Rroxscaffold_132G00452130

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000132
OG0000104
Physical Location & Seq
Reverse (-)
3721 .. 4482
762 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_132G00452130.1

Sequence Viewer

Length: 690 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCCGGGGCGTGAGCCCGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGCGCGTCTCGCGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGTGGTTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACAGCCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

229

Amino Acids

24.64

Weight (kDa)

10.87

Isoelectric Point (pI)

50.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 249
AccB7I CCANNNNNTGG 1 cut(s) 331
AccBSI CCGCTC 2 cut(s) 56, 574
AccII CGCG 7 cut(s) 16, 159, 166, 168, 352, 565, 584
AccIII TCCGGA 2 cut(s) 239, 388
AclI AACGTT 1 cut(s) 228
AclWI GGATC 2 cut(s) 462, 475
AcoI YGGCCR 2 cut(s) 57, 590
AcsI RAATTY 1 cut(s) 194
AcyI GRCGYC 1 cut(s) 246
AfaI GTAC 2 cut(s) 420, 660
AfiI CCNNNNNNNGG 8 cut(s) 121, 205, 211, 306, 318, 331, 448, 588
AgsI TTSAA 4 cut(s) 96, 110, 383, 639
AjiI CACGTC 2 cut(s) 211, 348
AjnI CCWGG 1 cut(s) 299
AluBI AGCT 1 cut(s) 556
AluI AGCT 1 cut(s) 556
Alw21I GWGCWC 1 cut(s) 342
Alw26I GTCTC 3 cut(s) 166, 237, 443
AlwI GGATC 2 cut(s) 462, 475
AlwNI CAGNNNCTG 1 cut(s) 331
Ama87I CYCGRG 6 cut(s) 34, 260, 478, 495, 551, 629
Aor13HI TCCGGA 2 cut(s) 239, 388
AoxI GGCC 6 cut(s) 57, 112, 256, 309, 375, 590
ApeKI GCWGC 2 cut(s) 25, 556
ApoI RAATTY 1 cut(s) 194
AspLEI GCGC 4 cut(s) 16, 159, 168, 368
AspS9I GGNCC 6 cut(s) 256, 309, 322, 376, 394, 514
AsuC2I CCSGG 8 cut(s) 35, 36, 48, 206, 371, 594, 630, 631
AsuHPI GGTGA 1 cut(s) 554
AsuII TTCGAA 1 cut(s) 175
AvaI CYCGRG 6 cut(s) 34, 260, 478, 495, 551, 629
AvaII GGWCC 3 cut(s) 322, 394, 514
BaeGI GKGCMC 1 cut(s) 509
BamHI GGATCC 1 cut(s) 467
BanII GRGCYC 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 342
BbvI GCAGC 2 cut(s) 12, 543
BceAI ACGGC 3 cut(s) 44, 157, 238
BciT130I CCWGG 1 cut(s) 301
BcnI CCSGG 8 cut(s) 35, 36, 48, 206, 371, 594, 630, 631
BcoDI GTCTC 3 cut(s) 166, 237, 443
BglI GCCNNNNNGGC 1 cut(s) 374
BglII AGATCT 1 cut(s) 70
BisI GCNGC 8 cut(s) 17, 26, 57, 329, 375, 557, 566, 582
BlsI GCNGC 8 cut(s) 18, 27, 58, 330, 376, 558, 567, 583
Bme1390I CCNGG 9 cut(s) 35, 36, 48, 206, 301, 371, 594, 630, 631
Bme18I GGWCC 3 cut(s) 322, 394, 514
BmeT110I CYCGRG 6 cut(s) 34, 260, 478, 495, 551, 629
BmgBI CACGTC 2 cut(s) 211, 348
BmgT120I GGNCC 6 cut(s) 256, 309, 322, 376, 394, 514
BmiI GGNNCC 6 cut(s) 131, 257, 323, 469, 515, 516
BmrFI CCNGG 9 cut(s) 35, 36, 48, 206, 301, 371, 594, 630, 631
BmrI ACTGGG 2 cut(s) 512, 613
BmsI GCATC 1 cut(s) 440
BmuI ACTGGG 2 cut(s) 512, 613
Bpu14I TTCGAA 1 cut(s) 175
BpuMI CCSGG 8 cut(s) 35, 36, 48, 206, 371, 594, 630, 631
BsaHI GRCGYC 1 cut(s) 246
BsaI GGTCTC 1 cut(s) 443
BsaWI WCCGGW 3 cut(s) 239, 360, 388
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 306, 336
Bsc4I CCNNNNNNNGG 8 cut(s) 121, 205, 211, 306, 318, 331, 448, 588
Bse118I RCCGGY 2 cut(s) 412, 588
Bse1I ACTGG 3 cut(s) 518, 608, 660
BseAI TCCGGA 2 cut(s) 239, 388
BseBI CCWGG 1 cut(s) 301
BseLI CCNNNNNNNGG 8 cut(s) 121, 205, 211, 306, 318, 331, 448, 588
BseMII CTCAG 1 cut(s) 663
BseNI ACTGG 3 cut(s) 518, 608, 660
BseSI GKGCMC 1 cut(s) 509
BseX3I CGGCCG 2 cut(s) 57, 590
BseXI GCAGC 2 cut(s) 12, 543
BseYI CCCAGC 1 cut(s) 502
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 7 cut(s) 16, 159, 166, 168, 352, 565, 584
Bsh1285I CGRYCG 4 cut(s) 23, 60, 417, 593
BshFI GGCC 6 cut(s) 59, 114, 258, 311, 377, 592
BsiEI CGRYCG 4 cut(s) 23, 60, 417, 593
BsiHKAI GWGCWC 1 cut(s) 342
BsiHKCI CYCGRG 6 cut(s) 34, 260, 478, 495, 551, 629
BslFI GGGAC 4 cut(s) 221, 500, 506, 610
BslI CCNNNNNNNGG 8 cut(s) 121, 205, 211, 306, 318, 331, 448, 588
BsmAI GTCTC 3 cut(s) 166, 237, 443
BsmBI CGTCTC 2 cut(s) 166, 237
BsmFI GGGAC 4 cut(s) 221, 500, 506, 610
BsnI GGCC 6 cut(s) 59, 114, 258, 311, 377, 592
Bso31I GGTCTC 1 cut(s) 443
BsoBI CYCGRG 6 cut(s) 34, 260, 478, 495, 551, 629
Bsp119I TTCGAA 1 cut(s) 175
Bsp1286I GDGCHC 3 cut(s) 48, 342, 509
Bsp13I TCCGGA 2 cut(s) 239, 388
Bsp143I GATC 2 cut(s) 70, 467
BspANI GGCC 6 cut(s) 59, 114, 258, 311, 377, 592
BspCNI CTCAG 1 cut(s) 662
BspEI TCCGGA 2 cut(s) 239, 388
BspFNI CGCG 7 cut(s) 16, 159, 166, 168, 352, 565, 584
BspLI GGNNCC 6 cut(s) 131, 257, 323, 469, 515, 516
BspPI GGATC 2 cut(s) 462, 475
BspQI GCTCTTC 1 cut(s) 330
BspT104I TTCGAA 1 cut(s) 175
BspTNI GGTCTC 1 cut(s) 443
BsrBI CCGCTC 2 cut(s) 56, 574
BsrFI RCCGGY 2 cut(s) 412, 588
BsrI ACTGG 3 cut(s) 518, 608, 660
BssAI RCCGGY 2 cut(s) 412, 588
BssMI GATC 2 cut(s) 70, 467
BssNI GRCGYC 1 cut(s) 246
BssT1I CCWWGG 1 cut(s) 442
Bst2UI CCWGG 1 cut(s) 301
Bst4CI ACNGT 1 cut(s) 681
Bst6I CTCTTC 3 cut(s) 112, 260, 330
BstACI GRCGYC 1 cut(s) 246
BstBI TTCGAA 1 cut(s) 175
BstC8I GCNNGC 3 cut(s) 292, 586, 590
BstDEI CTNAG 1 cut(s) 649
BstDSI CCRYGG 1 cut(s) 563
BstFNI CGCG 7 cut(s) 16, 159, 166, 168, 352, 565, 584
BstHHI GCGC 4 cut(s) 16, 159, 168, 368
BstKTI GATC 2 cut(s) 73, 470
BstMAI GTCTC 3 cut(s) 166, 237, 443
BstMBI GATC 2 cut(s) 70, 467
BstMCI CGRYCG 4 cut(s) 23, 60, 417, 593
BstNI CCWGG 1 cut(s) 301
BstSCI CCNGG 9 cut(s) 33, 34, 46, 204, 299, 369, 592, 628, 629
BstSLI GKGCMC 1 cut(s) 509
BstUI CGCG 7 cut(s) 16, 159, 166, 168, 352, 565, 584
BstV1I GCAGC 2 cut(s) 12, 543
BstX2I RGATCY 2 cut(s) 70, 467
BstYI RGATCY 2 cut(s) 70, 467
BstZI CGGCCG 2 cut(s) 57, 590
BsuRI GGCC 6 cut(s) 59, 114, 258, 311, 377, 592
BtgI CCRYGG 1 cut(s) 563
BtrI CACGTC 2 cut(s) 211, 348
Cac8I GCNNGC 3 cut(s) 292, 586, 590
CaiI CAGNNNCTG 1 cut(s) 331
CfoI GCGC 4 cut(s) 16, 159, 168, 368
Cfr10I RCCGGY 2 cut(s) 412, 588
Cfr13I GGNCC 6 cut(s) 256, 309, 322, 376, 394, 514
Cfr42I CCGCGG 1 cut(s) 566
Cfr9I CCCGGG 2 cut(s) 34, 629
CseI GACGC 1 cut(s) 148
Csp6I GTAC 2 cut(s) 419, 659
CviAII CATG 2 cut(s) 134, 153
CviQI GTAC 2 cut(s) 419, 659
DdeI CTNAG 1 cut(s) 649
DpnI GATC 2 cut(s) 72, 469
DpnII GATC 2 cut(s) 70, 467
EaeI YGGCCR 2 cut(s) 57, 590
EagI CGGCCG 2 cut(s) 57, 590
Eam1104I CTCTTC 3 cut(s) 112, 260, 330
EarI CTCTTC 3 cut(s) 112, 260, 330
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 2 cut(s) 57, 590
Eco130I CCWWGG 1 cut(s) 442
Eco24I GRGCYC 1 cut(s) 48
Eco31I GGTCTC 1 cut(s) 443
Eco47I GGWCC 3 cut(s) 322, 394, 514
Eco52I CGGCCG 2 cut(s) 57, 590
Eco88I CYCGRG 6 cut(s) 34, 260, 478, 495, 551, 629
EcoO109I RGGNCCY 2 cut(s) 256, 514
EcoRII CCWGG 1 cut(s) 299
EcoT14I CCWWGG 1 cut(s) 442
EcoT38I GRGCYC 1 cut(s) 48
ErhI CCWWGG 1 cut(s) 442
Esp3I CGTCTC 2 cut(s) 166, 237
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 3 cut(s) 135, 154, 425
FaqI GGGAC 4 cut(s) 221, 500, 506, 610
FatI CATG 2 cut(s) 133, 152
FauI CCCGC 2 cut(s) 245, 567
Fnu4HI GCNGC 8 cut(s) 17, 26, 57, 329, 375, 557, 566, 582
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 8 cut(s) 17, 26, 57, 329, 375, 557, 566, 582
GlaI GCGC 4 cut(s) 15, 158, 167, 367
GluI GCNGC 8 cut(s) 17, 26, 57, 329, 375, 557, 566, 582
GsaI CCCAGC 1 cut(s) 506
HaeIII GGCC 6 cut(s) 59, 114, 258, 311, 377, 592
HgaI GACGC 1 cut(s) 148
HhaI GCGC 4 cut(s) 16, 159, 168, 368
Hin1I GRCGYC 1 cut(s) 246
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 4 cut(s) 14, 157, 166, 366
HinP1I GCGC 4 cut(s) 14, 157, 166, 366
HincII GTYRAC 1 cut(s) 220
HindII GTYRAC 1 cut(s) 220
HinfI GANTC 4 cut(s) 183, 236, 647, 672
HphI GGTGA 1 cut(s) 554
Hpy166II GTNNAC 3 cut(s) 139, 220, 545
Hpy188I TCNGA 2 cut(s) 652, 677
Hpy188III TCNNGA 6 cut(s) 199, 240, 262, 389, 480, 523
Hpy8I GTNNAC 3 cut(s) 139, 220, 545
Hpy99I CGWCG 4 cut(s) 65, 251, 352, 535
HpyAV CCTTC 2 cut(s) 104, 625
HpyCH4III ACNGT 1 cut(s) 681
HpyCH4IV ACGT 4 cut(s) 210, 228, 246, 347
HpyCH4V TGCA 3 cut(s) 28, 68, 150
HpyF3I CTNAG 1 cut(s) 649
HpySE526I ACGT 4 cut(s) 210, 228, 246, 347
Hsp92I GRCGYC 1 cut(s) 246
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 4 cut(s) 14, 157, 166, 366
KflI GGGWCCC 1 cut(s) 514
Kpn2I TCCGGA 2 cut(s) 239, 388
KroI GCCGGC 1 cut(s) 588
KroNI GCCGGC 1 cut(s) 590
KspI CCGCGG 1 cut(s) 566
Kzo9I GATC 2 cut(s) 70, 467
LguI GCTCTTC 1 cut(s) 330
LmnI GCTCC 2 cut(s) 53, 617
Lsp1109I GCAGC 2 cut(s) 12, 543
LweI GCATC 1 cut(s) 440
MaeII ACGT 4 cut(s) 210, 228, 246, 347
MaeIII GTNAC 1 cut(s) 472
MalI GATC 2 cut(s) 72, 469
MbiI CCGCTC 2 cut(s) 56, 574
MboI GATC 2 cut(s) 70, 467
MboII GAAGA 3 cut(s) 129, 277, 347
MflI RGATCY 2 cut(s) 70, 467
MhlI GDGCHC 3 cut(s) 48, 342, 509
MluCI AATT 2 cut(s) 194, 685
MlyI GAGTC 2 cut(s) 245, 641
MnlI CCTC 7 cut(s) 3, 113, 269, 308, 385, 487, 491
MroI TCCGGA 2 cut(s) 239, 388
MroNI GCCGGC 1 cut(s) 588
MseI TTAA 4 cut(s) 191, 284, 684, 688
MspA1I CMGCKG 2 cut(s) 328, 565
MspR9I CCNGG 9 cut(s) 35, 36, 48, 206, 301, 371, 594, 630, 631
MvaI CCWGG 1 cut(s) 301
MvnI CGCG 7 cut(s) 16, 159, 166, 168, 352, 565, 584
NaeI GCCGGC 1 cut(s) 590
NciI CCSGG 8 cut(s) 35, 36, 48, 206, 371, 594, 630, 631
NdeII GATC 2 cut(s) 70, 467
NgoMIV GCCGGC 1 cut(s) 588
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 6 cut(s) 131, 257, 323, 469, 515, 516
NspV TTCGAA 1 cut(s) 175
PacI TTAATTAA 1 cut(s) 688
PaeR7I CTCGAG 2 cut(s) 495, 551
PciSI GCTCTTC 1 cut(s) 330
PdiI GCCGGC 1 cut(s) 590
PfeI GAWTC 2 cut(s) 183, 672
PflMI CCANNNNNTGG 1 cut(s) 331
PkrI GCNGC 8 cut(s) 18, 27, 58, 330, 376, 558, 567, 583
PleI GAGTC 2 cut(s) 244, 641
PpsI GAGTC 2 cut(s) 244, 641
PpuMI RGGWCCY 1 cut(s) 514
Psp1406I AACGTT 1 cut(s) 228
Psp5II RGGWCCY 1 cut(s) 514
Psp6I CCWGG 1 cut(s) 299
PspFI CCCAGC 1 cut(s) 502
PspGI CCWGG 1 cut(s) 299
PspN4I GGNNCC 6 cut(s) 131, 257, 323, 469, 515, 516
PspPI GGNCC 6 cut(s) 256, 309, 322, 376, 394, 514
PspPPI RGGWCCY 1 cut(s) 514
PspXI VCTCGAGB 2 cut(s) 495, 551
PstNI CAGNNNCTG 1 cut(s) 331
PsuI RGATCY 2 cut(s) 70, 467
RsaI GTAC 2 cut(s) 420, 660
RsaNI GTAC 2 cut(s) 419, 659
SacII CCGCGG 1 cut(s) 566
SapI GCTCTTC 1 cut(s) 330
SaqAI TTAA 4 cut(s) 191, 284, 684, 688
SatI GCNGC 8 cut(s) 17, 26, 57, 329, 375, 557, 566, 582
Sau3AI GATC 2 cut(s) 70, 467
Sau96I GGNCC 6 cut(s) 256, 309, 322, 376, 394, 514
SchI GAGTC 2 cut(s) 245, 641
ScrFI CCNGG 9 cut(s) 35, 36, 48, 206, 301, 371, 594, 630, 631
SduI GDGCHC 3 cut(s) 48, 342, 509
SetI ASST 9 cut(s) 131, 213, 231, 249, 319, 350, 439, 479, 558
SfaNI GCATC 1 cut(s) 440
Sfr274I CTCGAG 2 cut(s) 495, 551
Sfr303I CCGCGG 1 cut(s) 566
SfuI TTCGAA 1 cut(s) 175
SgrBI CCGCGG 1 cut(s) 566
SinI GGWCC 3 cut(s) 322, 394, 514
SlaI CTCGAG 2 cut(s) 495, 551
SmaI CCCGGG 2 cut(s) 36, 631
SmlI CTYRAG 2 cut(s) 495, 551
SmoI CTYRAG 2 cut(s) 495, 551
Sse9I AATT 2 cut(s) 194, 685
SspI AATATT 1 cut(s) 92
StyD4I CCNGG 9 cut(s) 33, 34, 46, 204, 299, 369, 592, 628, 629
StyI CCWWGG 1 cut(s) 442
TaaI ACNGT 1 cut(s) 681
TaiI ACGT 4 cut(s) 213, 231, 249, 350
TaqI TCGA 3 cut(s) 175, 496, 552
TaqII GACCGA 1 cut(s) 411
TasI AATT 2 cut(s) 194, 685
TauI GCSGC 6 cut(s) 19, 59, 331, 377, 568, 584
TfiI GAWTC 2 cut(s) 183, 672
Tru1I TTAA 4 cut(s) 191, 284, 684, 688
Tru9I TTAA 4 cut(s) 191, 284, 684, 688
TseI GCWGC 2 cut(s) 25, 556
TspGWI ACGGA 3 cut(s) 460, 614, 676
TspMI CCCGGG 2 cut(s) 34, 629
Van91I CCANNNNNTGG 1 cut(s) 331
VpaK11BI GGWCC 3 cut(s) 322, 394, 514
XapI RAATTY 1 cut(s) 194
XhoI CTCGAG 2 cut(s) 495, 551
XmaI CCCGGG 2 cut(s) 34, 629
ZraI GACGTC 1 cut(s) 247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.