Rroxscaffold_3G00231910

Protein NRT1 PTR FAMILY 5.10-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000191
Physical Location & Seq
Forward (+)
17410525 .. 17413689
3165 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00231910.1

Sequence Viewer

Length: 1611 bp
ATGTTATATAACGTAGGAGGGAGAACATGGAAAAGTTTGATACGGAATATCTCCCTCTACTCGGCCCGACCACCGGTAATGGCTACATCTCTCGAAGAATCTCTGGAGACCCAAACCCCACTCATAGACGACGTCGTAGACAGCGCCGTTGACTACAAAGGCCATCCGGTCCACAGATCCACCTCCGGCGGTTGGCGTTCCGCATCCTTCATAATAGGGGTGGAAGTTGCGGAGAGGTTCGCATACTATGGGATTAGCTCCAATCTGATAACGTTTCTGACGGGGCCGTTGGGACAGTCGACGGTGACGGCGGCGGAGAATGTGAACATATGGTCCGGAACAGCGTTCTTGTTTCCTCTATTGGGAGCGTTCGTGGCGGATTCTTTTCTCGGTCGCTACCGCACCATTATTGTTGCTTCTCTGCTCTATATTTTGGGACTCGGCTTGTTGACCGTGTCGGCCTTGCTTACTTCTTCTGAGCTTCAAATAGTGTTATTCTTCTTCTCTCTATATCTAGTAGCAGTTGCGCAAGGTGGACACAAGCCCTGTGTTCAGGCTTTAGGGGCAGATCAGTTTGATGGACAAGATCCAGAGGAGTGCAAAGCGAAAAGCTCATTCTTCAATTGGTGGTACTTTGGTATGAATGCAGGCATACTAGTGACATTCTCAGTATTGACCTACATACAGGACAATCTAAGCTGGGGTCTGGGTTTTGGAATTCCTTGTGTTGTGATGGTCCTTGCACTGATTATTTTTGTCAGTGGAACTAGGACATACCGGTATAGCATCCAAGGGGAGGAGGAAAGCCCATTTGTGAGGATTGGCAAGGTTTTTGTTGCTGCATTAAGGAACCGGCGAACTAGTCCTCCAGCAATAGCTTCTGAAGAAGAATCCCGTGGAACCTTGCCTGATCAAAGGTCTGAACCATTCAAGTTCCTCAACAAAGCCTTGCTTGCACCAGATAATTTGAAGAAAAAAGGAAGAACTATTGTGCCCGGTTTTGACATACCGGCTGCCTCACTTCAGTCATTTATCTGCCTTGCCATAATAATGATCATACCCATTTATGACCGCATCTTTGTTCCAATGGCAAAAGCTTTCACCAGAGAACTCTCTGGCATTACAATGCTACAAAGAATCGGAACTGGGATGTTTTTCTCTATCATATCTATGGTCGTTGCAGCTTTAGTTGAGATGAAAAGGCTCCAAACTGCCAAAGATTATGATCTGGTTGATCTGCCAAGTGCCACAATTCCAATGAGTATTTGGTGGTTGGTTCCTCAGTACTTTTTGTATGGACTAGCTGATGTTTTCACCATTGTTGGTCTACAAGAGTTCCTCTATGATCAGGTACCAAATGAATTAAGAAGCATGGGAATTGCTCTCTACCTCAGTATATTGGGTGTGGGAAACTTTCTGAGCAGCGTTCTTATCTCTATTATTGAGGAAGCAACCAGTTGGGGAGGCCACACTAGCTGGTTTTCGGACAACCTTAATCTTGCACATCTTGATTACTTTTACTGGTTACTAGCAGCACTCTCTGGAGTAGGATTGTTGGCCTACATGTATTTTGCAAAATCTTACATTTACAATAGGGCTAGTACAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PTR2

Protein Analysis

536

Amino Acids

59.31

Weight (kDa)

5.84

Isoelectric Point (pI)

41.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 80 - 395 8.5e-10 Major Facilitator Superfamily
PTR2 PF00854 133 - 317 1.4e-43 POT family
PTR2 PF00854 331 - 493 2.3e-35 POT family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000191)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22540
fragaria_vesca FvH4_5g31770 FvH4_5g31770 FvH4_5g31790 FvH4_5g31790 FvH4_5g31800 FvH4_5g31800 FvH4_5g31800 FvH4_5g31830 FvH4_5g31840 FvH4_5g31840 FvH4_6g12331
malus_domestica MD02G1288000.v1.1 MD02G1288200.v1.1 MD03G1076700.v1.1 MD07G1122800.v1.1 MD08G1218300.v1.1 MD15G1406500.v1.1 MD15G1406600.v1.1 MD15G1406700.v1.1
prunus_persica Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1 Prupe.7G017300_v2.0.a1
pyrus_communis pycom05g17900 pycom08g18920 pycom15g36290 pycom15g36300 pycom15g36310
rosa_chinensis RchiOBHm_Chr3g0482421 RchiOBHm_Chr4g0413471 RchiOBHm_Chr7g0227651 RchiOBHm_Chr7g0227661 RchiOBHm_Chr7g0227671 RchiOBHm_Chr7g0227681 RchiOBHm_Chr7g0227701 RchiOBHm_Chr7g0227711 RchiOBHm_Chr7g0227721 RchiOBHm_Chr7g0227731 RchiOBHm_Chr7g0227741 RchiOBHm_Chr7g0227761 RchiOBHm_Chr7g0227781 RchiOBHm_Chr7g0227791 RchiOBHm_Chr7g0227801 RchiOBHm_Chr7g0227861 RchiOBHm_Chr7g0227881
rosa_laevigata RLG00000001610 RLG00000001611 RLG00000001613 RLG00000001617 RLG00000001618 RLG00000001619 RLG00000001622 RLG00000001623 RLG00000001625 RLG00000001627 RLG00000001628 RLG00000001629 RLG00000001630 RLG00000008217
rosa_multiflora Rmu_co8446845.1_g000001 Rmu_co8488273.1_g000001 Rmu_sc0000347.1_g000023 Rmu_sc0000347.1_g000032 Rmu_sc0000347.1_g000038 Rmu_sc0000347.1_g000046 Rmu_sc0000347.1_g000047 Rmu_sc0000347.1_g000049 Rmu_sc0000347.1_g000050 Rmu_sc0000883.1_g000014 Rmu_sc0000883.1_g000015 Rmu_sc0001930.1_g000001 Rmu_sc0001930.1_g000006 Rmu_sc0005026.1_g000009 Rmu_sc0005026.1_g000013 Rmu_sc0005026.1_g000018 Rmu_sc0005026.1_g000021 Rmu_sc0005743.1_g000008 Rmu_sc0005743.1_g000010 Rmu_sc0010635.1_g000001 Rmu_sc0013384.1_g000001 Rmu_sc0013521.1_g000001 Rmu_sc0014985.1_g000003 Rmu_sc0022490.1_g000001 Rmu_sc0025092.1_g000001 Rmu_sc0036408.1_g000001
rosa_roxburghii Rroxscaffold_3G00231820 Rroxscaffold_3G00231860 Rroxscaffold_3G00231890 Rroxscaffold_3G00231910 Rroxscaffold_3G00231930 Rroxscaffold_3G00231940 Rroxscaffold_3G00231960 Rroxscaffold_3G00231970 Rroxscaffold_3G00231980 Rroxscaffold_5G00357370
rosa_rugosa Rorug03G0196300 Rorug04G0120600 Rorug07G0242700 Rorug07G0242800 Rorug07G0242900 Rorug07G0243000 Rorug07G0243100 Rorug07G0243200 Rorug07G0243400 Rorug07G0243600 Rorug07G0243800 Rorug07G0243900
rosa_samantha Rh3AG109500 Rh3AG248000 Rh3BG283000 Rh3CG114700 Rh3CG279600 Rh3DG275400 Rh3DG275500 Rh3DG275800 Rh4AG180200 Rh4BG179400 Rh4DG175400 Rh6AG297600 Rh6CG311000 Rh7AG396200 Rh7AG396300 Rh7AG396400 Rh7AG396600 Rh7AG397000 Rh7AG397100 Rh7BG377800 Rh7BG377900 Rh7BG378000 Rh7BG378100 Rh7BG378300 Rh7BG378400 Rh7BG378500 Rh7BG378800 Rh7BG378900 Rh7DG391900 Rh7DG392000 Rh7DG392300 Rh7DG392400 Rh7DG392700
rosa_wichuraiana Rw3G022320 Rw4G015000 Rw4G015060 Rw7G032940 Rw7G032950 Rw7G032960 Rw7G032970 Rw7G032980 Rw7G032990 Rw7G033000 Rw7G033010 Rw7G033020 Rw7G033030 Rw7G033050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 135
Acc16I TGCGCA 1 cut(s) 528
Acc65I GGTACC 1 cut(s) 1351
AccB1I GGYRCC 1 cut(s) 1351
AccI GTMKAC 3 cut(s) 138, 299, 1327
AccIII TCCGGA 1 cut(s) 335
AciI CCGC 8 cut(s) 189, 201, 230, 311, 314, 377, 400, 1072
AclI AACGTT 1 cut(s) 272
AclWI GGATC 2 cut(s) 171, 581
AcsI RAATTY 1 cut(s) 717
AcuI CTGAAG 2 cut(s) 903, 1007
AcyI GRCGYC 1 cut(s) 132
AfaI GTAC 4 cut(s) 632, 1286, 1353, 1603
AfiI CCNNNNNNNGG 5 cut(s) 61, 73, 192, 362, 796
AflIII ACRYGT 1 cut(s) 1563
AgeI ACCGGT 2 cut(s) 73, 777
AgsI TTSAA 4 cut(s) 485, 622, 931, 970
AhlI ACTAGT 2 cut(s) 655, 860
AloI GAACNNNNNNTCC 4 cut(s) 317, 349, 850, 882
AluBI AGCT 9 cut(s) 258, 481, 612, 699, 878, 1097, 1184, 1304, 1476
AluI AGCT 9 cut(s) 258, 481, 612, 699, 878, 1097, 1184, 1304, 1476
Alw26I GTCTC 1 cut(s) 101
AlwI GGATC 2 cut(s) 171, 581
Aor13HI TCCGGA 1 cut(s) 335
AoxI GGCC 6 cut(s) 63, 160, 284, 459, 1465, 1557
ApeKI GCWGC 5 cut(s) 839, 1013, 1181, 1422, 1532
ApoI RAATTY 1 cut(s) 717
ArsI GACNNNNNNTTYG 2 cut(s) 1061, 1093
AsiGI ACCGGT 2 cut(s) 73, 777
Asp718I GGTACC 1 cut(s) 1351
AspLEI GCGC 2 cut(s) 146, 529
AspS9I GGNCC 5 cut(s) 64, 169, 284, 333, 736
AsuC2I CCSGG 1 cut(s) 996
AsuHPI GGTGA 3 cut(s) 316, 1093, 1306
AvaII GGWCC 3 cut(s) 169, 333, 736
BaeGI GKGCMC 1 cut(s) 996
BaeI ACNNNNGTAYC 2 cut(s) 622, 655
BanI GGYRCC 1 cut(s) 1351
BbvI GCAGC 5 cut(s) 826, 1000, 1193, 1434, 1544
BccI CCATC 3 cut(s) 171, 572, 727
BceAI ACGGC 3 cut(s) 131, 271, 324
BclI TGATCA 3 cut(s) 910, 1053, 1345
BcnI CCSGG 1 cut(s) 996
BcoDI GTCTC 1 cut(s) 101
BcuI ACTAGT 2 cut(s) 655, 860
BfaI CTAG 8 cut(s) 515, 656, 768, 861, 1301, 1473, 1529, 1599
BfoI RGCGCY 1 cut(s) 147
BisI GCNGC 6 cut(s) 312, 840, 1014, 1182, 1423, 1533
BlsI GCNGC 6 cut(s) 313, 841, 1015, 1183, 1424, 1534
BmcAI AGTACT 1 cut(s) 1286
Bme1390I CCNGG 1 cut(s) 996
Bme18I GGWCC 3 cut(s) 169, 333, 736
BmgT120I GGNCC 5 cut(s) 64, 169, 284, 333, 736
BmiI GGNNCC 6 cut(s) 285, 851, 901, 1205, 1278, 1353
BmrFI CCNGG 1 cut(s) 996
BmrI ACTGGG 1 cut(s) 1155
BmsI GCATC 3 cut(s) 212, 795, 1083
BmuI ACTGGG 1 cut(s) 1155
BpmI CTGGAG 3 cut(s) 125, 852, 1563
BpuMI CCSGG 1 cut(s) 996
BsaBI GATNNNNATC 1 cut(s) 1224
BsaHI GRCGYC 1 cut(s) 132
BsaI GGTCTC 1 cut(s) 101
BsaJI CCNNGG 2 cut(s) 790, 895
BsaWI WCCGGW 4 cut(s) 73, 166, 335, 777
BsaXI ACNNNNNCTCC 4 cut(s) 357, 387, 850, 880
Bsc4I CCNNNNNNNGG 5 cut(s) 61, 73, 192, 362, 796
Bse118I RCCGGY 4 cut(s) 73, 777, 852, 1009
Bse1I ACTGG 3 cut(s) 1150, 1455, 1526
Bse8I GATNNNNATC 1 cut(s) 1224
BseAI TCCGGA 1 cut(s) 335
BseDI CCNNGG 2 cut(s) 790, 895
BseGI GGATG 4 cut(s) 163, 203, 786, 1155
BseJI GATNNNNATC 1 cut(s) 1224
BseLI CCNNNNNNNGG 5 cut(s) 61, 73, 192, 362, 796
BseMII CTCAG 5 cut(s) 468, 681, 1295, 1405, 1409
BseNI ACTGG 3 cut(s) 1150, 1455, 1526
BseRI GAGGAG 2 cut(s) 608, 812
BseSI GKGCMC 1 cut(s) 996
BseXI GCAGC 5 cut(s) 826, 1000, 1193, 1434, 1544
BseYI CCCAGC 1 cut(s) 699
Bsh1285I CGRYCG 1 cut(s) 394
BshFI GGCC 6 cut(s) 65, 162, 286, 461, 1467, 1559
BshNI GGYRCC 1 cut(s) 1351
BshTI ACCGGT 2 cut(s) 73, 777
BsiEI CGRYCG 1 cut(s) 394
BsiSI CCGG 8 cut(s) 74, 167, 186, 336, 778, 853, 996, 1010
BslFI GGGAC 2 cut(s) 306, 450
BslI CCNNNNNNNGG 5 cut(s) 61, 73, 192, 362, 796
BsmAI GTCTC 1 cut(s) 101
BsmFI GGGAC 2 cut(s) 306, 450
BsmI GAATGC 1 cut(s) 649
BsnI GGCC 6 cut(s) 65, 162, 286, 461, 1467, 1559
Bso31I GGTCTC 1 cut(s) 101
Bsp1286I GDGCHC 1 cut(s) 996
Bsp13I TCCGGA 1 cut(s) 335
Bsp143I GATC 8 cut(s) 176, 568, 586, 910, 1053, 1225, 1234, 1345
BspACI CCGC 8 cut(s) 189, 201, 230, 311, 314, 377, 400, 1072
BspANI GGCC 6 cut(s) 65, 162, 286, 461, 1467, 1559
BspCNI CTCAG 5 cut(s) 469, 680, 1294, 1404, 1410
BspEI TCCGGA 1 cut(s) 335
BspLI GGNNCC 6 cut(s) 285, 851, 901, 1205, 1278, 1353
BspPI GGATC 2 cut(s) 171, 581
BspT107I GGYRCC 1 cut(s) 1351
BspTNI GGTCTC 1 cut(s) 101
BsrFI RCCGGY 4 cut(s) 73, 777, 852, 1009
BsrI ACTGG 3 cut(s) 1150, 1455, 1526
BssAI RCCGGY 4 cut(s) 73, 777, 852, 1009
BssECI CCNNGG 2 cut(s) 790, 895
BssMI GATC 8 cut(s) 176, 568, 586, 910, 1053, 1225, 1234, 1345
BssNI GRCGYC 1 cut(s) 132
BssT1I CCWWGG 1 cut(s) 790
Bst4CI ACNGT 3 cut(s) 297, 304, 454
BstACI GRCGYC 1 cut(s) 132
BstC8I GCNNGC 2 cut(s) 649, 954
BstDEI CTNAG 6 cut(s) 477, 667, 695, 1281, 1391, 1418
BstDSI CCRYGG 1 cut(s) 895
BstF5I GGATG 4 cut(s) 163, 203, 786, 1155
BstH2I RGCGCY 1 cut(s) 147
BstHHI GCGC 2 cut(s) 146, 529
BstKTI GATC 8 cut(s) 179, 571, 589, 913, 1056, 1228, 1237, 1348
BstMAI GTCTC 1 cut(s) 101
BstMBI GATC 8 cut(s) 176, 568, 586, 910, 1053, 1225, 1234, 1345
BstMCI CGRYCG 1 cut(s) 394
BstMWI GCNNNNNNNGC 4 cut(s) 374, 563, 953, 1473
BstNSI RCATGY 1 cut(s) 1567
BstSCI CCNGG 1 cut(s) 994
BstSLI GKGCMC 1 cut(s) 996
BstV1I GCAGC 5 cut(s) 826, 1000, 1193, 1434, 1544
BstX2I RGATCY 2 cut(s) 176, 586
BstYI RGATCY 2 cut(s) 176, 586
BsuRI GGCC 6 cut(s) 65, 162, 286, 461, 1467, 1559
BtgI CCRYGG 1 cut(s) 895
BtsCI GGATG 4 cut(s) 163, 203, 786, 1155
BtsIMutI CAGTG 2 cut(s) 743, 766
Cac8I GCNNGC 2 cut(s) 649, 954
CfoI GCGC 2 cut(s) 146, 529
Cfr10I RCCGGY 4 cut(s) 73, 777, 852, 1009
Cfr13I GGNCC 5 cut(s) 64, 169, 284, 333, 736
Csp6I GTAC 4 cut(s) 631, 1285, 1352, 1602
CspAI ACCGGT 2 cut(s) 73, 777
CviAII CATG 3 cut(s) 27, 1372, 1564
CviQI GTAC 4 cut(s) 631, 1285, 1352, 1602
DdeI CTNAG 6 cut(s) 477, 667, 695, 1281, 1391, 1418
DpnI GATC 8 cut(s) 178, 570, 588, 912, 1055, 1227, 1236, 1347
DpnII GATC 8 cut(s) 176, 568, 586, 910, 1053, 1225, 1234, 1345
EciI GGCGGA 2 cut(s) 329, 392
Eco130I CCWWGG 1 cut(s) 790
Eco31I GGTCTC 1 cut(s) 101
Eco47I GGWCC 3 cut(s) 169, 333, 736
Eco57I CTGAAG 2 cut(s) 903, 1007
EcoRI GAATTC 1 cut(s) 717
EcoT14I CCWWGG 1 cut(s) 790
ErhI CCWWGG 1 cut(s) 790
FaeI CATG 3 cut(s) 30, 1375, 1567
FalI AAGNNNNNCTT 2 cut(s) 936, 968
FaqI GGGAC 2 cut(s) 306, 450
FatI CATG 3 cut(s) 26, 1371, 1563
FauNDI CATATG 1 cut(s) 329
FbaI TGATCA 3 cut(s) 910, 1053, 1345
FblI GTMKAC 3 cut(s) 138, 299, 1327
Fnu4HI GCNGC 6 cut(s) 312, 840, 1014, 1182, 1423, 1533
FokI GGATG 4 cut(s) 150, 190, 773, 1162
Fsp4HI GCNGC 6 cut(s) 312, 840, 1014, 1182, 1423, 1533
FspBI CTAG 8 cut(s) 515, 656, 768, 861, 1301, 1473, 1529, 1599
FspI TGCGCA 1 cut(s) 528
GlaI GCGC 2 cut(s) 145, 528
GluI GCNGC 6 cut(s) 312, 840, 1014, 1182, 1423, 1533
GsaI CCCAGC 1 cut(s) 703
GsuI CTGGAG 3 cut(s) 125, 852, 1563
HaeII RGCGCY 1 cut(s) 147
HaeIII GGCC 6 cut(s) 65, 162, 286, 461, 1467, 1559
HapII CCGG 8 cut(s) 74, 167, 186, 336, 778, 853, 996, 1010
HhaI GCGC 2 cut(s) 146, 529
Hin1I GRCGYC 1 cut(s) 132
Hin1II CATG 3 cut(s) 30, 1375, 1567
Hin6I GCGC 2 cut(s) 144, 527
HinP1I GCGC 2 cut(s) 144, 527
HincII GTYRAC 3 cut(s) 151, 300, 450
HindII GTYRAC 3 cut(s) 151, 300, 450
HindIII AAGCTT 1 cut(s) 1095
HinfI GANTC 5 cut(s) 98, 380, 438, 890, 1137
HpaII CCGG 8 cut(s) 74, 167, 186, 336, 778, 853, 996, 1010
HphI GGTGA 3 cut(s) 316, 1093, 1306
Hpy166II GTNNAC 8 cut(s) 139, 151, 172, 300, 325, 450, 536, 1328
Hpy188I TCNGA 8 cut(s) 267, 279, 478, 883, 922, 1142, 1419, 1486
Hpy188III TCNNGA 6 cut(s) 92, 104, 336, 590, 1508, 1542
Hpy8I GTNNAC 8 cut(s) 139, 151, 172, 300, 325, 450, 536, 1328
Hpy99I CGWCG 3 cut(s) 134, 137, 304
HpyAV CCTTC 1 cut(s) 217
HpyCH4III ACNGT 3 cut(s) 297, 304, 454
HpyCH4IV ACGT 3 cut(s) 12, 132, 272
HpyCH4V TGCA 8 cut(s) 600, 647, 743, 842, 956, 1181, 1502, 1574
HpyF10VI GCNNNNNNNGC 4 cut(s) 374, 563, 953, 1473
HpyF3I CTNAG 6 cut(s) 477, 667, 695, 1281, 1391, 1418
HpySE526I ACGT 3 cut(s) 12, 132, 272
Hsp92I GRCGYC 1 cut(s) 132
Hsp92II CATG 3 cut(s) 30, 1375, 1567
HspAI GCGC 2 cut(s) 144, 527
Kpn2I TCCGGA 1 cut(s) 335
KpnI GGTACC 1 cut(s) 1355
Ksp22I TGATCA 3 cut(s) 910, 1053, 1345
Kzo9I GATC 8 cut(s) 176, 568, 586, 910, 1053, 1225, 1234, 1345
LmnI GCTCC 3 cut(s) 263, 365, 1209
Lsp1109I GCAGC 5 cut(s) 826, 1000, 1193, 1434, 1544
LweI GCATC 3 cut(s) 212, 795, 1083
MaeI CTAG 8 cut(s) 515, 656, 768, 861, 1301, 1473, 1529, 1599
MaeII ACGT 3 cut(s) 12, 132, 272
MaeIII GTNAC 3 cut(s) 304, 658, 1524
MalI GATC 8 cut(s) 178, 570, 588, 912, 1055, 1227, 1236, 1347
MboI GATC 8 cut(s) 176, 568, 586, 910, 1053, 1225, 1234, 1345
MboII GAAGA 9 cut(s) 107, 465, 490, 493, 610, 896, 899, 982, 993
MfeI CAATTG 1 cut(s) 622
MflI RGATCY 2 cut(s) 176, 586
MhlI GDGCHC 1 cut(s) 996
MluCI AATT 6 cut(s) 622, 717, 964, 1251, 1361, 1377
MlyI GAGTC 1 cut(s) 432
MroI TCCGGA 1 cut(s) 335
MseI TTAA 3 cut(s) 845, 1364, 1494
MslI CAYNNNNRTG 4 cut(s) 656, 1049, 1124, 1169
MspI CCGG 8 cut(s) 74, 167, 186, 336, 778, 853, 996, 1010
MspR9I CCNGG 1 cut(s) 996
MunI CAATTG 1 cut(s) 622
Mva1269I GAATGC 1 cut(s) 649
MwoI GCNNNNNNNGC 4 cut(s) 374, 563, 953, 1473
NciI CCSGG 1 cut(s) 996
NdeI CATATG 1 cut(s) 329
NdeII GATC 8 cut(s) 176, 568, 586, 910, 1053, 1225, 1234, 1345
NlaIII CATG 3 cut(s) 30, 1375, 1567
NlaIV GGNNCC 6 cut(s) 285, 851, 901, 1205, 1278, 1353
NmeAIII GCCGAG 2 cut(s) 41, 420
NmuCI GTSAC 2 cut(s) 304, 658
NsbI TGCGCA 1 cut(s) 528
NspI RCATGY 1 cut(s) 1567
PciI ACATGT 1 cut(s) 1563
PctI GAATGC 1 cut(s) 649
PfeI GAWTC 4 cut(s) 98, 380, 890, 1137
PflFI GACNNNGTC 2 cut(s) 131, 454
PinAI ACCGGT 2 cut(s) 73, 777
PkrI GCNGC 6 cut(s) 313, 841, 1015, 1183, 1424, 1534
PleI GAGTC 1 cut(s) 432
PpsI GAGTC 1 cut(s) 432
PscI ACATGT 1 cut(s) 1563
Psp1406I AACGTT 1 cut(s) 272
PspFI CCCAGC 1 cut(s) 699
PspN4I GGNNCC 6 cut(s) 285, 851, 901, 1205, 1278, 1353
PspPI GGNCC 5 cut(s) 64, 169, 284, 333, 736
PsuI RGATCY 2 cut(s) 176, 586
PsyI GACNNNGTC 2 cut(s) 131, 454
RsaI GTAC 4 cut(s) 632, 1286, 1353, 1603
RsaNI GTAC 4 cut(s) 631, 1285, 1352, 1602
RseI CAYNNNNRTG 4 cut(s) 656, 1049, 1124, 1169
SalI GTCGAC 1 cut(s) 298
SaqAI TTAA 3 cut(s) 845, 1364, 1494
SatI GCNGC 6 cut(s) 312, 840, 1014, 1182, 1423, 1533
Sau3AI GATC 8 cut(s) 176, 568, 586, 910, 1053, 1225, 1234, 1345
Sau96I GGNCC 5 cut(s) 64, 169, 284, 333, 736
ScaI AGTACT 1 cut(s) 1286
SchI GAGTC 1 cut(s) 432
ScrFI CCNGG 1 cut(s) 996
SduI GDGCHC 1 cut(s) 996
SfaNI GCATC 3 cut(s) 212, 795, 1083
SinI GGWCC 3 cut(s) 169, 333, 736
SmiMI CAYNNNNRTG 4 cut(s) 656, 1049, 1124, 1169
SpeI ACTAGT 2 cut(s) 655, 860
Sse9I AATT 6 cut(s) 622, 717, 964, 1251, 1361, 1377
SsiI CCGC 8 cut(s) 189, 201, 230, 311, 314, 377, 400, 1072
SspMI CTAG 8 cut(s) 515, 656, 768, 861, 1301, 1473, 1529, 1599
StyD4I CCNGG 1 cut(s) 994
StyI CCWWGG 1 cut(s) 790
TaaI ACNGT 3 cut(s) 297, 304, 454
TaiI ACGT 3 cut(s) 15, 135, 275
TaqI TCGA 2 cut(s) 93, 299
TaqII GACCGA 1 cut(s) 380
TasI AATT 6 cut(s) 622, 717, 964, 1251, 1361, 1377
TatI WGTACW 2 cut(s) 1284, 1601
TauI GCSGC 1 cut(s) 314
TfiI GAWTC 4 cut(s) 98, 380, 890, 1137
Tru1I TTAA 3 cut(s) 845, 1364, 1494
Tru9I TTAA 3 cut(s) 845, 1364, 1494
TscAI CASTG 2 cut(s) 750, 766
TseFI GTSAC 2 cut(s) 304, 658
TseI GCWGC 5 cut(s) 839, 1013, 1181, 1422, 1532
Tsp45I GTSAC 2 cut(s) 304, 658
TspDTI ATGAA 4 cut(s) 199, 656, 1211, 1374
TspGWI ACGGA 1 cut(s) 58
TspRI CASTG 2 cut(s) 750, 766
Tth111I GACNNNGTC 2 cut(s) 131, 454
VpaK11BI GGWCC 3 cut(s) 169, 333, 736
XapI RAATTY 1 cut(s) 717
XceI RCATGY 1 cut(s) 1567
XcmI CCANNNNNNNNNTGG 1 cut(s) 1263
XmiI GTMKAC 3 cut(s) 138, 299, 1327
XspI CTAG 8 cut(s) 515, 656, 768, 861, 1301, 1473, 1529, 1599
ZraI GACGTC 1 cut(s) 133
ZrmI AGTACT 1 cut(s) 1286
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.