Rroxscaffold_73G00439090

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000073
OG0000104
Physical Location & Seq
Reverse (-)
39753 .. 42106
2354 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_73G00439090.1

Sequence Viewer

Length: 696 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCCGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGCCTGCCCACCCCGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGCCTGGGCACGGGGGTCCCGGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACAGTCGACTCGAACTGTGCTGCGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGACGCTTCCTAACGAATGCGATGCCAAGCCAAGGCTAGGCAATGCCGTGGCTGACAGAGGCTTCCTAGCGAAGGATAATGCAATGCCGAGCCAAGGCTTTGCCAAGACAATGCCAAGGCTTGCTAGTGAGGCTAATGCAATGTCAAGCCAAGGCTTGCCAAGACAATGCCAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

231

Amino Acids

24.74

Weight (kDa)

10.44

Isoelectric Point (pI)

51.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 202
AccBSI CCGCTC 2 cut(s) 56, 364
AccI GTMKAC 1 cut(s) 435
AccII CGCG 5 cut(s) 16, 223, 355, 374, 484
AclWI GGATC 2 cut(s) 250, 263
AcoI YGGCCR 2 cut(s) 57, 380
AcsI RAATTY 1 cut(s) 470
AflII CTTAAG 1 cut(s) 515
AgsI TTSAA 4 cut(s) 96, 110, 429, 475
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 2 cut(s) 33, 291
AluBI AGCT 1 cut(s) 346
AluI AGCT 1 cut(s) 346
Alw21I GWGCWC 1 cut(s) 213
AlwI GGATC 2 cut(s) 250, 263
AlwNI CAGNNNCTG 1 cut(s) 202
Ama87I CYCGRG 3 cut(s) 266, 341, 419
AoxI GGCC 5 cut(s) 57, 112, 155, 289, 380
ApeKI GCWGC 4 cut(s) 25, 282, 346, 449
ApoI RAATTY 1 cut(s) 470
Asp700I GAANNNNTTC 1 cut(s) 470
AspLEI GCGC 2 cut(s) 16, 484
AspS9I GGNCC 4 cut(s) 193, 289, 304, 310
AsuC2I CCSGG 6 cut(s) 48, 168, 308, 384, 420, 421
AsuHPI GGTGA 1 cut(s) 344
AvaI CYCGRG 3 cut(s) 266, 341, 419
AvaII GGWCC 3 cut(s) 193, 304, 310
BaeGI GKGCMC 1 cut(s) 299
BamHI GGATCC 1 cut(s) 255
BanII GRGCYC 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 213
BbvI GCAGC 4 cut(s) 12, 269, 333, 436
BceAI ACGGC 5 cut(s) 44, 157, 190, 508, 548
BcgI CGANNNNNNTGC 2 cut(s) 521, 555
BciT130I CCWGG 2 cut(s) 35, 293
BcnI CCSGG 6 cut(s) 48, 168, 308, 384, 420, 421
BfaI CTAG 4 cut(s) 554, 584, 642, 694
BfrI CTTAAG 1 cut(s) 515
BglII AGATCT 1 cut(s) 70
BisI GCNGC 9 cut(s) 17, 26, 57, 200, 283, 347, 356, 372, 450
BlpI GCTNAGC 1 cut(s) 178
BlsI GCNGC 9 cut(s) 18, 27, 58, 201, 284, 348, 357, 373, 451
Bme1390I CCNGG 8 cut(s) 35, 48, 168, 293, 308, 384, 420, 421
Bme18I GGWCC 3 cut(s) 193, 304, 310
BmeT110I CYCGRG 3 cut(s) 266, 341, 419
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 4 cut(s) 193, 289, 304, 310
BmiI GGNNCC 6 cut(s) 131, 194, 257, 305, 306, 312
BmrFI CCNGG 8 cut(s) 35, 48, 168, 293, 308, 384, 420, 421
BmrI ACTGGG 1 cut(s) 403
BmsI GCATC 1 cut(s) 529
BmuI ACTGGG 1 cut(s) 403
Bpu1102I GCTNAGC 1 cut(s) 178
BpuMI CCSGG 6 cut(s) 48, 168, 308, 384, 420, 421
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 177, 207
Bse118I RCCGGY 1 cut(s) 378
Bse1I ACTGG 1 cut(s) 398
Bse3DI GCAATG 3 cut(s) 565, 606, 663
BseBI CCWGG 2 cut(s) 35, 293
BseMI GCAATG 3 cut(s) 565, 606, 663
BseMII CTCAG 1 cut(s) 192
BseNI ACTGG 1 cut(s) 398
BseSI GKGCMC 1 cut(s) 299
BseX3I CGGCCG 2 cut(s) 57, 380
BseXI GCAGC 4 cut(s) 12, 269, 333, 436
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 5 cut(s) 16, 223, 355, 374, 484
Bsh1285I CGRYCG 3 cut(s) 23, 60, 383
BshFI GGCC 5 cut(s) 59, 114, 157, 291, 382
BsiEI CGRYCG 3 cut(s) 23, 60, 383
BsiHKAI GWGCWC 1 cut(s) 213
BsiHKCI CYCGRG 3 cut(s) 266, 341, 419
BsiSI CCGG 8 cut(s) 48, 168, 183, 232, 308, 379, 383, 420
BslFI GGGAC 3 cut(s) 290, 296, 400
BsmFI GGGAC 3 cut(s) 290, 296, 400
BsmI GAATGC 1 cut(s) 539
BsnI GGCC 5 cut(s) 59, 114, 157, 291, 382
BsoBI CYCGRG 3 cut(s) 266, 341, 419
Bsp1286I GDGCHC 3 cut(s) 48, 213, 299
Bsp143I GATC 2 cut(s) 70, 255
Bsp1720I GCTNAGC 1 cut(s) 178
BspANI GGCC 5 cut(s) 59, 114, 157, 291, 382
BspCNI CTCAG 1 cut(s) 191
BspFNI CGCG 5 cut(s) 16, 223, 355, 374, 484
BspLI GGNNCC 6 cut(s) 131, 194, 257, 305, 306, 312
BspPI GGATC 2 cut(s) 250, 263
BspQI GCTCTTC 1 cut(s) 201
BspTI CTTAAG 1 cut(s) 515
BsrBI CCGCTC 2 cut(s) 56, 364
BsrDI GCAATG 3 cut(s) 565, 606, 663
BsrFI RCCGGY 1 cut(s) 378
BsrI ACTGG 1 cut(s) 398
BssAI RCCGGY 1 cut(s) 378
BssMI GATC 2 cut(s) 70, 255
BssT1I CCWWGG 5 cut(s) 548, 610, 632, 667, 688
Bst2UI CCWGG 2 cut(s) 35, 293
Bst4CI ACNGT 2 cut(s) 433, 446
Bst6I CTCTTC 2 cut(s) 112, 201
BstAFI CTTAAG 1 cut(s) 515
BstC8I GCNNGC 5 cut(s) 159, 376, 380, 639, 674
BstDEI CTNAG 1 cut(s) 178
BstDSI CCRYGG 2 cut(s) 353, 564
BstENI CCTNNNNNAGG 1 cut(s) 587
BstFNI CGCG 5 cut(s) 16, 223, 355, 374, 484
BstHHI GCGC 2 cut(s) 16, 484
BstKTI GATC 2 cut(s) 73, 258
BstMBI GATC 2 cut(s) 70, 255
BstMCI CGRYCG 3 cut(s) 23, 60, 383
BstNI CCWGG 2 cut(s) 35, 293
BstSCI CCNGG 8 cut(s) 33, 46, 166, 291, 306, 382, 418, 419
BstSLI GKGCMC 1 cut(s) 299
BstUI CGCG 5 cut(s) 16, 223, 355, 374, 484
BstV1I GCAGC 4 cut(s) 12, 269, 333, 436
BstX2I RGATCY 2 cut(s) 70, 255
BstYI RGATCY 2 cut(s) 70, 255
BstZI CGGCCG 2 cut(s) 57, 380
BsuRI GGCC 5 cut(s) 59, 114, 157, 291, 382
BtgI CCRYGG 2 cut(s) 353, 564
BtgZI GCGATG 1 cut(s) 552
BtrI CACGTC 1 cut(s) 219
Cac8I GCNNGC 5 cut(s) 159, 376, 380, 639, 674
CaiI CAGNNNCTG 1 cut(s) 202
CfoI GCGC 2 cut(s) 16, 484
Cfr10I RCCGGY 1 cut(s) 378
Cfr13I GGNCC 4 cut(s) 193, 289, 304, 310
Cfr42I CCGCGG 1 cut(s) 356
Cfr9I CCCGGG 1 cut(s) 419
CseI GACGC 1 cut(s) 529
CviAII CATG 2 cut(s) 134, 153
DdeI CTNAG 1 cut(s) 178
DpnI GATC 2 cut(s) 72, 257
DpnII GATC 2 cut(s) 70, 255
EaeI YGGCCR 2 cut(s) 57, 380
EagI CGGCCG 2 cut(s) 57, 380
Eam1104I CTCTTC 2 cut(s) 112, 201
EarI CTCTTC 2 cut(s) 112, 201
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 2 cut(s) 57, 380
Eco130I CCWWGG 5 cut(s) 548, 610, 632, 667, 688
Eco24I GRGCYC 1 cut(s) 48
Eco47I GGWCC 3 cut(s) 193, 304, 310
Eco52I CGGCCG 2 cut(s) 57, 380
Eco88I CYCGRG 3 cut(s) 266, 341, 419
EcoNI CCTNNNNNAGG 1 cut(s) 587
EcoO109I RGGNCCY 2 cut(s) 289, 304
EcoRII CCWGG 2 cut(s) 33, 291
EcoT14I CCWWGG 5 cut(s) 548, 610, 632, 667, 688
EcoT38I GRGCYC 1 cut(s) 48
ErhI CCWWGG 5 cut(s) 548, 610, 632, 667, 688
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 3 cut(s) 135, 154, 507
FaqI GGGAC 3 cut(s) 290, 296, 400
FatI CATG 2 cut(s) 133, 152
FauI CCCGC 3 cut(s) 357, 477, 488
FblI GTMKAC 1 cut(s) 435
Fnu4HI GCNGC 9 cut(s) 17, 26, 57, 200, 283, 347, 356, 372, 450
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 9 cut(s) 17, 26, 57, 200, 283, 347, 356, 372, 450
FspBI CTAG 4 cut(s) 554, 584, 642, 694
GlaI GCGC 2 cut(s) 15, 483
GluI GCNGC 9 cut(s) 17, 26, 57, 200, 283, 347, 356, 372, 450
HaeIII GGCC 5 cut(s) 59, 114, 157, 291, 382
HapII CCGG 8 cut(s) 48, 168, 183, 232, 308, 379, 383, 420
HgaI GACGC 1 cut(s) 529
HhaI GCGC 2 cut(s) 16, 484
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 2 cut(s) 14, 482
HinP1I GCGC 2 cut(s) 14, 482
HincII GTYRAC 1 cut(s) 436
HindII GTYRAC 1 cut(s) 436
HinfI GANTC 2 cut(s) 437, 509
HpaII CCGG 8 cut(s) 48, 168, 183, 232, 308, 379, 383, 420
HphI GGTGA 1 cut(s) 344
Hpy166II GTNNAC 4 cut(s) 139, 335, 436, 490
Hpy188III TCNNGA 2 cut(s) 268, 313
Hpy8I GTNNAC 4 cut(s) 139, 335, 436, 490
Hpy99I CGWCG 3 cut(s) 65, 223, 325
HpyAV CCTTC 3 cut(s) 104, 415, 583
HpyCH4III ACNGT 2 cut(s) 433, 446
HpyCH4IV ACGT 1 cut(s) 218
HpyCH4V TGCA 5 cut(s) 28, 68, 150, 599, 656
HpyF3I CTNAG 1 cut(s) 178
HpySE526I ACGT 1 cut(s) 218
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 2 cut(s) 14, 482
KflI GGGWCCC 1 cut(s) 304
KroI GCCGGC 1 cut(s) 378
KroNI GCCGGC 1 cut(s) 380
KspI CCGCGG 1 cut(s) 356
Kzo9I GATC 2 cut(s) 70, 255
LguI GCTCTTC 1 cut(s) 201
LmnI GCTCC 2 cut(s) 53, 407
Lsp1109I GCAGC 4 cut(s) 12, 269, 333, 436
LweI GCATC 1 cut(s) 529
MaeI CTAG 4 cut(s) 554, 584, 642, 694
MaeII ACGT 1 cut(s) 218
MaeIII GTNAC 2 cut(s) 260, 500
MalI GATC 2 cut(s) 72, 257
MbiI CCGCTC 2 cut(s) 56, 364
MboI GATC 2 cut(s) 70, 255
MboII GAAGA 3 cut(s) 129, 218, 478
MflI RGATCY 2 cut(s) 70, 255
MhlI GDGCHC 3 cut(s) 48, 213, 299
MluCI AATT 1 cut(s) 470
MlyI GAGTC 2 cut(s) 431, 503
MnlI CCTC 7 cut(s) 3, 113, 179, 275, 280, 569, 640
MroNI GCCGGC 1 cut(s) 378
MroXI GAANNNNTTC 1 cut(s) 470
MseI TTAA 1 cut(s) 516
MspA1I CMGCKG 2 cut(s) 199, 355
MspCI CTTAAG 1 cut(s) 515
MspI CCGG 8 cut(s) 48, 168, 183, 232, 308, 379, 383, 420
MspR9I CCNGG 8 cut(s) 35, 48, 168, 293, 308, 384, 420, 421
Mva1269I GAATGC 1 cut(s) 539
MvaI CCWGG 2 cut(s) 35, 293
MvnI CGCG 5 cut(s) 16, 223, 355, 374, 484
NaeI GCCGGC 1 cut(s) 380
NciI CCSGG 6 cut(s) 48, 168, 308, 384, 420, 421
NdeII GATC 2 cut(s) 70, 255
NgoMIV GCCGGC 1 cut(s) 378
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 6 cut(s) 131, 194, 257, 305, 306, 312
NmeAIII GCCGAG 1 cut(s) 630
PaeR7I CTCGAG 1 cut(s) 341
PciSI GCTCTTC 1 cut(s) 201
PctI GAATGC 1 cut(s) 539
PdiI GCCGGC 1 cut(s) 380
PdmI GAANNNNTTC 1 cut(s) 470
PflMI CCANNNNNTGG 1 cut(s) 202
PkrI GCNGC 9 cut(s) 18, 27, 58, 201, 284, 348, 357, 373, 451
PleI GAGTC 2 cut(s) 431, 503
PpsI GAGTC 2 cut(s) 431, 503
PpuMI RGGWCCY 1 cut(s) 304
Psp5II RGGWCCY 1 cut(s) 304
Psp6I CCWGG 2 cut(s) 33, 291
PspGI CCWGG 2 cut(s) 33, 291
PspN4I GGNNCC 6 cut(s) 131, 194, 257, 305, 306, 312
PspPI GGNCC 4 cut(s) 193, 289, 304, 310
PspPPI RGGWCCY 1 cut(s) 304
PspXI VCTCGAGB 1 cut(s) 341
PstNI CAGNNNCTG 1 cut(s) 202
PsuI RGATCY 2 cut(s) 70, 255
SacII CCGCGG 1 cut(s) 356
SalI GTCGAC 1 cut(s) 434
SapI GCTCTTC 1 cut(s) 201
SaqAI TTAA 1 cut(s) 516
SatI GCNGC 9 cut(s) 17, 26, 57, 200, 283, 347, 356, 372, 450
Sau3AI GATC 2 cut(s) 70, 255
Sau96I GGNCC 4 cut(s) 193, 289, 304, 310
SchI GAGTC 2 cut(s) 431, 503
ScrFI CCNGG 8 cut(s) 35, 48, 168, 293, 308, 384, 420, 421
SduI GDGCHC 3 cut(s) 48, 213, 299
SetI ASST 6 cut(s) 36, 131, 190, 221, 267, 348
SfaNI GCATC 1 cut(s) 529
Sfr274I CTCGAG 1 cut(s) 341
Sfr303I CCGCGG 1 cut(s) 356
SgrBI CCGCGG 1 cut(s) 356
SinI GGWCC 3 cut(s) 193, 304, 310
SlaI CTCGAG 1 cut(s) 341
SmaI CCCGGG 1 cut(s) 421
SmlI CTYRAG 2 cut(s) 341, 515
SmoI CTYRAG 2 cut(s) 341, 515
Sse9I AATT 1 cut(s) 470
SspI AATATT 1 cut(s) 92
SspMI CTAG 4 cut(s) 554, 584, 642, 694
StyD4I CCNGG 8 cut(s) 33, 46, 166, 291, 306, 382, 418, 419
StyI CCWWGG 5 cut(s) 548, 610, 632, 667, 688
TaaI ACNGT 2 cut(s) 433, 446
TaiI ACGT 1 cut(s) 221
TaqI TCGA 3 cut(s) 342, 435, 440
TasI AATT 1 cut(s) 470
TauI GCSGC 5 cut(s) 19, 59, 202, 358, 374
Tru1I TTAA 1 cut(s) 516
Tru9I TTAA 1 cut(s) 516
TseI GCWGC 4 cut(s) 25, 282, 346, 449
TspGWI ACGGA 2 cut(s) 248, 404
TspMI CCCGGG 1 cut(s) 419
Van91I CCANNNNNTGG 1 cut(s) 202
Vha464I CTTAAG 1 cut(s) 515
VpaK11BI GGWCC 3 cut(s) 193, 304, 310
XagI CCTNNNNNAGG 1 cut(s) 587
XapI RAATTY 1 cut(s) 470
XhoI CTCGAG 1 cut(s) 341
XmaI CCCGGG 1 cut(s) 419
XmiI GTMKAC 1 cut(s) 435
XmnI GAANNNNTTC 1 cut(s) 470
XspI CTAG 4 cut(s) 554, 584, 642, 694
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.