GCATC 1 cut(s) 690
SinI GGWCC 3 cut(s) 91, 228, 631
SmiMI CAYNNNNRTG 3 cut(s) 1082, 1157, 1202
SpeI ACTAGT 1 cut(s) 755
Sse9I AATT 7 cut(s) 517, 612, 714, 821, 859, 1284, 1394
SsiI CCGC 4 cut(s) 111, 125, 209, 272
SspMI CTAG 8 cut(s) 59, 410, 663, 756, 1334, 1506, 1562, 1632
StyD4I CCNGG 1 cut(s) 1027
StyI CCWWGG 2 cut(s) 685, 1008
TaaI ACNGT 5 cut(s) 192, 199, 349, 975, 1351
TaiI ACGT 2 cut(s) 57, 170
TaqI TCGA 1 cut(s) 194
TasI AATT 7 cut(s) 517, 612, 714, 821, 859, 1284, 1394
TatI WGTACW 2 cut(s) 980, 1317
TfiI GAWTC 5 cut(s) 20, 152, 275, 785, 1170
Tru1I TTAA 3 cut(s) 740, 1397, 1527
Tru9I TTAA 3 cut(s) 740, 1397, 1527
TscAI CASTG 1 cut(s) 661
TseFI GTSAC 1 cut(s) 199
TseI GCWGC 6 cut(s) 206, 308, 734, 1046, 1455, 1565
Tsp45I GTSAC 1 cut(s) 199
TspDTI ATGAA 3 cut(s) 551, 1244, 1407
TspGWI ACGGA 1 cut(s) 489
TspRI CASTG 1 cut(s) 661
Tth111I GACNNNGTC 2 cut(s) 53, 349
VneI GTGCAC 1 cut(s) 969
VpaK11BI GGWCC 3 cut(s) 91, 228, 631
XapI RAATTY 1 cut(s) 612
XceI RCATGY 2 cut(s) 948, 1600
XcmI CCANNNNNNNNNTGG 1 cut(s) 1296
XmiI GTMKAC 3 cut(s) 194, 1360, 1593
XspI CTAG 8 cut(s) 59, 410, 663, 756, 1334, 1506, 1562, 1632
ZraI GACGTC 1 cut(s) 55
ZrmI AGTACT 1 cut(s) 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.