Rroxscaffold_6G00387790

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000104
Physical Location & Seq
Forward (+)
38370 .. 40726
2357 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00387790.1

Sequence Viewer

Length: 597 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCCGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGCCTGCCCACCCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCCGGCGTTCAACAGTCGACTCAGAACTGACGCTTCCTAACGAATGCGATGCCAAGCCAAGGCTAGGCAATGCCGTGGCTGACAGAGGCTTCCTAGCGAAGGATAATGCAATGCCGAGCCAAGGCTTTGCCAAGACAATGCCAAGGCTTGCTAGTGAGGCTAATGCAATGTCAAGCCAAGGCTTGCCAAGACAATGCCAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

198

Amino Acids

21.3

Weight (kDa)

11.27

Isoelectric Point (pI)

65.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 175
AccBSI CCGCTC 2 cut(s) 56, 336
AccI GTMKAC 1 cut(s) 408
AccII CGCG 4 cut(s) 16, 196, 327, 346
AclWI GGATC 2 cut(s) 223, 236
AcoI YGGCCR 2 cut(s) 57, 352
AgsI TTSAA 3 cut(s) 96, 110, 402
AjiI CACGTC 1 cut(s) 192
AjnI CCWGG 2 cut(s) 33, 139
AluBI AGCT 1 cut(s) 318
AluI AGCT 1 cut(s) 318
Alw21I GWGCWC 1 cut(s) 186
AlwI GGATC 2 cut(s) 223, 236
AlwNI CAGNNNCTG 1 cut(s) 175
Ama87I CYCGRG 2 cut(s) 239, 313
AoxI GGCC 3 cut(s) 57, 112, 352
ApeKI GCWGC 2 cut(s) 25, 318
AspLEI GCGC 1 cut(s) 16
AspS9I GGNCC 2 cut(s) 166, 276
AsuC2I CCSGG 3 cut(s) 48, 356, 394
AsuHPI GGTGA 1 cut(s) 316
AvaI CYCGRG 2 cut(s) 239, 313
AvaII GGWCC 2 cut(s) 166, 276
BaeGI GKGCMC 1 cut(s) 271
BamHI GGATCC 1 cut(s) 228
BanII GRGCYC 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 186
BbvI GCAGC 2 cut(s) 12, 305
BceAI ACGGC 3 cut(s) 44, 163, 449
BcgI CGANNNNNNTGC 2 cut(s) 422, 456
BciT130I CCWGG 2 cut(s) 35, 141
BcnI CCSGG 3 cut(s) 48, 356, 394
BfaI CTAG 4 cut(s) 455, 485, 543, 595
BglII AGATCT 1 cut(s) 70
BisI GCNGC 7 cut(s) 17, 26, 57, 173, 319, 328, 344
BlpI GCTNAGC 1 cut(s) 151
BlsI GCNGC 7 cut(s) 18, 27, 58, 174, 320, 329, 345
Bme1390I CCNGG 5 cut(s) 35, 48, 141, 356, 394
Bme18I GGWCC 2 cut(s) 166, 276
BmeT110I CYCGRG 2 cut(s) 239, 313
BmgBI CACGTC 1 cut(s) 192
BmgT120I GGNCC 2 cut(s) 166, 276
BmiI GGNNCC 4 cut(s) 167, 230, 277, 278
BmrFI CCNGG 5 cut(s) 35, 48, 141, 356, 394
BmrI ACTGGG 2 cut(s) 274, 376
BmsI GCATC 1 cut(s) 430
BmuI ACTGGG 2 cut(s) 274, 376
Bpu1102I GCTNAGC 1 cut(s) 151
BpuMI CCSGG 3 cut(s) 48, 356, 394
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 150, 180
Bse118I RCCGGY 1 cut(s) 350
Bse1I ACTGG 2 cut(s) 280, 371
Bse3DI GCAATG 3 cut(s) 466, 507, 564
BseBI CCWGG 2 cut(s) 35, 141
BseMI GCAATG 3 cut(s) 466, 507, 564
BseMII CTCAG 3 cut(s) 165, 249, 426
BseNI ACTGG 2 cut(s) 280, 371
BseSI GKGCMC 1 cut(s) 271
BseX3I CGGCCG 2 cut(s) 57, 352
BseXI GCAGC 2 cut(s) 12, 305
BseYI CCCAGC 1 cut(s) 264
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 4 cut(s) 16, 196, 327, 346
Bsh1285I CGRYCG 3 cut(s) 23, 60, 355
BshFI GGCC 3 cut(s) 59, 114, 354
BsiEI CGRYCG 3 cut(s) 23, 60, 355
BsiHKAI GWGCWC 1 cut(s) 186
BsiHKCI CYCGRG 2 cut(s) 239, 313
BsiSI CCGG 6 cut(s) 48, 156, 205, 351, 355, 394
BslFI GGGAC 3 cut(s) 262, 268, 373
BsmFI GGGAC 3 cut(s) 262, 268, 373
BsmI GAATGC 1 cut(s) 440
BsnI GGCC 3 cut(s) 59, 114, 354
BsoBI CYCGRG 2 cut(s) 239, 313
Bsp1286I GDGCHC 3 cut(s) 48, 186, 271
Bsp143I GATC 2 cut(s) 70, 228
Bsp1720I GCTNAGC 1 cut(s) 151
BspANI GGCC 3 cut(s) 59, 114, 354
BspCNI CTCAG 3 cut(s) 164, 250, 425
BspFNI CGCG 4 cut(s) 16, 196, 327, 346
BspLI GGNNCC 4 cut(s) 167, 230, 277, 278
BspPI GGATC 2 cut(s) 223, 236
BspQI GCTCTTC 1 cut(s) 174
BsrBI CCGCTC 2 cut(s) 56, 336
BsrDI GCAATG 3 cut(s) 466, 507, 564
BsrFI RCCGGY 1 cut(s) 350
BsrI ACTGG 2 cut(s) 280, 371
BssAI RCCGGY 1 cut(s) 350
BssMI GATC 2 cut(s) 70, 228
BssT1I CCWWGG 5 cut(s) 449, 511, 533, 568, 589
Bst2UI CCWGG 2 cut(s) 35, 141
Bst4CI ACNGT 1 cut(s) 406
Bst6I CTCTTC 2 cut(s) 112, 174
BstC8I GCNNGC 5 cut(s) 131, 348, 352, 540, 575
BstDEI CTNAG 3 cut(s) 151, 258, 412
BstDSI CCRYGG 2 cut(s) 325, 465
BstENI CCTNNNNNAGG 1 cut(s) 488
BstFNI CGCG 4 cut(s) 16, 196, 327, 346
BstHHI GCGC 1 cut(s) 16
BstKTI GATC 2 cut(s) 73, 231
BstMBI GATC 2 cut(s) 70, 228
BstMCI CGRYCG 3 cut(s) 23, 60, 355
BstNI CCWGG 2 cut(s) 35, 141
BstSCI CCNGG 5 cut(s) 33, 46, 139, 354, 392
BstSLI GKGCMC 1 cut(s) 271
BstUI CGCG 4 cut(s) 16, 196, 327, 346
BstV1I GCAGC 2 cut(s) 12, 305
BstX2I RGATCY 2 cut(s) 70, 228
BstYI RGATCY 2 cut(s) 70, 228
BstZI CGGCCG 2 cut(s) 57, 352
BsuRI GGCC 3 cut(s) 59, 114, 354
BtgI CCRYGG 2 cut(s) 325, 465
BtgZI GCGATG 1 cut(s) 453
BtrI CACGTC 1 cut(s) 192
Cac8I GCNNGC 5 cut(s) 131, 348, 352, 540, 575
CaiI CAGNNNCTG 1 cut(s) 175
CfoI GCGC 1 cut(s) 16
Cfr10I RCCGGY 1 cut(s) 350
Cfr13I GGNCC 2 cut(s) 166, 276
Cfr42I CCGCGG 1 cut(s) 328
CseI GACGC 1 cut(s) 430
DdeI CTNAG 3 cut(s) 151, 258, 412
DpnI GATC 2 cut(s) 72, 230
DpnII GATC 2 cut(s) 70, 228
EaeI YGGCCR 2 cut(s) 57, 352
EagI CGGCCG 2 cut(s) 57, 352
Eam1104I CTCTTC 2 cut(s) 112, 174
EarI CTCTTC 2 cut(s) 112, 174
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 2 cut(s) 57, 352
Eco130I CCWWGG 5 cut(s) 449, 511, 533, 568, 589
Eco24I GRGCYC 1 cut(s) 48
Eco47I GGWCC 2 cut(s) 166, 276
Eco52I CGGCCG 2 cut(s) 57, 352
Eco88I CYCGRG 2 cut(s) 239, 313
EcoNI CCTNNNNNAGG 1 cut(s) 488
EcoO109I RGGNCCY 1 cut(s) 276
EcoRII CCWGG 2 cut(s) 33, 139
EcoT14I CCWWGG 5 cut(s) 449, 511, 533, 568, 589
EcoT38I GRGCYC 1 cut(s) 48
ErhI CCWWGG 5 cut(s) 449, 511, 533, 568, 589
FaqI GGGAC 3 cut(s) 262, 268, 373
FauI CCCGC 1 cut(s) 329
FblI GTMKAC 1 cut(s) 408
Fnu4HI GCNGC 7 cut(s) 17, 26, 57, 173, 319, 328, 344
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 7 cut(s) 17, 26, 57, 173, 319, 328, 344
FspBI CTAG 4 cut(s) 455, 485, 543, 595
GlaI GCGC 1 cut(s) 15
GluI GCNGC 7 cut(s) 17, 26, 57, 173, 319, 328, 344
GsaI CCCAGC 1 cut(s) 268
HaeIII GGCC 3 cut(s) 59, 114, 354
HapII CCGG 6 cut(s) 48, 156, 205, 351, 355, 394
HgaI GACGC 1 cut(s) 430
HhaI GCGC 1 cut(s) 16
Hin6I GCGC 1 cut(s) 14
HinP1I GCGC 1 cut(s) 14
HincII GTYRAC 1 cut(s) 409
HindII GTYRAC 1 cut(s) 409
HinfI GANTC 1 cut(s) 410
HpaII CCGG 6 cut(s) 48, 156, 205, 351, 355, 394
HphI GGTGA 1 cut(s) 316
Hpy166II GTNNAC 2 cut(s) 307, 409
Hpy188I TCNGA 2 cut(s) 259, 415
Hpy188III TCNNGA 2 cut(s) 241, 285
Hpy8I GTNNAC 2 cut(s) 307, 409
Hpy99I CGWCG 3 cut(s) 65, 196, 297
HpyAV CCTTC 3 cut(s) 104, 388, 484
HpyCH4III ACNGT 1 cut(s) 406
HpyCH4IV ACGT 1 cut(s) 191
HpyCH4V TGCA 4 cut(s) 28, 68, 500, 557
HpyF3I CTNAG 3 cut(s) 151, 258, 412
HpySE526I ACGT 1 cut(s) 191
HspAI GCGC 1 cut(s) 14
KflI GGGWCCC 1 cut(s) 276
KroI GCCGGC 1 cut(s) 350
KroNI GCCGGC 1 cut(s) 352
KspI CCGCGG 1 cut(s) 328
Kzo9I GATC 2 cut(s) 70, 228
LguI GCTCTTC 1 cut(s) 174
LmnI GCTCC 2 cut(s) 53, 380
Lsp1109I GCAGC 2 cut(s) 12, 305
LweI GCATC 1 cut(s) 430
MaeI CTAG 4 cut(s) 455, 485, 543, 595
MaeII ACGT 1 cut(s) 191
MaeIII GTNAC 1 cut(s) 233
MalI GATC 2 cut(s) 72, 230
MbiI CCGCTC 2 cut(s) 56, 336
MboI GATC 2 cut(s) 70, 228
MboII GAAGA 2 cut(s) 129, 191
MflI RGATCY 2 cut(s) 70, 228
MhlI GDGCHC 3 cut(s) 48, 186, 271
MlyI GAGTC 1 cut(s) 404
MnlI CCTC 7 cut(s) 3, 113, 152, 248, 253, 470, 541
MroNI GCCGGC 1 cut(s) 350
MspA1I CMGCKG 2 cut(s) 172, 327
MspI CCGG 6 cut(s) 48, 156, 205, 351, 355, 394
MspR9I CCNGG 5 cut(s) 35, 48, 141, 356, 394
Mva1269I GAATGC 1 cut(s) 440
MvaI CCWGG 2 cut(s) 35, 141
MvnI CGCG 4 cut(s) 16, 196, 327, 346
NaeI GCCGGC 1 cut(s) 352
NciI CCSGG 3 cut(s) 48, 356, 394
NdeII GATC 2 cut(s) 70, 228
NgoMIV GCCGGC 1 cut(s) 350
NlaIV GGNNCC 4 cut(s) 167, 230, 277, 278
NmeAIII GCCGAG 1 cut(s) 531
PaeR7I CTCGAG 1 cut(s) 313
PciSI GCTCTTC 1 cut(s) 174
PctI GAATGC 1 cut(s) 440
PdiI GCCGGC 1 cut(s) 352
PflMI CCANNNNNTGG 1 cut(s) 175
PkrI GCNGC 7 cut(s) 18, 27, 58, 174, 320, 329, 345
PleI GAGTC 1 cut(s) 404
PpsI GAGTC 1 cut(s) 404
PpuMI RGGWCCY 1 cut(s) 276
Psp5II RGGWCCY 1 cut(s) 276
Psp6I CCWGG 2 cut(s) 33, 139
PspFI CCCAGC 1 cut(s) 264
PspGI CCWGG 2 cut(s) 33, 139
PspN4I GGNNCC 4 cut(s) 167, 230, 277, 278
PspPI GGNCC 2 cut(s) 166, 276
PspPPI RGGWCCY 1 cut(s) 276
PspXI VCTCGAGB 1 cut(s) 313
PstNI CAGNNNCTG 1 cut(s) 175
PsuI RGATCY 2 cut(s) 70, 228
SacII CCGCGG 1 cut(s) 328
SalI GTCGAC 1 cut(s) 407
SapI GCTCTTC 1 cut(s) 174
SatI GCNGC 7 cut(s) 17, 26, 57, 173, 319, 328, 344
Sau3AI GATC 2 cut(s) 70, 228
Sau96I GGNCC 2 cut(s) 166, 276
SchI GAGTC 1 cut(s) 404
ScrFI CCNGG 5 cut(s) 35, 48, 141, 356, 394
SduI GDGCHC 3 cut(s) 48, 186, 271
SetI ASST 5 cut(s) 36, 163, 194, 240, 320
SfaNI GCATC 1 cut(s) 430
Sfr274I CTCGAG 1 cut(s) 313
Sfr303I CCGCGG 1 cut(s) 328
SgrBI CCGCGG 1 cut(s) 328
SinI GGWCC 2 cut(s) 166, 276
SlaI CTCGAG 1 cut(s) 313
SmlI CTYRAG 1 cut(s) 313
SmoI CTYRAG 1 cut(s) 313
SspI AATATT 1 cut(s) 92
SspMI CTAG 4 cut(s) 455, 485, 543, 595
StyD4I CCNGG 5 cut(s) 33, 46, 139, 354, 392
StyI CCWWGG 5 cut(s) 449, 511, 533, 568, 589
TaaI ACNGT 1 cut(s) 406
TaiI ACGT 1 cut(s) 194
TaqI TCGA 2 cut(s) 314, 408
TauI GCSGC 5 cut(s) 19, 59, 175, 330, 346
TseI GCWGC 2 cut(s) 25, 318
TspGWI ACGGA 2 cut(s) 221, 377
Van91I CCANNNNNTGG 1 cut(s) 175
VpaK11BI GGWCC 2 cut(s) 166, 276
XagI CCTNNNNNAGG 1 cut(s) 488
XhoI CTCGAG 1 cut(s) 313
XmiI GTMKAC 1 cut(s) 408
XspI CTAG 4 cut(s) 455, 485, 543, 595
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.