Rroxscaffold_59G00442150

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000059
OG0000104
Physical Location & Seq
Reverse (-)
59345 .. 60264
920 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_59G00442150.1

Sequence Viewer

Length: 543 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCCGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGCTTTCCCGGGCGTTCAACAGTCGACTCAGAACTGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

180

Amino Acids

19.58

Weight (kDa)

11.36

Isoelectric Point (pI)

50.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 202
AccBSI CCGCTC 2 cut(s) 56, 363
AccI GTMKAC 1 cut(s) 434
AccII CGCG 5 cut(s) 16, 223, 354, 373, 484
AclWI GGATC 2 cut(s) 250, 263
AcoI YGGCCR 2 cut(s) 57, 379
AcsI RAATTY 1 cut(s) 470
AfiI CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 377, 384, 388, 484
AflII CTTAAG 1 cut(s) 515
AgsI TTSAA 4 cut(s) 96, 110, 428, 475
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 2 cut(s) 33, 166
AluBI AGCT 1 cut(s) 345
AluI AGCT 1 cut(s) 345
Alw21I GWGCWC 2 cut(s) 213, 451
AlwI GGATC 2 cut(s) 250, 263
AlwNI CAGNNNCTG 1 cut(s) 202
Ama87I CYCGRG 3 cut(s) 266, 340, 418
AoxI GGCC 4 cut(s) 57, 112, 155, 379
ApeKI GCWGC 2 cut(s) 25, 345
ApoI RAATTY 1 cut(s) 470
ArsI GACNNNNNNTTYG 1 cut(s) 519
Asp700I GAANNNNTTC 1 cut(s) 470
AspLEI GCGC 2 cut(s) 16, 484
AspS9I GGNCC 2 cut(s) 193, 303
AsuC2I CCSGG 4 cut(s) 48, 383, 419, 420
AsuHPI GGTGA 1 cut(s) 343
AvaI CYCGRG 3 cut(s) 266, 340, 418
AvaII GGWCC 2 cut(s) 193, 303
BaeGI GKGCMC 1 cut(s) 298
BamHI GGATCC 1 cut(s) 255
BanII GRGCYC 1 cut(s) 48
Bbv12I GWGCWC 2 cut(s) 213, 451
BbvI GCAGC 2 cut(s) 12, 332
BceAI ACGGC 4 cut(s) 44, 157, 190, 508
BciT130I CCWGG 2 cut(s) 35, 168
BcnI CCSGG 4 cut(s) 48, 383, 419, 420
BfrI CTTAAG 1 cut(s) 515
BglII AGATCT 1 cut(s) 70
BisI GCNGC 7 cut(s) 17, 26, 57, 200, 346, 355, 371
BlpI GCTNAGC 1 cut(s) 178
BlsI GCNGC 7 cut(s) 18, 27, 58, 201, 347, 356, 372
Bme1390I CCNGG 6 cut(s) 35, 48, 168, 383, 419, 420
Bme18I GGWCC 2 cut(s) 193, 303
BmeT110I CYCGRG 3 cut(s) 266, 340, 418
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 2 cut(s) 193, 303
BmiI GGNNCC 5 cut(s) 131, 194, 257, 304, 305
BmrFI CCNGG 6 cut(s) 35, 48, 168, 383, 419, 420
BmrI ACTGGG 2 cut(s) 301, 403
BmuI ACTGGG 2 cut(s) 301, 403
Bpu1102I GCTNAGC 1 cut(s) 178
BpuMI CCSGG 4 cut(s) 48, 383, 419, 420
BsaJI CCNNGG 6 cut(s) 34, 166, 265, 352, 382, 418
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 177, 207
Bsc4I CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 377, 384, 388, 484
Bse118I RCCGGY 1 cut(s) 377
Bse1I ACTGG 2 cut(s) 307, 398
BseBI CCWGG 2 cut(s) 35, 168
BseDI CCNNGG 6 cut(s) 34, 166, 265, 352, 382, 418
BseLI CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 377, 384, 388, 484
BseMII CTCAG 3 cut(s) 192, 276, 452
BseNI ACTGG 2 cut(s) 307, 398
BseSI GKGCMC 1 cut(s) 298
BseX3I CGGCCG 2 cut(s) 57, 379
BseXI GCAGC 2 cut(s) 12, 332
BseYI CCCAGC 1 cut(s) 291
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 5 cut(s) 16, 223, 354, 373, 484
Bsh1285I CGRYCG 3 cut(s) 23, 60, 382
BshFI GGCC 4 cut(s) 59, 114, 157, 381
BsiEI CGRYCG 3 cut(s) 23, 60, 382
BsiHKAI GWGCWC 2 cut(s) 213, 451
BsiHKCI CYCGRG 3 cut(s) 266, 340, 418
BsiSI CCGG 6 cut(s) 48, 183, 232, 378, 382, 419
BslFI GGGAC 3 cut(s) 289, 295, 400
BslI CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 377, 384, 388, 484
BsmFI GGGAC 3 cut(s) 289, 295, 400
BsnI GGCC 4 cut(s) 59, 114, 157, 381
BsoBI CYCGRG 3 cut(s) 266, 340, 418
Bsp1286I GDGCHC 4 cut(s) 48, 213, 298, 451
Bsp143I GATC 2 cut(s) 70, 255
Bsp1720I GCTNAGC 1 cut(s) 178
BspANI GGCC 4 cut(s) 59, 114, 157, 381
BspCNI CTCAG 3 cut(s) 191, 277, 451
BspFNI CGCG 5 cut(s) 16, 223, 354, 373, 484
BspLI GGNNCC 5 cut(s) 131, 194, 257, 304, 305
BspPI GGATC 2 cut(s) 250, 263
BspQI GCTCTTC 1 cut(s) 201
BspTI CTTAAG 1 cut(s) 515
BsrBI CCGCTC 2 cut(s) 56, 363
BsrFI RCCGGY 1 cut(s) 377
BsrI ACTGG 2 cut(s) 307, 398
BssAI RCCGGY 1 cut(s) 377
BssECI CCNNGG 6 cut(s) 34, 166, 265, 352, 382, 418
BssMI GATC 2 cut(s) 70, 255
Bst2UI CCWGG 2 cut(s) 35, 168
Bst4CI ACNGT 2 cut(s) 432, 446
Bst6I CTCTTC 2 cut(s) 112, 201
BstAFI CTTAAG 1 cut(s) 515
BstC8I GCNNGC 3 cut(s) 159, 375, 379
BstDEI CTNAG 3 cut(s) 178, 285, 438
BstDSI CCRYGG 1 cut(s) 352
BstFNI CGCG 5 cut(s) 16, 223, 354, 373, 484
BstHHI GCGC 2 cut(s) 16, 484
BstKTI GATC 2 cut(s) 73, 258
BstMBI GATC 2 cut(s) 70, 255
BstMCI CGRYCG 3 cut(s) 23, 60, 382
BstMWI GCNNNNNNNGC 9 cut(s) 22, 25, 65, 208, 288, 345, 351, 354, 360
BstNI CCWGG 2 cut(s) 35, 168
BstSCI CCNGG 6 cut(s) 33, 46, 166, 381, 417, 418
BstSLI GKGCMC 1 cut(s) 298
BstUI CGCG 5 cut(s) 16, 223, 354, 373, 484
BstV1I GCAGC 2 cut(s) 12, 332
BstX2I RGATCY 2 cut(s) 70, 255
BstYI RGATCY 2 cut(s) 70, 255
BstZI CGGCCG 2 cut(s) 57, 379
BsuRI GGCC 4 cut(s) 59, 114, 157, 381
BtgI CCRYGG 1 cut(s) 352
BtrI CACGTC 1 cut(s) 219
Cac8I GCNNGC 3 cut(s) 159, 375, 379
CaiI CAGNNNCTG 1 cut(s) 202
CfoI GCGC 2 cut(s) 16, 484
Cfr10I RCCGGY 1 cut(s) 377
Cfr13I GGNCC 2 cut(s) 193, 303
Cfr42I CCGCGG 1 cut(s) 355
Cfr9I CCCGGG 1 cut(s) 418
CviAII CATG 2 cut(s) 134, 153
DdeI CTNAG 3 cut(s) 178, 285, 438
DpnI GATC 2 cut(s) 72, 257
DpnII GATC 2 cut(s) 70, 255
EaeI YGGCCR 2 cut(s) 57, 379
EagI CGGCCG 2 cut(s) 57, 379
Eam1104I CTCTTC 2 cut(s) 112, 201
EarI CTCTTC 2 cut(s) 112, 201
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 2 cut(s) 57, 379
Eco24I GRGCYC 1 cut(s) 48
Eco47I GGWCC 2 cut(s) 193, 303
Eco52I CGGCCG 2 cut(s) 57, 379
Eco88I CYCGRG 3 cut(s) 266, 340, 418
EcoO109I RGGNCCY 1 cut(s) 303
EcoRII CCWGG 2 cut(s) 33, 166
EcoT38I GRGCYC 1 cut(s) 48
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 3 cut(s) 135, 154, 507
FaqI GGGAC 3 cut(s) 289, 295, 400
FatI CATG 2 cut(s) 133, 152
FauI CCCGC 3 cut(s) 356, 477, 488
FblI GTMKAC 1 cut(s) 434
Fnu4HI GCNGC 7 cut(s) 17, 26, 57, 200, 346, 355, 371
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 7 cut(s) 17, 26, 57, 200, 346, 355, 371
GlaI GCGC 2 cut(s) 15, 483
GluI GCNGC 7 cut(s) 17, 26, 57, 200, 346, 355, 371
GsaI CCCAGC 1 cut(s) 295
HaeIII GGCC 4 cut(s) 59, 114, 157, 381
HapII CCGG 6 cut(s) 48, 183, 232, 378, 382, 419
HhaI GCGC 2 cut(s) 16, 484
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 2 cut(s) 14, 482
HinP1I GCGC 2 cut(s) 14, 482
HincII GTYRAC 1 cut(s) 435
HindII GTYRAC 1 cut(s) 435
HinfI GANTC 2 cut(s) 436, 509
HpaII CCGG 6 cut(s) 48, 183, 232, 378, 382, 419
HphI GGTGA 1 cut(s) 343
Hpy166II GTNNAC 4 cut(s) 139, 334, 435, 490
Hpy188I TCNGA 3 cut(s) 286, 441, 453
Hpy188III TCNNGA 2 cut(s) 268, 312
Hpy8I GTNNAC 4 cut(s) 139, 334, 435, 490
Hpy99I CGWCG 3 cut(s) 65, 223, 324
HpyAV CCTTC 2 cut(s) 104, 415
HpyCH4III ACNGT 2 cut(s) 432, 446
HpyCH4IV ACGT 1 cut(s) 218
HpyCH4V TGCA 3 cut(s) 28, 68, 150
HpyF10VI GCNNNNNNNGC 9 cut(s) 22, 25, 65, 208, 288, 345, 351, 354, 360
HpyF3I CTNAG 3 cut(s) 178, 285, 438
HpySE526I ACGT 1 cut(s) 218
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 2 cut(s) 14, 482
KflI GGGWCCC 1 cut(s) 303
KroI GCCGGC 1 cut(s) 377
KroNI GCCGGC 1 cut(s) 379
KspI CCGCGG 1 cut(s) 355
Kzo9I GATC 2 cut(s) 70, 255
LguI GCTCTTC 1 cut(s) 201
LmnI GCTCC 2 cut(s) 53, 407
Lsp1109I GCAGC 2 cut(s) 12, 332
MaeII ACGT 1 cut(s) 218
MaeIII GTNAC 2 cut(s) 260, 500
MalI GATC 2 cut(s) 72, 257
MbiI CCGCTC 2 cut(s) 56, 363
MboI GATC 2 cut(s) 70, 255
MboII GAAGA 3 cut(s) 129, 218, 478
MflI RGATCY 2 cut(s) 70, 255
MhlI GDGCHC 4 cut(s) 48, 213, 298, 451
MluCI AATT 1 cut(s) 470
MlyI GAGTC 2 cut(s) 430, 503
MnlI CCTC 6 cut(s) 3, 113, 179, 275, 280, 542
MroNI GCCGGC 1 cut(s) 377
MroXI GAANNNNTTC 1 cut(s) 470
MseI TTAA 1 cut(s) 516
MspA1I CMGCKG 2 cut(s) 199, 354
MspCI CTTAAG 1 cut(s) 515
MspI CCGG 6 cut(s) 48, 183, 232, 378, 382, 419
MspR9I CCNGG 6 cut(s) 35, 48, 168, 383, 419, 420
MvaI CCWGG 2 cut(s) 35, 168
MvnI CGCG 5 cut(s) 16, 223, 354, 373, 484
MwoI GCNNNNNNNGC 9 cut(s) 22, 25, 65, 208, 288, 345, 351, 354, 360
NaeI GCCGGC 1 cut(s) 379
NciI CCSGG 4 cut(s) 48, 383, 419, 420
NdeII GATC 2 cut(s) 70, 255
NgoMIV GCCGGC 1 cut(s) 377
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 5 cut(s) 131, 194, 257, 304, 305
PaeR7I CTCGAG 1 cut(s) 340
PciSI GCTCTTC 1 cut(s) 201
PdiI GCCGGC 1 cut(s) 379
PdmI GAANNNNTTC 1 cut(s) 470
PflMI CCANNNNNTGG 1 cut(s) 202
PkrI GCNGC 7 cut(s) 18, 27, 58, 201, 347, 356, 372
PleI GAGTC 2 cut(s) 430, 503
PpsI GAGTC 2 cut(s) 430, 503
PpuMI RGGWCCY 1 cut(s) 303
Psp5II RGGWCCY 1 cut(s) 303
Psp6I CCWGG 2 cut(s) 33, 166
PspFI CCCAGC 1 cut(s) 291
PspGI CCWGG 2 cut(s) 33, 166
PspN4I GGNNCC 5 cut(s) 131, 194, 257, 304, 305
PspPI GGNCC 2 cut(s) 193, 303
PspPPI RGGWCCY 1 cut(s) 303
PspXI VCTCGAGB 1 cut(s) 340
PstNI CAGNNNCTG 1 cut(s) 202
PsuI RGATCY 2 cut(s) 70, 255
SacII CCGCGG 1 cut(s) 355
SalI GTCGAC 1 cut(s) 433
SapI GCTCTTC 1 cut(s) 201
SaqAI TTAA 1 cut(s) 516
SatI GCNGC 7 cut(s) 17, 26, 57, 200, 346, 355, 371
Sau3AI GATC 2 cut(s) 70, 255
Sau96I GGNCC 2 cut(s) 193, 303
SchI GAGTC 2 cut(s) 430, 503
ScrFI CCNGG 6 cut(s) 35, 48, 168, 383, 419, 420
SduI GDGCHC 4 cut(s) 48, 213, 298, 451
SetI ASST 7 cut(s) 36, 131, 190, 221, 267, 347, 522
Sfr274I CTCGAG 1 cut(s) 340
Sfr303I CCGCGG 1 cut(s) 355
SgrBI CCGCGG 1 cut(s) 355
SinI GGWCC 2 cut(s) 193, 303
SlaI CTCGAG 1 cut(s) 340
SmaI CCCGGG 1 cut(s) 420
SmlI CTYRAG 2 cut(s) 340, 515
SmoI CTYRAG 2 cut(s) 340, 515
Sse9I AATT 1 cut(s) 470
SspI AATATT 1 cut(s) 92
StyD4I CCNGG 6 cut(s) 33, 46, 166, 381, 417, 418
TaaI ACNGT 2 cut(s) 432, 446
TaiI ACGT 1 cut(s) 221
TaqI TCGA 2 cut(s) 341, 434
TasI AATT 1 cut(s) 470
TauI GCSGC 5 cut(s) 19, 59, 202, 357, 373
Tru1I TTAA 1 cut(s) 516
Tru9I TTAA 1 cut(s) 516
TseI GCWGC 2 cut(s) 25, 345
TspGWI ACGGA 2 cut(s) 248, 404
TspMI CCCGGG 1 cut(s) 418
Van91I CCANNNNNTGG 1 cut(s) 202
Vha464I CTTAAG 1 cut(s) 515
VpaK11BI GGWCC 2 cut(s) 193, 303
XapI RAATTY 1 cut(s) 470
XhoI CTCGAG 1 cut(s) 340
XmaI CCCGGG 1 cut(s) 418
XmiI GTMKAC 1 cut(s) 434
XmnI GAANNNNTTC 1 cut(s) 470
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.