Rroxscaffold_20G00445040

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000020
OG0000104
Physical Location & Seq
Forward (+)
15772 .. 16622
851 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_20G00445040.1

Sequence Viewer

Length: 681 bp
ATGGCGCTTAAGCGCGTGACCTATACCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACACAGGGCGTGAGCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGCCTGCCCACCACGGAAACGGCTCGGCCGGAGGTAGGGTCCGGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGCTGGGCACGGGGGTCCCGGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCGGGCGTTCAACGGTCGACTCGGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

226

Amino Acids

24.75

Weight (kDa)

10.63

Isoelectric Point (pI)

56.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 110, 531
AccI GTMKAC 1 cut(s) 602
AccII CGCG 5 cut(s) 15, 70, 277, 522, 541
AccIII TCCGGA 1 cut(s) 313
AclWI GGATC 2 cut(s) 418, 431
AcoI YGGCCR 4 cut(s) 28, 111, 234, 547
AfaI GTAC 2 cut(s) 345, 617
AfiI CCNNNNNNNGG 7 cut(s) 33, 175, 243, 256, 545, 552, 556
AflII CTTAAG 1 cut(s) 8
AgsI TTSAA 4 cut(s) 150, 164, 308, 596
AjiI CACGTC 1 cut(s) 273
AjnI CCWGG 1 cut(s) 45
AluBI AGCT 1 cut(s) 513
AluI AGCT 1 cut(s) 513
Alw21I GWGCWC 1 cut(s) 267
Alw26I GTCTC 1 cut(s) 368
AlwI GGATC 2 cut(s) 418, 431
Ama87I CYCGRG 2 cut(s) 434, 508
Aor13HI TCCGGA 1 cut(s) 313
AoxI GGCC 8 cut(s) 28, 48, 111, 166, 209, 234, 300, 547
ApeKI GCWGC 3 cut(s) 79, 450, 513
AspLEI GCGC 4 cut(s) 7, 15, 70, 293
AspS9I GGNCC 7 cut(s) 49, 247, 301, 319, 471, 477, 665
AsuC2I CCSGG 5 cut(s) 102, 296, 475, 551, 588
AsuHPI GGTGA 2 cut(s) 383, 511
AvaI CYCGRG 2 cut(s) 434, 508
AvaII GGWCC 5 cut(s) 247, 319, 471, 477, 665
BaeGI GKGCMC 1 cut(s) 466
BamHI GGATCC 1 cut(s) 423
Bbv12I GWGCWC 1 cut(s) 267
BbvI GCAGC 3 cut(s) 66, 437, 500
BccI CCATC 1 cut(s) 656
BceAI ACGGC 4 cut(s) 15, 98, 211, 244
BciT130I CCWGG 1 cut(s) 47
BcnI CCSGG 5 cut(s) 102, 296, 475, 551, 588
BcoDI GTCTC 1 cut(s) 368
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 8
BglI GCCNNNNNGGC 2 cut(s) 36, 299
BglII AGATCT 1 cut(s) 124
BisI GCNGC 9 cut(s) 71, 80, 111, 254, 300, 451, 514, 523, 539
BlsI GCNGC 9 cut(s) 72, 81, 112, 255, 301, 452, 515, 524, 540
Bme1390I CCNGG 6 cut(s) 47, 102, 296, 475, 551, 588
Bme18I GGWCC 5 cut(s) 247, 319, 471, 477, 665
BmeT110I CYCGRG 2 cut(s) 434, 508
BmgBI CACGTC 1 cut(s) 273
BmgT120I GGNCC 7 cut(s) 49, 247, 301, 319, 471, 477, 665
BmiI GGNNCC 8 cut(s) 51, 185, 248, 425, 472, 473, 479, 667
BmrFI CCNGG 6 cut(s) 47, 102, 296, 475, 551, 588
BmrI ACTGGG 1 cut(s) 571
BmsI GCATC 1 cut(s) 365
BmuI ACTGGG 1 cut(s) 571
BpuMI CCSGG 5 cut(s) 102, 296, 475, 551, 588
BsaI GGTCTC 1 cut(s) 368
BsaJI CCNNGG 7 cut(s) 220, 294, 367, 380, 433, 520, 550
BsaWI WCCGGW 2 cut(s) 285, 313
BsaXI ACNNNNNCTCC 4 cut(s) 99, 129, 231, 261
Bsc4I CCNNNNNNNGG 7 cut(s) 33, 175, 243, 256, 545, 552, 556
Bse118I RCCGGY 3 cut(s) 26, 337, 545
Bse1I ACTGG 2 cut(s) 566, 617
Bse3DI GCAATG 1 cut(s) 655
BseAI TCCGGA 1 cut(s) 313
BseBI CCWGG 1 cut(s) 47
BseDI CCNNGG 7 cut(s) 220, 294, 367, 380, 433, 520, 550
BseGI GGATG 1 cut(s) 680
BseLI CCNNNNNNNGG 7 cut(s) 33, 175, 243, 256, 545, 552, 556
BseMI GCAATG 1 cut(s) 655
BseNI ACTGG 2 cut(s) 566, 617
BseSI GKGCMC 1 cut(s) 466
BseX3I CGGCCG 4 cut(s) 28, 111, 234, 547
BseXI GCAGC 3 cut(s) 66, 437, 500
BseYI CCCAGC 1 cut(s) 459
BsgI GTGCAG 1 cut(s) 141
Bsh1236I CGCG 5 cut(s) 15, 70, 277, 522, 541
Bsh1285I CGRYCG 7 cut(s) 31, 77, 114, 237, 342, 550, 602
BshFI GGCC 8 cut(s) 30, 50, 113, 168, 211, 236, 302, 549
BsiEI CGRYCG 7 cut(s) 31, 77, 114, 237, 342, 550, 602
BsiHKAI GWGCWC 1 cut(s) 267
BsiHKCI CYCGRG 2 cut(s) 434, 508
BslFI GGGAC 4 cut(s) 457, 463, 568, 651
BslI CCNNNNNNNGG 7 cut(s) 33, 175, 243, 256, 545, 552, 556
BsmAI GTCTC 1 cut(s) 368
BsmFI GGGAC 4 cut(s) 457, 463, 568, 651
BsnI GGCC 8 cut(s) 30, 50, 113, 168, 211, 236, 302, 549
Bso31I GGTCTC 1 cut(s) 368
BsoBI CYCGRG 2 cut(s) 434, 508
Bsp1286I GDGCHC 2 cut(s) 267, 466
Bsp13I TCCGGA 1 cut(s) 313
Bsp143I GATC 2 cut(s) 124, 423
BspANI GGCC 8 cut(s) 30, 50, 113, 168, 211, 236, 302, 549
BspEI TCCGGA 1 cut(s) 313
BspFNI CGCG 5 cut(s) 15, 70, 277, 522, 541
BspLI GGNNCC 8 cut(s) 51, 185, 248, 425, 472, 473, 479, 667
BspPI GGATC 2 cut(s) 418, 431
BspQI GCTCTTC 1 cut(s) 255
BspTI CTTAAG 1 cut(s) 8
BspTNI GGTCTC 1 cut(s) 368
BsrBI CCGCTC 2 cut(s) 110, 531
BsrDI GCAATG 1 cut(s) 655
BsrFI RCCGGY 3 cut(s) 26, 337, 545
BsrI ACTGG 2 cut(s) 566, 617
BssAI RCCGGY 3 cut(s) 26, 337, 545
BssECI CCNNGG 7 cut(s) 220, 294, 367, 380, 433, 520, 550
BssMI GATC 2 cut(s) 124, 423
BssT1I CCWWGG 1 cut(s) 367
Bst2UI CCWGG 1 cut(s) 47
Bst4CI ACNGT 2 cut(s) 600, 638
Bst6I CTCTTC 2 cut(s) 166, 255
BstAFI CTTAAG 1 cut(s) 8
BstC8I GCNNGC 3 cut(s) 213, 543, 547
BstDSI CCRYGG 2 cut(s) 220, 520
BstF5I GGATG 1 cut(s) 680
BstFNI CGCG 5 cut(s) 15, 70, 277, 522, 541
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 4 cut(s) 7, 15, 70, 293
BstKTI GATC 2 cut(s) 127, 426
BstMAI GTCTC 1 cut(s) 368
BstMBI GATC 2 cut(s) 124, 423
BstMCI CGRYCG 7 cut(s) 31, 77, 114, 237, 342, 550, 602
BstNI CCWGG 1 cut(s) 47
BstSCI CCNGG 6 cut(s) 45, 100, 294, 473, 549, 586
BstSLI GKGCMC 1 cut(s) 466
BstUI CGCG 5 cut(s) 15, 70, 277, 522, 541
BstV1I GCAGC 3 cut(s) 66, 437, 500
BstX2I RGATCY 2 cut(s) 124, 423
BstYI RGATCY 2 cut(s) 124, 423
BstZI CGGCCG 4 cut(s) 28, 111, 234, 547
BsuRI GGCC 8 cut(s) 30, 50, 113, 168, 211, 236, 302, 549
BtgI CCRYGG 2 cut(s) 220, 520
BtgZI GCGATG 1 cut(s) 675
BtrI CACGTC 1 cut(s) 273
BtsCI GGATG 1 cut(s) 680
Cac8I GCNNGC 3 cut(s) 213, 543, 547
CfoI GCGC 4 cut(s) 7, 15, 70, 293
Cfr10I RCCGGY 3 cut(s) 26, 337, 545
Cfr13I GGNCC 7 cut(s) 49, 247, 301, 319, 471, 477, 665
Cfr42I CCGCGG 1 cut(s) 523
Csp6I GTAC 2 cut(s) 344, 616
CviAII CATG 2 cut(s) 188, 207
CviQI GTAC 2 cut(s) 344, 616
DpnI GATC 2 cut(s) 126, 425
DpnII GATC 2 cut(s) 124, 423
EaeI YGGCCR 4 cut(s) 28, 111, 234, 547
EagI CGGCCG 4 cut(s) 28, 111, 234, 547
Eam1104I CTCTTC 2 cut(s) 166, 255
EarI CTCTTC 2 cut(s) 166, 255
EciI GGCGGA 1 cut(s) 120
EclXI CGGCCG 4 cut(s) 28, 111, 234, 547
Eco130I CCWWGG 1 cut(s) 367
Eco31I GGTCTC 1 cut(s) 368
Eco47I GGWCC 5 cut(s) 247, 319, 471, 477, 665
Eco52I CGGCCG 4 cut(s) 28, 111, 234, 547
Eco88I CYCGRG 2 cut(s) 434, 508
EcoO109I RGGNCCY 2 cut(s) 49, 471
EcoRII CCWGG 1 cut(s) 45
EcoT14I CCWWGG 1 cut(s) 367
ErhI CCWWGG 1 cut(s) 367
FaeI CATG 2 cut(s) 191, 210
FaiI YATR 4 cut(s) 24, 189, 208, 350
FaqI GGGAC 4 cut(s) 457, 463, 568, 651
FatI CATG 2 cut(s) 187, 206
FauI CCCGC 1 cut(s) 524
FblI GTMKAC 1 cut(s) 602
Fnu4HI GCNGC 9 cut(s) 71, 80, 111, 254, 300, 451, 514, 523, 539
Fsp4HI GCNGC 9 cut(s) 71, 80, 111, 254, 300, 451, 514, 523, 539
GlaI GCGC 4 cut(s) 6, 14, 69, 292
GluI GCNGC 9 cut(s) 71, 80, 111, 254, 300, 451, 514, 523, 539
GsaI CCCAGC 1 cut(s) 463
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 8 cut(s) 30, 50, 113, 168, 211, 236, 302, 549
HhaI GCGC 4 cut(s) 7, 15, 70, 293
Hin1II CATG 2 cut(s) 191, 210
Hin6I GCGC 4 cut(s) 5, 13, 68, 291
HinP1I GCGC 4 cut(s) 5, 13, 68, 291
HincII GTYRAC 1 cut(s) 603
HindII GTYRAC 1 cut(s) 603
HinfI GANTC 2 cut(s) 604, 629
HphI GGTGA 2 cut(s) 383, 511
Hpy166II GTNNAC 4 cut(s) 193, 374, 502, 603
Hpy188I TCNGA 2 cut(s) 609, 634
Hpy188III TCNNGA 3 cut(s) 314, 436, 480
Hpy8I GTNNAC 4 cut(s) 193, 374, 502, 603
Hpy99I CGWCG 4 cut(s) 36, 119, 277, 492
HpyAV CCTTC 2 cut(s) 158, 583
HpyCH4III ACNGT 2 cut(s) 600, 638
HpyCH4IV ACGT 1 cut(s) 272
HpyCH4V TGCA 3 cut(s) 82, 122, 204
HpySE526I ACGT 1 cut(s) 272
Hsp92II CATG 2 cut(s) 191, 210
HspAI GCGC 4 cut(s) 5, 13, 68, 291
KflI GGGWCCC 1 cut(s) 471
Kpn2I TCCGGA 1 cut(s) 313
KroI GCCGGC 1 cut(s) 545
KroNI GCCGGC 1 cut(s) 547
KspI CCGCGG 1 cut(s) 523
Kzo9I GATC 2 cut(s) 124, 423
LguI GCTCTTC 1 cut(s) 255
LmnI GCTCC 2 cut(s) 107, 575
Lsp1109I GCAGC 3 cut(s) 66, 437, 500
LweI GCATC 1 cut(s) 365
MaeII ACGT 1 cut(s) 272
MaeIII GTNAC 2 cut(s) 16, 428
MalI GATC 2 cut(s) 126, 425
MbiI CCGCTC 2 cut(s) 110, 531
MboI GATC 2 cut(s) 124, 423
MboII GAAGA 2 cut(s) 183, 272
MflI RGATCY 2 cut(s) 124, 423
MhlI GDGCHC 2 cut(s) 267, 466
MluCI AATT 1 cut(s) 642
MlyI GAGTC 1 cut(s) 598
MmeI TCCRAC 1 cut(s) 657
MnlI CCTC 7 cut(s) 57, 167, 233, 310, 390, 443, 448
MroI TCCGGA 1 cut(s) 313
MroNI GCCGGC 1 cut(s) 545
MseI TTAA 4 cut(s) 9, 641, 645, 679
MslI CAYNNNNRTG 1 cut(s) 660
MspA1I CMGCKG 1 cut(s) 522
MspCI CTTAAG 1 cut(s) 8
MspR9I CCNGG 6 cut(s) 47, 102, 296, 475, 551, 588
MvaI CCWGG 1 cut(s) 47
MvnI CGCG 5 cut(s) 15, 70, 277, 522, 541
NaeI GCCGGC 1 cut(s) 547
NciI CCSGG 5 cut(s) 102, 296, 475, 551, 588
NdeII GATC 2 cut(s) 124, 423
NgoMIV GCCGGC 1 cut(s) 545
NlaIII CATG 2 cut(s) 191, 210
NlaIV GGNNCC 8 cut(s) 51, 185, 248, 425, 472, 473, 479, 667
NmeAIII GCCGAG 1 cut(s) 212
NmuCI GTSAC 1 cut(s) 16
PacI TTAATTAA 1 cut(s) 645
PaeR7I CTCGAG 1 cut(s) 508
PciSI GCTCTTC 1 cut(s) 255
PdiI GCCGGC 1 cut(s) 547
PfeI GAWTC 1 cut(s) 629
PkrI GCNGC 9 cut(s) 72, 81, 112, 255, 301, 452, 515, 524, 540
PleI GAGTC 1 cut(s) 598
PpsI GAGTC 1 cut(s) 598
PpuMI RGGWCCY 1 cut(s) 471
Psp5II RGGWCCY 1 cut(s) 471
Psp6I CCWGG 1 cut(s) 45
PspFI CCCAGC 1 cut(s) 459
PspGI CCWGG 1 cut(s) 45
PspN4I GGNNCC 8 cut(s) 51, 185, 248, 425, 472, 473, 479, 667
PspPI GGNCC 7 cut(s) 49, 247, 301, 319, 471, 477, 665
PspPPI RGGWCCY 1 cut(s) 471
PspXI VCTCGAGB 1 cut(s) 508
PsuI RGATCY 2 cut(s) 124, 423
RsaI GTAC 2 cut(s) 345, 617
RsaNI GTAC 2 cut(s) 344, 616
RseI CAYNNNNRTG 1 cut(s) 660
SacII CCGCGG 1 cut(s) 523
SalI GTCGAC 1 cut(s) 601
SapI GCTCTTC 1 cut(s) 255
SaqAI TTAA 4 cut(s) 9, 641, 645, 679
SatI GCNGC 9 cut(s) 71, 80, 111, 254, 300, 451, 514, 523, 539
Sau3AI GATC 2 cut(s) 124, 423
Sau96I GGNCC 7 cut(s) 49, 247, 301, 319, 471, 477, 665
SchI GAGTC 1 cut(s) 598
ScrFI CCNGG 6 cut(s) 47, 102, 296, 475, 551, 588
SduI GDGCHC 2 cut(s) 267, 466
SetI ASST 8 cut(s) 23, 185, 244, 275, 364, 373, 435, 515
SfaNI GCATC 1 cut(s) 365
Sfr274I CTCGAG 1 cut(s) 508
Sfr303I CCGCGG 1 cut(s) 523
SgrBI CCGCGG 1 cut(s) 523
SinI GGWCC 5 cut(s) 247, 319, 471, 477, 665
SlaI CTCGAG 1 cut(s) 508
SmiMI CAYNNNNRTG 1 cut(s) 660
SmlI CTYRAG 2 cut(s) 8, 508
SmoI CTYRAG 2 cut(s) 8, 508
Sse9I AATT 1 cut(s) 642
SspI AATATT 1 cut(s) 146
StyD4I CCNGG 6 cut(s) 45, 100, 294, 473, 549, 586
StyI CCWWGG 1 cut(s) 367
TaaI ACNGT 2 cut(s) 600, 638
TaiI ACGT 1 cut(s) 275
TaqI TCGA 2 cut(s) 509, 602
TaqII GACCGA 2 cut(s) 336, 372
TasI AATT 1 cut(s) 642
TauI GCSGC 6 cut(s) 73, 113, 256, 302, 525, 541
TfiI GAWTC 1 cut(s) 629
Tru1I TTAA 4 cut(s) 9, 641, 645, 679
Tru9I TTAA 4 cut(s) 9, 641, 645, 679
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 3 cut(s) 79, 450, 513
Tsp45I GTSAC 1 cut(s) 16
TspGWI ACGGA 4 cut(s) 237, 416, 572, 633
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 5 cut(s) 247, 319, 471, 477, 665
XhoI CTCGAG 1 cut(s) 508
XmiI GTMKAC 1 cut(s) 602
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.