Rroxscaffold_106G00451430

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000106
OG0000104
Physical Location & Seq
Reverse (-)
2157 .. 2963
807 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_106G00451430.1

Sequence Viewer

Length: 564 bp
ATGGCGCTTAAGCGCGTGACCTATACCGGCCGTCGGGGCAAGTGCCGAGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACACAGGGCGTGAGCCGGCGGAGCGGCCGTCGGTGCGGATCTTGGTGCCTGCCCACCACGGAAACGGCTCGGCGGAGGTAGGGTCCGGCGGCGGAAGAGCACCGCACGTCGCGTGGTGTCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCGGTCTCCAAGGTGAACGACCTGCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGGCTGGGCACGGGGGTCCCGATCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCGCGGCGAGAGCGGGTCGCCGCGTGCGGCCGGGGGACGGACGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACGGTCGACTCGGGCTGGTACGGACAAGGGGAATCCGATTGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

187

Amino Acids

20.06

Weight (kDa)

11.64

Isoelectric Point (pI)

48.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 306
AccB1I GGYRCC 1 cut(s) 130
AccBSI CCGCTC 2 cut(s) 109, 450
AccI GTMKAC 1 cut(s) 520
AccII CGCG 5 cut(s) 15, 70, 197, 441, 460
AccIII TCCGGA 1 cut(s) 232
AclWI GGATC 4 cut(s) 131, 337, 350, 391
AcoI YGGCCR 3 cut(s) 28, 110, 465
AfaI GTAC 2 cut(s) 264, 534
AfiI CCNNNNNNNGG 2 cut(s) 33, 474
AflII CTTAAG 1 cut(s) 8
AgsI TTSAA 2 cut(s) 227, 514
AhdI GACNNNNNGTC 1 cut(s) 301
AjiI CACGTC 1 cut(s) 193
AluBI AGCT 1 cut(s) 433
AluI AGCT 1 cut(s) 433
Alw21I GWGCWC 1 cut(s) 187
Alw26I GTCTC 1 cut(s) 286
AlwI GGATC 4 cut(s) 131, 337, 350, 391
Ama87I CYCGRG 4 cut(s) 353, 428, 504, 524
Aor13HI TCCGGA 1 cut(s) 232
AoxI GGCC 4 cut(s) 28, 110, 219, 465
ApeKI GCWGC 3 cut(s) 79, 369, 433
AspLEI GCGC 4 cut(s) 7, 15, 70, 212
AspS9I GGNCC 4 cut(s) 168, 220, 238, 391
AsuC2I CCSGG 4 cut(s) 215, 469, 505, 506
AsuHPI GGTGA 2 cut(s) 301, 431
AvaI CYCGRG 4 cut(s) 353, 428, 504, 524
AvaII GGWCC 3 cut(s) 168, 238, 391
BaeGI GKGCMC 1 cut(s) 386
BamHI GGATCC 1 cut(s) 342
BanI GGYRCC 1 cut(s) 130
BanII GRGCYC 1 cut(s) 52
Bbv12I GWGCWC 1 cut(s) 187
BbvI GCAGC 3 cut(s) 66, 356, 420
BceAI ACGGC 3 cut(s) 15, 97, 166
BcnI CCSGG 4 cut(s) 215, 469, 505, 506
BcoDI GTCTC 1 cut(s) 286
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 8
BfuAI ACCTGC 1 cut(s) 306
BglI GCCNNNNNGGC 2 cut(s) 36, 218
Bme1390I CCNGG 4 cut(s) 215, 469, 505, 506
Bme18I GGWCC 3 cut(s) 168, 238, 391
BmeRI GACNNNNNGTC 1 cut(s) 301
BmeT110I CYCGRG 4 cut(s) 353, 428, 504, 524
BmgBI CACGTC 1 cut(s) 193
BmgT120I GGNCC 4 cut(s) 168, 220, 238, 391
BmiI GGNNCC 5 cut(s) 132, 169, 344, 392, 393
BmrFI CCNGG 4 cut(s) 215, 469, 505, 506
BmsI GCATC 1 cut(s) 284
BpuMI CCSGG 4 cut(s) 215, 469, 505, 506
BsaI GGTCTC 1 cut(s) 286
BsaJI CCNNGG 6 cut(s) 142, 213, 285, 352, 468, 504
BsaWI WCCGGW 1 cut(s) 232
BsaXI ACNNNNNCTCC 4 cut(s) 98, 128, 152, 182
Bsc4I CCNNNNNNNGG 2 cut(s) 33, 474
Bse118I RCCGGY 3 cut(s) 26, 100, 256
BseAI TCCGGA 1 cut(s) 232
BseDI CCNNGG 6 cut(s) 142, 213, 285, 352, 468, 504
BseLI CCNNNNNNNGG 2 cut(s) 33, 474
BseSI GKGCMC 1 cut(s) 386
BseX3I CGGCCG 3 cut(s) 28, 110, 465
BseXI GCAGC 3 cut(s) 66, 356, 420
BseYI CCCAGC 1 cut(s) 379
Bsh1236I CGCG 5 cut(s) 15, 70, 197, 441, 460
Bsh1285I CGRYCG 6 cut(s) 31, 77, 113, 261, 468, 520
BshFI GGCC 4 cut(s) 30, 112, 221, 467
BshNI GGYRCC 1 cut(s) 130
BsiEI CGRYCG 6 cut(s) 31, 77, 113, 261, 468, 520
BsiHKAI GWGCWC 1 cut(s) 187
BsiHKCI CYCGRG 4 cut(s) 353, 428, 504, 524
BsiSI CCGG 8 cut(s) 27, 101, 171, 215, 233, 257, 468, 505
BslFI GGGAC 2 cut(s) 377, 486
BslI CCNNNNNNNGG 2 cut(s) 33, 474
BsmAI GTCTC 1 cut(s) 286
BsmFI GGGAC 2 cut(s) 377, 486
BsnI GGCC 4 cut(s) 30, 112, 221, 467
Bso31I GGTCTC 1 cut(s) 286
BsoBI CYCGRG 4 cut(s) 353, 428, 504, 524
Bsp1286I GDGCHC 3 cut(s) 52, 187, 386
Bsp13I TCCGGA 1 cut(s) 232
Bsp143I GATC 3 cut(s) 123, 342, 396
BspANI GGCC 4 cut(s) 30, 112, 221, 467
BspEI TCCGGA 1 cut(s) 232
BspFNI CGCG 5 cut(s) 15, 70, 197, 441, 460
BspLI GGNNCC 5 cut(s) 132, 169, 344, 392, 393
BspMI ACCTGC 1 cut(s) 306
BspPI GGATC 4 cut(s) 131, 337, 350, 391
BspQI GCTCTTC 1 cut(s) 175
BspT107I GGYRCC 1 cut(s) 130
BspTI CTTAAG 1 cut(s) 8
BspTNI GGTCTC 1 cut(s) 286
BsrBI CCGCTC 2 cut(s) 109, 450
BsrFI RCCGGY 3 cut(s) 26, 100, 256
BssAI RCCGGY 3 cut(s) 26, 100, 256
BssECI CCNNGG 6 cut(s) 142, 213, 285, 352, 468, 504
BssMI GATC 3 cut(s) 123, 342, 396
BssT1I CCWWGG 1 cut(s) 285
Bst4CI ACNGT 1 cut(s) 518
Bst6I CTCTTC 1 cut(s) 175
BstAFI CTTAAG 1 cut(s) 8
BstC8I GCNNGC 3 cut(s) 102, 135, 462
BstDSI CCRYGG 1 cut(s) 142
BstFNI CGCG 5 cut(s) 15, 70, 197, 441, 460
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 4 cut(s) 7, 15, 70, 212
BstKTI GATC 3 cut(s) 126, 345, 399
BstMAI GTCTC 1 cut(s) 286
BstMBI GATC 3 cut(s) 123, 342, 396
BstMCI CGRYCG 6 cut(s) 31, 77, 113, 261, 468, 520
BstMWI GCNNNNNNNGC 9 cut(s) 36, 76, 79, 106, 118, 218, 253, 433, 447
BstSCI CCNGG 4 cut(s) 213, 467, 503, 504
BstSLI GKGCMC 1 cut(s) 386
BstUI CGCG 5 cut(s) 15, 70, 197, 441, 460
BstV1I GCAGC 3 cut(s) 66, 356, 420
BstX2I RGATCY 2 cut(s) 123, 342
BstYI RGATCY 2 cut(s) 123, 342
BstZI CGGCCG 3 cut(s) 28, 110, 465
BsuRI GGCC 4 cut(s) 30, 112, 221, 467
BtgI CCRYGG 1 cut(s) 142
BtrI CACGTC 1 cut(s) 193
BveI ACCTGC 1 cut(s) 306
Cac8I GCNNGC 3 cut(s) 102, 135, 462
CfoI GCGC 4 cut(s) 7, 15, 70, 212
Cfr10I RCCGGY 3 cut(s) 26, 100, 256
Cfr13I GGNCC 4 cut(s) 168, 220, 238, 391
Cfr9I CCCGGG 1 cut(s) 504
Csp6I GTAC 2 cut(s) 263, 533
CviQI GTAC 2 cut(s) 263, 533
DpnI GATC 3 cut(s) 125, 344, 398
DpnII GATC 3 cut(s) 123, 342, 396
DriI GACNNNNNGTC 1 cut(s) 301
EaeI YGGCCR 3 cut(s) 28, 110, 465
EagI CGGCCG 3 cut(s) 28, 110, 465
Eam1104I CTCTTC 1 cut(s) 175
Eam1105I GACNNNNNGTC 1 cut(s) 301
EarI CTCTTC 1 cut(s) 175
EciI GGCGGA 3 cut(s) 119, 173, 192
EclXI CGGCCG 3 cut(s) 28, 110, 465
Eco130I CCWWGG 1 cut(s) 285
Eco24I GRGCYC 1 cut(s) 52
Eco31I GGTCTC 1 cut(s) 286
Eco47I GGWCC 3 cut(s) 168, 238, 391
Eco52I CGGCCG 3 cut(s) 28, 110, 465
Eco88I CYCGRG 4 cut(s) 353, 428, 504, 524
EcoO109I RGGNCCY 1 cut(s) 391
EcoT14I CCWWGG 1 cut(s) 285
EcoT38I GRGCYC 1 cut(s) 52
ErhI CCWWGG 1 cut(s) 285
FaiI YATR 2 cut(s) 24, 269
FaqI GGGAC 2 cut(s) 377, 486
FauI CCCGC 1 cut(s) 443
FblI GTMKAC 1 cut(s) 520
FriOI GRGCYC 1 cut(s) 52
GlaI GCGC 4 cut(s) 6, 14, 69, 211
GsaI CCCAGC 1 cut(s) 383
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 4 cut(s) 30, 112, 221, 467
HapII CCGG 8 cut(s) 27, 101, 171, 215, 233, 257, 468, 505
HhaI GCGC 4 cut(s) 7, 15, 70, 212
Hin6I GCGC 4 cut(s) 5, 13, 68, 210
HinP1I GCGC 4 cut(s) 5, 13, 68, 210
HincII GTYRAC 1 cut(s) 521
HindII GTYRAC 1 cut(s) 521
HinfI GANTC 2 cut(s) 522, 546
HpaII CCGG 8 cut(s) 27, 101, 171, 215, 233, 257, 468, 505
HphI GGTGA 2 cut(s) 301, 431
Hpy166II GTNNAC 3 cut(s) 292, 422, 521
Hpy188I TCNGA 1 cut(s) 551
Hpy188III TCNNGA 4 cut(s) 233, 355, 394, 400
Hpy8I GTNNAC 3 cut(s) 292, 422, 521
Hpy99I CGWCG 4 cut(s) 36, 118, 197, 412
HpyAV CCTTC 1 cut(s) 500
HpyCH4III ACNGT 1 cut(s) 518
HpyCH4IV ACGT 1 cut(s) 192
HpyCH4V TGCA 1 cut(s) 82
HpyF10VI GCNNNNNNNGC 9 cut(s) 36, 76, 79, 106, 118, 218, 253, 433, 447
HpySE526I ACGT 1 cut(s) 192
HspAI GCGC 4 cut(s) 5, 13, 68, 210
KflI GGGWCCC 1 cut(s) 391
Kpn2I TCCGGA 1 cut(s) 232
KroI GCCGGC 1 cut(s) 100
KroNI GCCGGC 1 cut(s) 102
Kzo9I GATC 3 cut(s) 123, 342, 396
LguI GCTCTTC 1 cut(s) 175
LmnI GCTCC 2 cut(s) 106, 492
Lsp1109I GCAGC 3 cut(s) 66, 356, 420
LweI GCATC 1 cut(s) 284
MaeII ACGT 1 cut(s) 192
MaeIII GTNAC 2 cut(s) 16, 347
MalI GATC 3 cut(s) 125, 344, 398
MbiI CCGCTC 2 cut(s) 109, 450
MboI GATC 3 cut(s) 123, 342, 396
MboII GAAGA 1 cut(s) 192
MflI RGATCY 2 cut(s) 123, 342
MhlI GDGCHC 3 cut(s) 52, 187, 386
MluCI AATT 1 cut(s) 559
MlyI GAGTC 1 cut(s) 516
MnlI CCTC 5 cut(s) 57, 154, 229, 362, 367
MroI TCCGGA 1 cut(s) 232
MroNI GCCGGC 1 cut(s) 100
MseI TTAA 3 cut(s) 9, 558, 562
MspCI CTTAAG 1 cut(s) 8
MspI CCGG 8 cut(s) 27, 101, 171, 215, 233, 257, 468, 505
MspR9I CCNGG 4 cut(s) 215, 469, 505, 506
MvnI CGCG 5 cut(s) 15, 70, 197, 441, 460
MwoI GCNNNNNNNGC 9 cut(s) 36, 76, 79, 106, 118, 218, 253, 433, 447
NaeI GCCGGC 1 cut(s) 102
NciI CCSGG 4 cut(s) 215, 469, 505, 506
NdeII GATC 3 cut(s) 123, 342, 396
NgoMIV GCCGGC 1 cut(s) 100
NlaIV GGNNCC 5 cut(s) 132, 169, 344, 392, 393
NmeAIII GCCGAG 2 cut(s) 71, 134
NmuCI GTSAC 1 cut(s) 16
PacI TTAATTAA 1 cut(s) 562
PaeR7I CTCGAG 1 cut(s) 428
PciSI GCTCTTC 1 cut(s) 175
PcsI WCGNNNNNNNCGW 1 cut(s) 392
PdiI GCCGGC 1 cut(s) 102
PfeI GAWTC 1 cut(s) 546
PleI GAGTC 1 cut(s) 516
PpsI GAGTC 1 cut(s) 516
PpuMI RGGWCCY 1 cut(s) 391
Psp5II RGGWCCY 1 cut(s) 391
PspFI CCCAGC 1 cut(s) 379
PspN4I GGNNCC 5 cut(s) 132, 169, 344, 392, 393
PspPI GGNCC 4 cut(s) 168, 220, 238, 391
PspPPI RGGWCCY 1 cut(s) 391
PspXI VCTCGAGB 1 cut(s) 428
PsuI RGATCY 2 cut(s) 123, 342
RsaI GTAC 2 cut(s) 264, 534
RsaNI GTAC 2 cut(s) 263, 533
SalI GTCGAC 1 cut(s) 519
SapI GCTCTTC 1 cut(s) 175
SaqAI TTAA 3 cut(s) 9, 558, 562
Sau3AI GATC 3 cut(s) 123, 342, 396
Sau96I GGNCC 4 cut(s) 168, 220, 238, 391
SchI GAGTC 1 cut(s) 516
ScrFI CCNGG 4 cut(s) 215, 469, 505, 506
SduI GDGCHC 3 cut(s) 52, 187, 386
SetI ASST 7 cut(s) 23, 165, 195, 291, 300, 354, 435
SfaNI GCATC 1 cut(s) 284
Sfr274I CTCGAG 1 cut(s) 428
SinI GGWCC 3 cut(s) 168, 238, 391
SlaI CTCGAG 1 cut(s) 428
SmaI CCCGGG 1 cut(s) 506
SmlI CTYRAG 2 cut(s) 8, 428
SmoI CTYRAG 2 cut(s) 8, 428
Sse9I AATT 1 cut(s) 559
StyD4I CCNGG 4 cut(s) 213, 467, 503, 504
StyI CCWWGG 1 cut(s) 285
TaaI ACNGT 1 cut(s) 518
TaiI ACGT 1 cut(s) 195
TaqI TCGA 2 cut(s) 429, 520
TaqII GACCGA 2 cut(s) 255, 268
TasI AATT 1 cut(s) 559
TauI GCSGC 7 cut(s) 73, 112, 177, 221, 444, 460, 467
TfiI GAWTC 1 cut(s) 546
Tru1I TTAA 3 cut(s) 9, 558, 562
Tru9I TTAA 3 cut(s) 9, 558, 562
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 3 cut(s) 79, 369, 433
Tsp45I GTSAC 1 cut(s) 16
TspGWI ACGGA 4 cut(s) 159, 335, 490, 550
TspMI CCCGGG 1 cut(s) 504
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 3 cut(s) 168, 238, 391
XhoI CTCGAG 1 cut(s) 428
XmaI CCCGGG 1 cut(s) 504
XmiI GTMKAC 1 cut(s) 520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.