Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000032

Orthogroup ID

OG0000104

Physical Location & Seq

Genomic Coordinates Reverse (-)

95198 .. 97067

Gene Structure 1870 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_32G00442840.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 582 bp

ATGGGGGCCGGCGATGCGCCTCGGTCGGATGTGGAACGGTCACAAGCCGGTCCGCCACTCGACTCGGGGCGTGGACCGTTACGGATTGCGGCGGCGGCCAAAGCCCGGCTGTTGATATGCCCGTGGAGACGTCGTCGACGCGATCATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCTGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGACGGACTGGGAACGCTCCTTCGGGGCTTTCCCCGGCGTTCAACAGTCGACTCAGAACTGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0001775 GO:0002252 GO:0002263 GO:0002274 GO:0002275 GO:0002283 GO:0002366 GO:0002376 GO:0002443 GO:0002444 GO:0002446 GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005766 GO:0005773 GO:0005775 GO:0005975 GO:0005996 GO:0006013 GO:0006464 GO:0006517 GO:0006807 GO:0006810 GO:0006887 GO:0006955 GO:0008150 GO:0008152 GO:0009056 GO:0009100 GO:0009311 GO:0009313 GO:0009987 GO:0012505 GO:0015923 GO:0016052 GO:0016192 GO:0016787 GO:0016798 GO:0019318 GO:0019538 GO:0030141 GO:0031410 GO:0031974 GO:0031982 GO:0031983 GO:0032940 GO:0034774 GO:0035578 GO:0036211 GO:0036230 GO:0042119 GO:0042582 GO:0043170 GO:0043202 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043299 GO:0043312 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044421 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045055 GO:0045321 GO:0046903 GO:0050896 GO:0051179 GO:0051234 GO:0060205 GO:0070013 GO:0071704 GO:0097708 GO:0099503 GO:1901135 GO:1901564 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

193

Amino Acids

20.43

Weight (kDa)

11.13

Isoelectric Point (pI)

63.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000104)

Species	Orthologous Gene IDs
pyrus_communis	pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii	Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Species

Orthologous Gene IDs

pyrus_communis

pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350

rosa_roxburghii

Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	133
AccB7I	CCANNNNNTGG	1 cut(s)	243
AccBSI	CCGCTC	1 cut(s)	403
AccI	GTMKAC	2 cut(s)	136, 473
AccII	CGCG	5 cut(s)	141, 264, 394, 413, 523
AclWI	GGATC	2 cut(s)	291, 304
AcoI	YGGCCR	2 cut(s)	96, 419
AcsI	RAATTY	1 cut(s)	509
AcyI	GRCGYC	1 cut(s)	130
AfiI	CCNNNNNNNGG	6 cut(s)	105, 214, 230, 243, 417, 523
AflII	CTTAAG	1 cut(s)	554
AgsI	TTSAA	2 cut(s)	467, 514
AjiI	CACGTC	1 cut(s)	260
AjnI	CCWGG	1 cut(s)	207
AluBI	AGCT	1 cut(s)	385
AluI	AGCT	1 cut(s)	385
Alw21I	GWGCWC	3 cut(s)	194, 254, 490
Alw26I	GTCTC	2 cut(s)	121, 171
AlwI	GGATC	2 cut(s)	291, 304
AlwNI	CAGNNNCTG	1 cut(s)	243
Ama87I	CYCGRG	4 cut(s)	64, 307, 324, 380
AoxI	GGCC	3 cut(s)	6, 96, 419
ApeKI	GCWGC	2 cut(s)	154, 385
ApoI	RAATTY	1 cut(s)	509
ArsI	GACNNNNNNTTYG	1 cut(s)	558
Asp700I	GAANNNNTTC	1 cut(s)	509
AspLEI	GCGC	3 cut(s)	19, 163, 523
AspS9I	GGNCC	5 cut(s)	6, 50, 74, 234, 343
AsuC2I	CCSGG	3 cut(s)	106, 423, 459
AsuHPI	GGTGA	1 cut(s)	383
AvaI	CYCGRG	4 cut(s)	64, 307, 324, 380
AvaII	GGWCC	4 cut(s)	50, 74, 234, 343
BaeGI	GKGCMC	1 cut(s)	338
BamHI	GGATCC	1 cut(s)	296
Bbv12I	GWGCWC	3 cut(s)	194, 254, 490
BbvI	GCAGC	2 cut(s)	166, 372
BceAI	ACGGC	3 cut(s)	148, 231, 547
BciT130I	CCWGG	1 cut(s)	209
BcnI	CCSGG	3 cut(s)	106, 423, 459
BcoDI	GTCTC	2 cut(s)	121, 171
BfrI	CTTAAG	1 cut(s)	554
BglI	GCCNNNNNGGC	1 cut(s)	169
BisI	GCNGC	8 cut(s)	90, 93, 96, 155, 241, 386, 395, 411
BlpI	GCTNAGC	1 cut(s)	219
BlsI	GCNGC	8 cut(s)	91, 94, 97, 156, 242, 387, 396, 412
Bme1390I	CCNGG	4 cut(s)	106, 209, 423, 459
Bme18I	GGWCC	4 cut(s)	50, 74, 234, 343
BmeT110I	CYCGRG	4 cut(s)	64, 307, 324, 380
BmgBI	CACGTC	1 cut(s)	260
BmgT120I	GGNCC	5 cut(s)	6, 50, 74, 234, 343
BmiI	GGNNCC	5 cut(s)	7, 235, 298, 344, 345
BmrFI	CCNGG	4 cut(s)	106, 209, 423, 459
BmrI	ACTGGG	2 cut(s)	341, 442
BmsI	GCATC	2 cut(s)	4, 191
BmuI	ACTGGG	2 cut(s)	341, 442
Bpu1102I	GCTNAGC	1 cut(s)	219
BpuMI	CCSGG	3 cut(s)	106, 423, 459
BsaHI	GRCGYC	1 cut(s)	130
BsaJI	CCNNGG	7 cut(s)	20, 122, 207, 306, 392, 422, 457
BsaXI	ACNNNNNCTCC	4 cut(s)	118, 148, 218, 248
Bsc4I	CCNNNNNNNGG	6 cut(s)	105, 214, 230, 243, 417, 523
Bse118I	RCCGGY	3 cut(s)	8, 47, 417
Bse1I	ACTGG	2 cut(s)	347, 437
BseBI	CCWGG	1 cut(s)	209
BseDI	CCNNGG	7 cut(s)	20, 122, 207, 306, 392, 422, 457
BseGI	GGATG	1 cut(s)	34
BseLI	CCNNNNNNNGG	6 cut(s)	105, 214, 230, 243, 417, 523
BseMII	CTCAG	2 cut(s)	233, 491
BseNI	ACTGG	2 cut(s)	347, 437
BseSI	GKGCMC	1 cut(s)	338
BseX3I	CGGCCG	1 cut(s)	419
BseXI	GCAGC	2 cut(s)	166, 372
BseYI	CCCAGC	1 cut(s)	331
Bsh1236I	CGCG	5 cut(s)	141, 264, 394, 413, 523
Bsh1285I	CGRYCG	2 cut(s)	26, 422
BshFI	GGCC	3 cut(s)	8, 98, 421
BsiEI	CGRYCG	2 cut(s)	26, 422
BsiHKAI	GWGCWC	3 cut(s)	194, 254, 490
BsiHKCI	CYCGRG	4 cut(s)	64, 307, 324, 380
BsiSI	CCGG	8 cut(s)	9, 48, 106, 224, 273, 418, 422, 459
BslFI	GGGAC	3 cut(s)	329, 335, 439
BslI	CCNNNNNNNGG	6 cut(s)	105, 214, 230, 243, 417, 523
BsmAI	GTCTC	2 cut(s)	121, 171
BsmBI	CGTCTC	2 cut(s)	121, 171
BsmFI	GGGAC	3 cut(s)	329, 335, 439
BsnI	GGCC	3 cut(s)	8, 98, 421
BsoBI	CYCGRG	4 cut(s)	64, 307, 324, 380
Bsp1286I	GDGCHC	4 cut(s)	194, 254, 338, 490
Bsp143I	GATC	2 cut(s)	142, 296
Bsp1720I	GCTNAGC	1 cut(s)	219
BspANI	GGCC	3 cut(s)	8, 98, 421
BspCNI	CTCAG	2 cut(s)	232, 490
BspFNI	CGCG	5 cut(s)	141, 264, 394, 413, 523
BspLI	GGNNCC	5 cut(s)	7, 235, 298, 344, 345
BspPI	GGATC	2 cut(s)	291, 304
BspQI	GCTCTTC	1 cut(s)	242
BspTI	CTTAAG	1 cut(s)	554
BsrBI	CCGCTC	1 cut(s)	403
BsrFI	RCCGGY	3 cut(s)	8, 47, 417
BsrI	ACTGG	2 cut(s)	347, 437
BssAI	RCCGGY	3 cut(s)	8, 47, 417
BssECI	CCNNGG	7 cut(s)	20, 122, 207, 306, 392, 422, 457
BssMI	GATC	2 cut(s)	142, 296
BssNI	GRCGYC	1 cut(s)	130
Bst2UI	CCWGG	1 cut(s)	209
Bst4CI	ACNGT	4 cut(s)	39, 78, 471, 485
Bst6I	CTCTTC	1 cut(s)	242
BstACI	GRCGYC	1 cut(s)	130
BstAFI	CTTAAG	1 cut(s)	554
BstC8I	GCNNGC	7 cut(s)	10, 159, 174, 190, 200, 415, 419
BstDEI	CTNAG	2 cut(s)	219, 477
BstDSI	CCRYGG	2 cut(s)	122, 392
BstF5I	GGATG	1 cut(s)	34
BstFNI	CGCG	5 cut(s)	141, 264, 394, 413, 523
BstHHI	GCGC	3 cut(s)	19, 163, 523
BstKTI	GATC	2 cut(s)	145, 299
BstMAI	GTCTC	2 cut(s)	121, 171
BstMBI	GATC	2 cut(s)	142, 296
BstMCI	CGRYCG	2 cut(s)	26, 422
BstNI	CCWGG	1 cut(s)	209
BstNSI	RCATGY	1 cut(s)	161
BstSCI	CCNGG	4 cut(s)	104, 207, 421, 457
BstSLI	GKGCMC	1 cut(s)	338
BstUI	CGCG	5 cut(s)	141, 264, 394, 413, 523
BstV1I	GCAGC	2 cut(s)	166, 372
BstX2I	RGATCY	1 cut(s)	296
BstYI	RGATCY	1 cut(s)	296
BstZI	CGGCCG	1 cut(s)	419
BsuRI	GGCC	3 cut(s)	8, 98, 421
BtgI	CCRYGG	2 cut(s)	122, 392
BtgZI	GCGATG	1 cut(s)	27
BtrI	CACGTC	1 cut(s)	260
BtsCI	GGATG	1 cut(s)	34
Cac8I	GCNNGC	7 cut(s)	10, 159, 174, 190, 200, 415, 419
CaiI	CAGNNNCTG	1 cut(s)	243
CfoI	GCGC	3 cut(s)	19, 163, 523
Cfr10I	RCCGGY	3 cut(s)	8, 47, 417
Cfr13I	GGNCC	5 cut(s)	6, 50, 74, 234, 343
Cfr42I	CCGCGG	1 cut(s)	395
CpoI	CGGWCCG	1 cut(s)	50
CseI	GACGC	1 cut(s)	147
CspI	CGGWCCG	1 cut(s)	50
CviAII	CATG	2 cut(s)	146, 158
DdeI	CTNAG	2 cut(s)	219, 477
DpnI	GATC	2 cut(s)	144, 298
DpnII	GATC	2 cut(s)	142, 296
EaeI	YGGCCR	2 cut(s)	96, 419
EagI	CGGCCG	1 cut(s)	419
Eam1104I	CTCTTC	1 cut(s)	242
EarI	CTCTTC	1 cut(s)	242
EciI	GGCGGA	1 cut(s)	42
EclXI	CGGCCG	1 cut(s)	419
Eco47I	GGWCC	4 cut(s)	50, 74, 234, 343
Eco52I	CGGCCG	1 cut(s)	419
Eco88I	CYCGRG	4 cut(s)	64, 307, 324, 380
EcoO109I	RGGNCCY	1 cut(s)	343
EcoRII	CCWGG	1 cut(s)	207
Esp3I	CGTCTC	2 cut(s)	121, 171
FaeI	CATG	2 cut(s)	149, 161
FaiI	YATR	4 cut(s)	118, 147, 159, 546
FaqI	GGGAC	3 cut(s)	329, 335, 439
FatI	CATG	2 cut(s)	145, 157
FauI	CCCGC	3 cut(s)	396, 516, 527
FblI	GTMKAC	2 cut(s)	136, 473
Fnu4HI	GCNGC	8 cut(s)	90, 93, 96, 155, 241, 386, 395, 411
FokI	GGATG	1 cut(s)	41
Fsp4HI	GCNGC	8 cut(s)	90, 93, 96, 155, 241, 386, 395, 411
GlaI	GCGC	3 cut(s)	18, 162, 522
GluI	GCNGC	8 cut(s)	90, 93, 96, 155, 241, 386, 395, 411
GsaI	CCCAGC	1 cut(s)	335
HaeIII	GGCC	3 cut(s)	8, 98, 421
HapII	CCGG	8 cut(s)	9, 48, 106, 224, 273, 418, 422, 459
HgaI	GACGC	1 cut(s)	147
HhaI	GCGC	3 cut(s)	19, 163, 523
Hin1I	GRCGYC	1 cut(s)	130
Hin1II	CATG	2 cut(s)	149, 161
Hin6I	GCGC	3 cut(s)	17, 161, 521
HinP1I	GCGC	3 cut(s)	17, 161, 521
HincII	GTYRAC	2 cut(s)	137, 474
HindII	GTYRAC	2 cut(s)	137, 474
HinfI	GANTC	3 cut(s)	62, 475, 548
HpaII	CCGG	8 cut(s)	9, 48, 106, 224, 273, 418, 422, 459
HphI	GGTGA	1 cut(s)	383
Hpy166II	GTNNAC	5 cut(s)	74, 137, 374, 474, 529
Hpy188I	TCNGA	3 cut(s)	28, 480, 492
Hpy188III	TCNNGA	2 cut(s)	309, 352
Hpy8I	GTNNAC	5 cut(s)	74, 137, 374, 474, 529
Hpy99I	CGWCG	5 cut(s)	135, 138, 141, 264, 364
HpyAV	CCTTC	1 cut(s)	454
HpyCH4III	ACNGT	4 cut(s)	39, 78, 471, 485
HpyCH4IV	ACGT	2 cut(s)	130, 259
HpyF3I	CTNAG	2 cut(s)	219, 477
HpySE526I	ACGT	2 cut(s)	130, 259
Hsp92I	GRCGYC	1 cut(s)	130
Hsp92II	CATG	2 cut(s)	149, 161
HspAI	GCGC	3 cut(s)	17, 161, 521
KflI	GGGWCCC	1 cut(s)	343
KroI	GCCGGC	2 cut(s)	8, 417
KroNI	GCCGGC	2 cut(s)	10, 419
KspI	CCGCGG	1 cut(s)	395
Kzo9I	GATC	2 cut(s)	142, 296
LguI	GCTCTTC	1 cut(s)	242
LmnI	GCTCC	2 cut(s)	197, 446
Lsp1109I	GCAGC	2 cut(s)	166, 372
LweI	GCATC	2 cut(s)	4, 191
MaeII	ACGT	2 cut(s)	130, 259
MaeIII	GTNAC	4 cut(s)	39, 78, 301, 539
MalI	GATC	2 cut(s)	144, 298
MbiI	CCGCTC	1 cut(s)	403
MboI	GATC	2 cut(s)	142, 296
MboII	GAAGA	2 cut(s)	259, 517
MflI	RGATCY	1 cut(s)	296
MhlI	GDGCHC	4 cut(s)	194, 254, 338, 490
MluCI	AATT	1 cut(s)	509
MlyI	GAGTC	3 cut(s)	56, 469, 542
MmeI	TCCRAC	1 cut(s)	6
MnlI	CCTC	5 cut(s)	30, 220, 316, 320, 581
MroNI	GCCGGC	2 cut(s)	8, 417
MroXI	GAANNNNTTC	1 cut(s)	509
MseI	TTAA	1 cut(s)	555
MslI	CAYNNNNRTG	1 cut(s)	187
MspA1I	CMGCKG	2 cut(s)	240, 394
MspCI	CTTAAG	1 cut(s)	554
MspI	CCGG	8 cut(s)	9, 48, 106, 224, 273, 418, 422, 459
MspR9I	CCNGG	4 cut(s)	106, 209, 423, 459
MvaI	CCWGG	1 cut(s)	209
MvnI	CGCG	5 cut(s)	141, 264, 394, 413, 523
NaeI	GCCGGC	2 cut(s)	10, 419
NciI	CCSGG	3 cut(s)	106, 423, 459
NdeII	GATC	2 cut(s)	142, 296
NgoMIV	GCCGGC	2 cut(s)	8, 417
NlaIII	CATG	2 cut(s)	149, 161
NlaIV	GGNNCC	5 cut(s)	7, 235, 298, 344, 345
NmeAIII	GCCGAG	1 cut(s)	148
NmuCI	GTSAC	1 cut(s)	39
NspI	RCATGY	1 cut(s)	161
PaeI	GCATGC	1 cut(s)	161
PaeR7I	CTCGAG	2 cut(s)	324, 380
PciSI	GCTCTTC	1 cut(s)	242
PcsI	WCGNNNNNNNCGW	1 cut(s)	185
PdiI	GCCGGC	2 cut(s)	10, 419
PdmI	GAANNNNTTC	1 cut(s)	509
PflFI	GACNNNGTC	1 cut(s)	132
PflMI	CCANNNNNTGG	1 cut(s)	243
PkrI	GCNGC	8 cut(s)	91, 94, 97, 156, 242, 387, 396, 412
PleI	GAGTC	3 cut(s)	56, 469, 542
PpsI	GAGTC	3 cut(s)	56, 469, 542
PpuMI	RGGWCCY	1 cut(s)	343
Psp5II	RGGWCCY	1 cut(s)	343
Psp6I	CCWGG	1 cut(s)	207
PspFI	CCCAGC	1 cut(s)	331
PspGI	CCWGG	1 cut(s)	207
PspN4I	GGNNCC	5 cut(s)	7, 235, 298, 344, 345
PspPI	GGNCC	5 cut(s)	6, 50, 74, 234, 343
PspPPI	RGGWCCY	1 cut(s)	343
PspXI	VCTCGAGB	2 cut(s)	324, 380
PstNI	CAGNNNCTG	1 cut(s)	243
PsuI	RGATCY	1 cut(s)	296
PsyI	GACNNNGTC	1 cut(s)	132
RseI	CAYNNNNRTG	1 cut(s)	187
Rsr2I	CGGWCCG	1 cut(s)	50
RsrII	CGGWCCG	1 cut(s)	50
SacII	CCGCGG	1 cut(s)	395
SalI	GTCGAC	2 cut(s)	135, 472
SapI	GCTCTTC	1 cut(s)	242
SaqAI	TTAA	1 cut(s)	555
SatI	GCNGC	8 cut(s)	90, 93, 96, 155, 241, 386, 395, 411
Sau3AI	GATC	2 cut(s)	142, 296
Sau96I	GGNCC	5 cut(s)	6, 50, 74, 234, 343
SchI	GAGTC	3 cut(s)	56, 469, 542
ScrFI	CCNGG	4 cut(s)	106, 209, 423, 459
SduI	GDGCHC	4 cut(s)	194, 254, 338, 490
SetI	ASST	6 cut(s)	133, 231, 262, 308, 387, 561
SfaNI	GCATC	2 cut(s)	4, 191
Sfr274I	CTCGAG	2 cut(s)	324, 380
Sfr303I	CCGCGG	1 cut(s)	395
SgrBI	CCGCGG	1 cut(s)	395
SgrDI	CGTCGACG	1 cut(s)	135
SinI	GGWCC	4 cut(s)	50, 74, 234, 343
SlaI	CTCGAG	2 cut(s)	324, 380
SmiMI	CAYNNNNRTG	1 cut(s)	187
SmlI	CTYRAG	3 cut(s)	324, 380, 554
SmoI	CTYRAG	3 cut(s)	324, 380, 554
SphI	GCATGC	1 cut(s)	161
Sse9I	AATT	1 cut(s)	509
StyD4I	CCNGG	4 cut(s)	104, 207, 421, 457
TaaI	ACNGT	4 cut(s)	39, 78, 471, 485
TaiI	ACGT	2 cut(s)	133, 262
TaqI	TCGA	5 cut(s)	60, 136, 325, 381, 473
TaqII	GACCGA	1 cut(s)	12
TasI	AATT	1 cut(s)	509
TauI	GCSGC	6 cut(s)	92, 95, 98, 243, 397, 413
Tru1I	TTAA	1 cut(s)	555
Tru9I	TTAA	1 cut(s)	555
TseFI	GTSAC	1 cut(s)	39
TseI	GCWGC	2 cut(s)	154, 385
Tsp45I	GTSAC	1 cut(s)	39
TspGWI	ACGGA	3 cut(s)	97, 289, 443
Tth111I	GACNNNGTC	1 cut(s)	132
Van91I	CCANNNNNTGG	1 cut(s)	243
Vha464I	CTTAAG	1 cut(s)	554
VpaK11BI	GGWCC	4 cut(s)	50, 74, 234, 343
XapI	RAATTY	1 cut(s)	509
XceI	RCATGY	1 cut(s)	161
XhoI	CTCGAG	2 cut(s)	324, 380
XmiI	GTMKAC	2 cut(s)	136, 473
XmnI	GAANNNNTTC	1 cut(s)	509
ZraI	GACGTC	1 cut(s)	131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.