Rroxscaffold_91G00442980

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000091
OG0000104
Physical Location & Seq
Reverse (-)
12728 .. 14082
1355 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_91G00442980.1

Sequence Viewer

Length: 549 bp
ATGAAAGAGCGTTCCCCGCCGTCCGGAGACGGTGATCGTGCGGGTGGTTTCGTCGTCTTCAATATGTCTAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGGAAGCGGATGGGGGCGGCGATGCGCCTCGGTCGGATGTGGAACGGTCACAAGCCGGTCCGCCACTCGACTCGGGGCGTGGACCGTTACGGATTGCGGCGGCGGCCAAAGCCGGGCTGTTGATATGCCGTGGAGACGTCGTCGACGCGATCATGGTAGGCGGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCTGGAAGCTAATGTGCGGGATCCCTTTGCGGGTGCACCGCCGACCGACCTTGATCTTCGAGAAGGGTTCGAGTGTGAGCATGCACTGTCGGGACCGAAAGATGGTGAACTATGCACGAGCGGGGCGAAGCCGAGAGGAAACTACGCGGTGGAGGCCCGCGGCGATGCGACGTGCAAATCGTTCGTCGACTTGGGTATAGGGGCGAAAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

182

Amino Acids

18.95

Weight (kDa)

6.15

Isoelectric Point (pI)

39.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 276
AccBSI CCGCTC 1 cut(s) 456
AccI GTMKAC 2 cut(s) 279, 522
AccII CGCG 3 cut(s) 284, 482, 495
AccIII TCCGGA 1 cut(s) 23
AclWI GGATC 2 cut(s) 350, 363
AcoI YGGCCR 1 cut(s) 240
AcyI GRCGYC 1 cut(s) 273
AfiI CCNNNNNNNGG 4 cut(s) 23, 249, 365, 437
AgsI TTSAA 1 cut(s) 61
AjiI CACGTC 1 cut(s) 507
AluBI AGCT 1 cut(s) 344
AluI AGCT 1 cut(s) 344
Alw21I GWGCWC 2 cut(s) 337, 373
Alw26I GTCTC 3 cut(s) 21, 264, 314
Alw44I GTGCAC 1 cut(s) 369
AlwI GGATC 2 cut(s) 350, 363
Ama87I CYCGRG 1 cut(s) 208
Aor13HI TCCGGA 1 cut(s) 23
AoxI GGCC 2 cut(s) 240, 489
ApaLI GTGCAC 1 cut(s) 369
ArsI GACNNNNNNTTYG 2 cut(s) 504, 536
AspLEI GCGC 2 cut(s) 163, 306
AspS9I GGNCC 4 cut(s) 194, 218, 428, 490
AsuC2I CCSGG 1 cut(s) 250
AsuHPI GGTGA 2 cut(s) 44, 452
AvaI CYCGRG 1 cut(s) 208
AvaII GGWCC 3 cut(s) 194, 218, 428
BaeGI GKGCMC 1 cut(s) 373
BamHI GGATCC 1 cut(s) 355
BauI CACGAG 1 cut(s) 451
BbsI GAAGAC 1 cut(s) 49
Bbv12I GWGCWC 2 cut(s) 337, 373
BccI CCATC 2 cut(s) 140, 431
BceAI ACGGC 3 cut(s) 4, 249, 291
BcgI CGANNNNNNTGC 2 cut(s) 499, 533
BcnI CCSGG 1 cut(s) 250
BcoDI GTCTC 3 cut(s) 21, 264, 314
BglI GCCNNNNNGGC 1 cut(s) 312
BisI GCNGC 6 cut(s) 154, 234, 237, 240, 298, 496
BlsI GCNGC 6 cut(s) 155, 235, 238, 241, 299, 497
Bme1390I CCNGG 1 cut(s) 250
Bme18I GGWCC 3 cut(s) 194, 218, 428
BmeT110I CYCGRG 1 cut(s) 208
BmgBI CACGTC 1 cut(s) 507
BmgT120I GGNCC 4 cut(s) 194, 218, 428, 490
BmiI GGNNCC 2 cut(s) 357, 429
BmrFI CCNGG 1 cut(s) 250
BmsI GCATC 4 cut(s) 113, 148, 334, 490
BpiI GAAGAC 1 cut(s) 49
BpuMI CCSGG 1 cut(s) 250
Bsa29I ATCGAT 1 cut(s) 107
BsaHI GRCGYC 1 cut(s) 273
BsaJI CCNNGG 3 cut(s) 164, 265, 493
BsaWI WCCGGW 1 cut(s) 23
BsaXI ACNNNNNCTCC 2 cut(s) 261, 291
Bsc4I CCNNNNNNNGG 4 cut(s) 23, 249, 365, 437
Bse118I RCCGGY 1 cut(s) 191
BseAI TCCGGA 1 cut(s) 23
BseCI ATCGAT 1 cut(s) 107
BseDI CCNNGG 3 cut(s) 164, 265, 493
BseGI GGATG 2 cut(s) 151, 178
BseLI CCNNNNNNNGG 4 cut(s) 23, 249, 365, 437
BseSI GKGCMC 1 cut(s) 373
Bsh1236I CGCG 3 cut(s) 284, 482, 495
Bsh1285I CGRYCG 2 cut(s) 170, 381
BshFI GGCC 2 cut(s) 242, 491
BshVI ATCGAT 1 cut(s) 107
BsiEI CGRYCG 2 cut(s) 170, 381
BsiHKAI GWGCWC 2 cut(s) 337, 373
BsiHKCI CYCGRG 1 cut(s) 208
BsiSI CCGG 3 cut(s) 24, 192, 249
BslFI GGGAC 1 cut(s) 441
BslI CCNNNNNNNGG 4 cut(s) 23, 249, 365, 437
BsmAI GTCTC 3 cut(s) 21, 264, 314
BsmBI CGTCTC 3 cut(s) 21, 264, 314
BsmFI GGGAC 1 cut(s) 441
BsnI GGCC 2 cut(s) 242, 491
BsoBI CYCGRG 1 cut(s) 208
Bsp1286I GDGCHC 2 cut(s) 337, 373
Bsp13I TCCGGA 1 cut(s) 23
Bsp143I GATC 4 cut(s) 34, 285, 355, 388
BspANI GGCC 2 cut(s) 242, 491
BspDI ATCGAT 1 cut(s) 107
BspEI TCCGGA 1 cut(s) 23
BspFNI CGCG 3 cut(s) 284, 482, 495
BspLI GGNNCC 2 cut(s) 357, 429
BspPI GGATC 2 cut(s) 350, 363
BsrBI CCGCTC 1 cut(s) 456
BsrFI RCCGGY 1 cut(s) 191
BssAI RCCGGY 1 cut(s) 191
BssECI CCNNGG 3 cut(s) 164, 265, 493
BssMI GATC 4 cut(s) 34, 285, 355, 388
BssNI GRCGYC 1 cut(s) 273
BssSI CACGAG 1 cut(s) 451
Bst2BI CACGAG 1 cut(s) 451
Bst4CI ACNGT 4 cut(s) 32, 183, 222, 423
BstACI GRCGYC 1 cut(s) 273
BstC8I GCNNGC 5 cut(s) 302, 317, 333, 417, 493
BstDSI CCRYGG 2 cut(s) 265, 493
BstF5I GGATG 2 cut(s) 151, 178
BstFNI CGCG 3 cut(s) 284, 482, 495
BstHHI GCGC 2 cut(s) 163, 306
BstKTI GATC 4 cut(s) 37, 288, 358, 391
BstMAI GTCTC 3 cut(s) 21, 264, 314
BstMBI GATC 4 cut(s) 34, 285, 355, 388
BstMCI CGRYCG 2 cut(s) 170, 381
BstMWI GCNNNNNNNGC 7 cut(s) 16, 239, 245, 303, 312, 341, 488
BstNSI RCATGY 2 cut(s) 304, 419
BstSCI CCNGG 1 cut(s) 248
BstSLI GKGCMC 1 cut(s) 373
BstUI CGCG 3 cut(s) 284, 482, 495
BstV2I GAAGAC 1 cut(s) 49
BstX2I RGATCY 1 cut(s) 355
BstYI RGATCY 1 cut(s) 355
Bsu15I ATCGAT 1 cut(s) 107
BsuRI GGCC 2 cut(s) 242, 491
BsuTUI ATCGAT 1 cut(s) 107
BtgI CCRYGG 2 cut(s) 265, 493
BtgZI GCGATG 2 cut(s) 171, 513
BtrI CACGTC 1 cut(s) 507
BtsCI GGATG 2 cut(s) 151, 178
BtsIMutI CAGTG 1 cut(s) 419
Cac8I GCNNGC 5 cut(s) 302, 317, 333, 417, 493
CfoI GCGC 2 cut(s) 163, 306
Cfr10I RCCGGY 1 cut(s) 191
Cfr13I GGNCC 4 cut(s) 194, 218, 428, 490
Cfr42I CCGCGG 1 cut(s) 496
ClaI ATCGAT 1 cut(s) 107
CpoI CGGWCCG 1 cut(s) 194
CseI GACGC 1 cut(s) 290
CspI CGGWCCG 1 cut(s) 194
CviAII CATG 3 cut(s) 289, 301, 416
CviJI RGCY 8 cut(s) 98, 191, 242, 248, 253, 344, 466, 491
CviKI_1 RGCY 8 cut(s) 98, 191, 242, 248, 253, 344, 466, 491
DpnI GATC 4 cut(s) 36, 287, 357, 390
DpnII GATC 4 cut(s) 34, 285, 355, 388
EaeI YGGCCR 1 cut(s) 240
EciI GGCGGA 1 cut(s) 186
Eco32I GATATC 1 cut(s) 91
Eco47I GGWCC 3 cut(s) 194, 218, 428
Eco88I CYCGRG 1 cut(s) 208
EcoRV GATATC 1 cut(s) 91
Esp3I CGTCTC 3 cut(s) 21, 264, 314
FaeI CATG 3 cut(s) 292, 304, 419
FaiI YATR 7 cut(s) 65, 262, 290, 302, 417, 448, 533
FaqI GGGAC 1 cut(s) 441
FatI CATG 3 cut(s) 288, 300, 415
FauI CCCGC 6 cut(s) 24, 34, 345, 358, 449, 500
FblI GTMKAC 2 cut(s) 279, 522
Fnu4HI GCNGC 6 cut(s) 154, 234, 237, 240, 298, 496
FokI GGATG 2 cut(s) 158, 185
Fsp4HI GCNGC 6 cut(s) 154, 234, 237, 240, 298, 496
GlaI GCGC 2 cut(s) 162, 305
GluI GCNGC 6 cut(s) 154, 234, 237, 240, 298, 496
HaeIII GGCC 2 cut(s) 242, 491
HapII CCGG 3 cut(s) 24, 192, 249
HgaI GACGC 1 cut(s) 290
HhaI GCGC 2 cut(s) 163, 306
Hin1I GRCGYC 1 cut(s) 273
Hin1II CATG 3 cut(s) 292, 304, 419
Hin6I GCGC 2 cut(s) 161, 304
HinP1I GCGC 2 cut(s) 161, 304
HincII GTYRAC 2 cut(s) 280, 523
HindII GTYRAC 2 cut(s) 280, 523
HinfI GANTC 2 cut(s) 75, 206
HpaII CCGG 3 cut(s) 24, 192, 249
HphI GGTGA 2 cut(s) 44, 452
Hpy166II GTNNAC 5 cut(s) 218, 280, 371, 443, 523
Hpy188I TCNGA 1 cut(s) 172
Hpy188III TCNNGA 4 cut(s) 24, 338, 395, 426
Hpy8I GTNNAC 5 cut(s) 218, 280, 371, 443, 523
Hpy99I CGWCG 6 cut(s) 56, 278, 281, 284, 508, 524
HpyAV CCTTC 1 cut(s) 392
HpyCH4III ACNGT 4 cut(s) 32, 183, 222, 423
HpyCH4IV ACGT 3 cut(s) 117, 273, 506
HpyCH4V TGCA 4 cut(s) 371, 419, 450, 510
HpyF10VI GCNNNNNNNGC 7 cut(s) 16, 239, 245, 303, 312, 341, 488
HpySE526I ACGT 3 cut(s) 117, 273, 506
Hsp92I GRCGYC 1 cut(s) 273
Hsp92II CATG 3 cut(s) 292, 304, 419
HspAI GCGC 2 cut(s) 161, 304
Kpn2I TCCGGA 1 cut(s) 23
KspI CCGCGG 1 cut(s) 496
Kzo9I GATC 4 cut(s) 34, 285, 355, 388
LpnPI CCDG 4 cut(s) 37, 205, 262, 323
LweI GCATC 4 cut(s) 113, 148, 334, 490
MaeII ACGT 3 cut(s) 117, 273, 506
MaeIII GTNAC 2 cut(s) 183, 222
MalI GATC 4 cut(s) 36, 287, 357, 390
MbiI CCGCTC 1 cut(s) 456
MboI GATC 4 cut(s) 34, 285, 355, 388
MboII GAAGA 3 cut(s) 49, 124, 383
MflI RGATCY 1 cut(s) 355
MhlI GDGCHC 2 cut(s) 337, 373
MlyI GAGTC 2 cut(s) 69, 200
MmeI TCCRAC 1 cut(s) 150
MnlI CCTC 3 cut(s) 174, 464, 481
MroI TCCGGA 1 cut(s) 23
MslI CAYNNNNRTG 1 cut(s) 330
MspA1I CMGCKG 1 cut(s) 495
MspI CCGG 3 cut(s) 24, 192, 249
MspR9I CCNGG 1 cut(s) 250
MvnI CGCG 3 cut(s) 284, 482, 495
MwoI GCNNNNNNNGC 7 cut(s) 16, 239, 245, 303, 312, 341, 488
NciI CCSGG 1 cut(s) 250
NdeII GATC 4 cut(s) 34, 285, 355, 388
NlaIII CATG 3 cut(s) 292, 304, 419
NlaIV GGNNCC 2 cut(s) 357, 429
NmeAIII GCCGAG 4 cut(s) 59, 74, 291, 492
NmuCI GTSAC 1 cut(s) 183
NspI RCATGY 2 cut(s) 304, 419
PaeI GCATGC 2 cut(s) 304, 419
PcsI WCGNNNNNNNCGW 3 cut(s) 328, 458, 512
PflFI GACNNNGTC 1 cut(s) 275
PkrI GCNGC 6 cut(s) 155, 235, 238, 241, 299, 497
PleI GAGTC 2 cut(s) 69, 200
PpsI GAGTC 2 cut(s) 69, 200
PspN4I GGNNCC 2 cut(s) 357, 429
PspPI GGNCC 4 cut(s) 194, 218, 428, 490
PsuI RGATCY 1 cut(s) 355
PsyI GACNNNGTC 1 cut(s) 275
RseI CAYNNNNRTG 1 cut(s) 330
Rsr2I CGGWCCG 1 cut(s) 194
RsrII CGGWCCG 1 cut(s) 194
SacII CCGCGG 1 cut(s) 496
SalI GTCGAC 2 cut(s) 278, 521
SatI GCNGC 6 cut(s) 154, 234, 237, 240, 298, 496
Sau3AI GATC 4 cut(s) 34, 285, 355, 388
Sau96I GGNCC 4 cut(s) 194, 218, 428, 490
SchI GAGTC 2 cut(s) 69, 200
ScrFI CCNGG 1 cut(s) 250
SduI GDGCHC 2 cut(s) 337, 373
SetI ASST 5 cut(s) 120, 276, 346, 387, 509
SfaNI GCATC 4 cut(s) 113, 148, 334, 490
Sfr303I CCGCGG 1 cut(s) 496
SgrBI CCGCGG 1 cut(s) 496
SgrDI CGTCGACG 1 cut(s) 278
SinI GGWCC 3 cut(s) 194, 218, 428
SmiMI CAYNNNNRTG 1 cut(s) 330
SphI GCATGC 2 cut(s) 304, 419
StyD4I CCNGG 1 cut(s) 248
TaaI ACNGT 4 cut(s) 32, 183, 222, 423
TaiI ACGT 3 cut(s) 120, 276, 509
TaqI TCGA 6 cut(s) 107, 204, 279, 394, 405, 522
TaqII GACCGA 3 cut(s) 156, 395, 445
TauI GCSGC 6 cut(s) 156, 236, 239, 242, 300, 498
TscAI CASTG 1 cut(s) 426
TseFI GTSAC 1 cut(s) 183
Tsp45I GTSAC 1 cut(s) 183
TspDTI ATGAA 2 cut(s) 17, 125
TspGWI ACGGA 2 cut(s) 101, 241
TspRI CASTG 1 cut(s) 426
Tth111I GACNNNGTC 1 cut(s) 275
VneI GTGCAC 1 cut(s) 369
VpaK11BI GGWCC 3 cut(s) 194, 218, 428
XceI RCATGY 2 cut(s) 304, 419
XmiI GTMKAC 2 cut(s) 279, 522
ZraI GACGTC 1 cut(s) 274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.