Rroxscaffold_102G00450940

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000102
OG0000104
Physical Location & Seq
Reverse (-)
18319 .. 19135
817 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_102G00450940.1

Sequence Viewer

Length: 615 bp
ATGGCGCTTAAGCGCGTGACCTATACCGGCCGTCGGGGCAAGTGCCGAGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACACAGGGCGTGAGCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGGTCCGGCGGCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCGGTCTCCAAGGTGAACGACCTGCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGGCTGGGCACGGGGGTCCCGATCCCGAACCCGTCGGCTGTCGGTGAAGCTGCTCGAGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACGGGAACGCTCCTTCGGGGGCTTTCCCCGGGCGTTCAACGGTCGACTCGGGCTGGTACGGACAAGGGGAATCCGATTGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

204

Amino Acids

22.26

Weight (kDa)

11.31

Isoelectric Point (pI)

49.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 351
AccBSI CCGCTC 2 cut(s) 110, 499
AccI GTMKAC 1 cut(s) 571
AccII CGCG 5 cut(s) 15, 70, 241, 490, 509
AccIII TCCGGA 1 cut(s) 277
AclWI GGATC 3 cut(s) 382, 395, 436
AcoI YGGCCR 3 cut(s) 28, 111, 515
AfaI GTAC 2 cut(s) 309, 585
AfiI CCNNNNNNNGG 5 cut(s) 33, 175, 513, 520, 524
AflII CTTAAG 1 cut(s) 8
AgsI TTSAA 4 cut(s) 150, 164, 272, 565
AhdI GACNNNNNGTC 1 cut(s) 346
AjiI CACGTC 1 cut(s) 237
AluBI AGCT 2 cut(s) 470, 481
AluI AGCT 2 cut(s) 470, 481
Alw21I GWGCWC 1 cut(s) 231
Alw26I GTCTC 1 cut(s) 331
AlwI GGATC 3 cut(s) 382, 395, 436
Ama87I CYCGRG 4 cut(s) 398, 474, 555, 575
Aor13HI TCCGGA 1 cut(s) 277
AoxI GGCC 5 cut(s) 28, 111, 166, 264, 515
ApeKI GCWGC 4 cut(s) 79, 414, 470, 481
AspLEI GCGC 4 cut(s) 7, 15, 70, 257
AspS9I GGNCC 4 cut(s) 212, 265, 283, 436
AsuC2I CCSGG 5 cut(s) 102, 260, 519, 556, 557
AsuHPI GGTGA 2 cut(s) 346, 476
AvaI CYCGRG 4 cut(s) 398, 474, 555, 575
AvaII GGWCC 3 cut(s) 212, 283, 436
BaeGI GKGCMC 1 cut(s) 431
BamHI GGATCC 1 cut(s) 387
BanII GRGCYC 1 cut(s) 52
Bbv12I GWGCWC 1 cut(s) 231
BbvI GCAGC 4 cut(s) 66, 401, 457, 468
BceAI ACGGC 3 cut(s) 15, 98, 211
BcnI CCSGG 5 cut(s) 102, 260, 519, 556, 557
BcoDI GTCTC 1 cut(s) 331
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 8
BfuAI ACCTGC 1 cut(s) 351
BglI GCCNNNNNGGC 2 cut(s) 36, 263
BglII AGATCT 1 cut(s) 124
Bme1390I CCNGG 5 cut(s) 102, 260, 519, 556, 557
Bme18I GGWCC 3 cut(s) 212, 283, 436
BmeRI GACNNNNNGTC 1 cut(s) 346
BmeT110I CYCGRG 4 cut(s) 398, 474, 555, 575
BmgBI CACGTC 1 cut(s) 237
BmgT120I GGNCC 4 cut(s) 212, 265, 283, 436
BmiI GGNNCC 5 cut(s) 185, 213, 389, 437, 438
BmrFI CCNGG 5 cut(s) 102, 260, 519, 556, 557
BmsI GCATC 1 cut(s) 329
BpuMI CCSGG 5 cut(s) 102, 260, 519, 556, 557
BsaI GGTCTC 1 cut(s) 331
BsaJI CCNNGG 7 cut(s) 258, 330, 397, 488, 518, 554, 555
BsaWI WCCGGW 2 cut(s) 249, 277
BsaXI ACNNNNNCTCC 2 cut(s) 99, 129
Bsc4I CCNNNNNNNGG 5 cut(s) 33, 175, 513, 520, 524
Bse118I RCCGGY 3 cut(s) 26, 301, 513
BseAI TCCGGA 1 cut(s) 277
BseDI CCNNGG 7 cut(s) 258, 330, 397, 488, 518, 554, 555
BseLI CCNNNNNNNGG 5 cut(s) 33, 175, 513, 520, 524
BseSI GKGCMC 1 cut(s) 431
BseX3I CGGCCG 3 cut(s) 28, 111, 515
BseXI GCAGC 4 cut(s) 66, 401, 457, 468
BseYI CCCAGC 1 cut(s) 424
BsgI GTGCAG 1 cut(s) 141
Bsh1236I CGCG 5 cut(s) 15, 70, 241, 490, 509
Bsh1285I CGRYCG 6 cut(s) 31, 77, 114, 306, 518, 571
BshFI GGCC 5 cut(s) 30, 113, 168, 266, 517
BsiEI CGRYCG 6 cut(s) 31, 77, 114, 306, 518, 571
BsiHKAI GWGCWC 1 cut(s) 231
BsiHKCI CYCGRG 4 cut(s) 398, 474, 555, 575
BslFI GGGAC 2 cut(s) 422, 536
BslI CCNNNNNNNGG 5 cut(s) 33, 175, 513, 520, 524
BsmAI GTCTC 1 cut(s) 331
BsmFI GGGAC 2 cut(s) 422, 536
BsnI GGCC 5 cut(s) 30, 113, 168, 266, 517
Bso31I GGTCTC 1 cut(s) 331
BsoBI CYCGRG 4 cut(s) 398, 474, 555, 575
Bsp1286I GDGCHC 3 cut(s) 52, 231, 431
Bsp13I TCCGGA 1 cut(s) 277
Bsp143I GATC 3 cut(s) 124, 387, 441
BspANI GGCC 5 cut(s) 30, 113, 168, 266, 517
BspEI TCCGGA 1 cut(s) 277
BspFNI CGCG 5 cut(s) 15, 70, 241, 490, 509
BspLI GGNNCC 5 cut(s) 185, 213, 389, 437, 438
BspMI ACCTGC 1 cut(s) 351
BspPI GGATC 3 cut(s) 382, 395, 436
BspQI GCTCTTC 1 cut(s) 219
BspTI CTTAAG 1 cut(s) 8
BspTNI GGTCTC 1 cut(s) 331
BsrBI CCGCTC 2 cut(s) 110, 499
BsrFI RCCGGY 3 cut(s) 26, 301, 513
BssAI RCCGGY 3 cut(s) 26, 301, 513
BssECI CCNNGG 7 cut(s) 258, 330, 397, 488, 518, 554, 555
BssMI GATC 3 cut(s) 124, 387, 441
BssT1I CCWWGG 1 cut(s) 330
Bst4CI ACNGT 1 cut(s) 569
Bst6I CTCTTC 2 cut(s) 166, 219
BstAFI CTTAAG 1 cut(s) 8
BstC8I GCNNGC 2 cut(s) 511, 515
BstDSI CCRYGG 1 cut(s) 488
BstFNI CGCG 5 cut(s) 15, 70, 241, 490, 509
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 4 cut(s) 7, 15, 70, 257
BstKTI GATC 3 cut(s) 127, 390, 444
BstMAI GTCTC 1 cut(s) 331
BstMBI GATC 3 cut(s) 124, 387, 441
BstMCI CGRYCG 6 cut(s) 31, 77, 114, 306, 518, 571
BstMWI GCNNNNNNNGC 9 cut(s) 36, 76, 79, 119, 263, 298, 487, 490, 496
BstSCI CCNGG 5 cut(s) 100, 258, 517, 554, 555
BstSLI GKGCMC 1 cut(s) 431
BstUI CGCG 5 cut(s) 15, 70, 241, 490, 509
BstV1I GCAGC 4 cut(s) 66, 401, 457, 468
BstX2I RGATCY 2 cut(s) 124, 387
BstYI RGATCY 2 cut(s) 124, 387
BstZI CGGCCG 3 cut(s) 28, 111, 515
BsuRI GGCC 5 cut(s) 30, 113, 168, 266, 517
BtgI CCRYGG 1 cut(s) 488
BtrI CACGTC 1 cut(s) 237
BveI ACCTGC 1 cut(s) 351
Cac8I GCNNGC 2 cut(s) 511, 515
CfoI GCGC 4 cut(s) 7, 15, 70, 257
Cfr10I RCCGGY 3 cut(s) 26, 301, 513
Cfr13I GGNCC 4 cut(s) 212, 265, 283, 436
Cfr42I CCGCGG 1 cut(s) 491
Cfr9I CCCGGG 1 cut(s) 555
Csp6I GTAC 2 cut(s) 308, 584
CviAII CATG 2 cut(s) 188, 207
CviQI GTAC 2 cut(s) 308, 584
DpnI GATC 3 cut(s) 126, 389, 443
DpnII GATC 3 cut(s) 124, 387, 441
DriI GACNNNNNGTC 1 cut(s) 346
EaeI YGGCCR 3 cut(s) 28, 111, 515
EagI CGGCCG 3 cut(s) 28, 111, 515
Eam1104I CTCTTC 2 cut(s) 166, 219
Eam1105I GACNNNNNGTC 1 cut(s) 346
EarI CTCTTC 2 cut(s) 166, 219
EciI GGCGGA 2 cut(s) 120, 236
EclXI CGGCCG 3 cut(s) 28, 111, 515
Eco130I CCWWGG 1 cut(s) 330
Eco24I GRGCYC 1 cut(s) 52
Eco31I GGTCTC 1 cut(s) 331
Eco47I GGWCC 3 cut(s) 212, 283, 436
Eco52I CGGCCG 3 cut(s) 28, 111, 515
Eco88I CYCGRG 4 cut(s) 398, 474, 555, 575
EcoO109I RGGNCCY 1 cut(s) 436
EcoT14I CCWWGG 1 cut(s) 330
EcoT38I GRGCYC 1 cut(s) 52
ErhI CCWWGG 1 cut(s) 330
FaeI CATG 2 cut(s) 191, 210
FaiI YATR 4 cut(s) 24, 189, 208, 314
FaqI GGGAC 2 cut(s) 422, 536
FatI CATG 2 cut(s) 187, 206
FauI CCCGC 1 cut(s) 492
FblI GTMKAC 1 cut(s) 571
FriOI GRGCYC 1 cut(s) 52
GlaI GCGC 4 cut(s) 6, 14, 69, 256
GsaI CCCAGC 1 cut(s) 428
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 5 cut(s) 30, 113, 168, 266, 517
HhaI GCGC 4 cut(s) 7, 15, 70, 257
Hin1II CATG 2 cut(s) 191, 210
Hin6I GCGC 4 cut(s) 5, 13, 68, 255
HinP1I GCGC 4 cut(s) 5, 13, 68, 255
HincII GTYRAC 1 cut(s) 572
HindII GTYRAC 1 cut(s) 572
HinfI GANTC 2 cut(s) 573, 597
HphI GGTGA 2 cut(s) 346, 476
Hpy166II GTNNAC 3 cut(s) 193, 337, 572
Hpy188I TCNGA 1 cut(s) 602
Hpy188III TCNNGA 5 cut(s) 278, 400, 439, 445, 476
Hpy8I GTNNAC 3 cut(s) 193, 337, 572
Hpy99I CGWCG 4 cut(s) 36, 119, 241, 457
HpyAV CCTTC 2 cut(s) 158, 550
HpyCH4III ACNGT 1 cut(s) 569
HpyCH4IV ACGT 1 cut(s) 236
HpyCH4V TGCA 3 cut(s) 82, 122, 204
HpyF10VI GCNNNNNNNGC 9 cut(s) 36, 76, 79, 119, 263, 298, 487, 490, 496
HpySE526I ACGT 1 cut(s) 236
Hsp92II CATG 2 cut(s) 191, 210
HspAI GCGC 4 cut(s) 5, 13, 68, 255
KflI GGGWCCC 1 cut(s) 436
Kpn2I TCCGGA 1 cut(s) 277
KroI GCCGGC 1 cut(s) 513
KroNI GCCGGC 1 cut(s) 515
KspI CCGCGG 1 cut(s) 491
Kzo9I GATC 3 cut(s) 124, 387, 441
LguI GCTCTTC 1 cut(s) 219
LmnI GCTCC 2 cut(s) 107, 542
Lsp1109I GCAGC 4 cut(s) 66, 401, 457, 468
LweI GCATC 1 cut(s) 329
MaeII ACGT 1 cut(s) 236
MaeIII GTNAC 2 cut(s) 16, 392
MalI GATC 3 cut(s) 126, 389, 443
MbiI CCGCTC 2 cut(s) 110, 499
MboI GATC 3 cut(s) 124, 387, 441
MboII GAAGA 2 cut(s) 183, 236
MflI RGATCY 2 cut(s) 124, 387
MhlI GDGCHC 3 cut(s) 52, 231, 431
MluCI AATT 1 cut(s) 610
MlyI GAGTC 1 cut(s) 567
MnlI CCTC 5 cut(s) 57, 167, 274, 407, 412
MroI TCCGGA 1 cut(s) 277
MroNI GCCGGC 1 cut(s) 513
MseI TTAA 3 cut(s) 9, 609, 613
MspA1I CMGCKG 1 cut(s) 490
MspCI CTTAAG 1 cut(s) 8
MspR9I CCNGG 5 cut(s) 102, 260, 519, 556, 557
MvnI CGCG 5 cut(s) 15, 70, 241, 490, 509
MwoI GCNNNNNNNGC 9 cut(s) 36, 76, 79, 119, 263, 298, 487, 490, 496
NaeI GCCGGC 1 cut(s) 515
NciI CCSGG 5 cut(s) 102, 260, 519, 556, 557
NdeII GATC 3 cut(s) 124, 387, 441
NgoMIV GCCGGC 1 cut(s) 513
NlaIII CATG 2 cut(s) 191, 210
NlaIV GGNNCC 5 cut(s) 185, 213, 389, 437, 438
NmeAIII GCCGAG 1 cut(s) 71
NmuCI GTSAC 1 cut(s) 16
PacI TTAATTAA 1 cut(s) 613
PaeR7I CTCGAG 1 cut(s) 474
PciSI GCTCTTC 1 cut(s) 219
PcsI WCGNNNNNNNCGW 1 cut(s) 437
PdiI GCCGGC 1 cut(s) 515
PfeI GAWTC 1 cut(s) 597
PleI GAGTC 1 cut(s) 567
PpsI GAGTC 1 cut(s) 567
PpuMI RGGWCCY 1 cut(s) 436
Psp5II RGGWCCY 1 cut(s) 436
PspFI CCCAGC 1 cut(s) 424
PspN4I GGNNCC 5 cut(s) 185, 213, 389, 437, 438
PspPI GGNCC 4 cut(s) 212, 265, 283, 436
PspPPI RGGWCCY 1 cut(s) 436
PsuI RGATCY 2 cut(s) 124, 387
RsaI GTAC 2 cut(s) 309, 585
RsaNI GTAC 2 cut(s) 308, 584
SacII CCGCGG 1 cut(s) 491
SalI GTCGAC 1 cut(s) 570
SapI GCTCTTC 1 cut(s) 219
SaqAI TTAA 3 cut(s) 9, 609, 613
Sau3AI GATC 3 cut(s) 124, 387, 441
Sau96I GGNCC 4 cut(s) 212, 265, 283, 436
SchI GAGTC 1 cut(s) 567
ScrFI CCNGG 5 cut(s) 102, 260, 519, 556, 557
SduI GDGCHC 3 cut(s) 52, 231, 431
SetI ASST 8 cut(s) 23, 185, 239, 336, 345, 399, 472, 483
SfaNI GCATC 1 cut(s) 329
Sfr274I CTCGAG 1 cut(s) 474
Sfr303I CCGCGG 1 cut(s) 491
SgrBI CCGCGG 1 cut(s) 491
SinI GGWCC 3 cut(s) 212, 283, 436
SlaI CTCGAG 1 cut(s) 474
SmaI CCCGGG 1 cut(s) 557
SmlI CTYRAG 2 cut(s) 8, 474
SmoI CTYRAG 2 cut(s) 8, 474
Sse9I AATT 1 cut(s) 610
SspI AATATT 1 cut(s) 146
StyD4I CCNGG 5 cut(s) 100, 258, 517, 554, 555
StyI CCWWGG 1 cut(s) 330
TaaI ACNGT 1 cut(s) 569
TaiI ACGT 1 cut(s) 239
TaqI TCGA 2 cut(s) 475, 571
TaqII GACCGA 2 cut(s) 300, 313
TasI AATT 1 cut(s) 610
TauI GCSGC 6 cut(s) 73, 113, 221, 266, 493, 509
TfiI GAWTC 1 cut(s) 597
Tru1I TTAA 3 cut(s) 9, 609, 613
Tru9I TTAA 3 cut(s) 9, 609, 613
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 4 cut(s) 79, 414, 470, 481
Tsp45I GTSAC 1 cut(s) 16
TspGWI ACGGA 3 cut(s) 380, 540, 601
TspMI CCCGGG 1 cut(s) 555
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 3 cut(s) 212, 283, 436
XhoI CTCGAG 1 cut(s) 474
XmaI CCCGGG 1 cut(s) 555
XmiI GTMKAC 1 cut(s) 571
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.