Rroxscaffold_6G00387830

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0000104
Physical Location & Seq
Forward (+)
69162 .. 70735
1574 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00387830.1

Sequence Viewer

Length: 567 bp
ATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCTGGTAACGGCCTGCGGGCTCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCCGACATGTGTGCGAGTCAACGGCCTGCCCACCCCGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCTGGGCACGGGGGTCCCGGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACCGGGAACGCTCCTTCGGGGGCTTTCCCGGCGTTCAACGGTCGACTCGAATCTGGTACGGACAAGGGGAATCCGACCGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

188

Amino Acids

19.99

Weight (kDa)

12.0

Isoelectric Point (pI)

62.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 102
AccBSI CCGCTC 1 cut(s) 451
AccI GTMKAC 1 cut(s) 522
AccII CGCG 3 cut(s) 195, 442, 461
AccIII TCCGGA 1 cut(s) 231
AciI CCGC 9 cut(s) 64, 171, 186, 217, 273, 440, 442, 451, 459
AclWI GGATC 2 cut(s) 339, 352
AcoI YGGCCR 2 cut(s) 172, 467
AfaI GTAC 2 cut(s) 264, 537
AfiI CCNNNNNNNGG 7 cut(s) 56, 145, 161, 174, 465, 472, 476
AflIII ACRYGT 1 cut(s) 110
AgsI TTSAA 3 cut(s) 88, 226, 516
AjiI CACGTC 1 cut(s) 191
AjnI CCWGG 1 cut(s) 49
AluBI AGCT 1 cut(s) 433
AluI AGCT 1 cut(s) 433
Alw21I GWGCWC 2 cut(s) 49, 185
Alw26I GTCTC 2 cut(s) 26, 287
AlwI GGATC 2 cut(s) 339, 352
Ama87I CYCGRG 3 cut(s) 355, 372, 428
Aor13HI TCCGGA 1 cut(s) 231
AoxI GGCC 6 cut(s) 58, 77, 127, 172, 218, 467
ApeKI GCWGC 2 cut(s) 9, 433
AspLEI GCGC 2 cut(s) 18, 211
AspS9I GGNCC 8 cut(s) 78, 95, 165, 219, 237, 391, 397, 479
AsuC2I CCSGG 7 cut(s) 140, 214, 257, 395, 471, 483, 508
AsuHPI GGTGA 2 cut(s) 302, 431
AvaI CYCGRG 3 cut(s) 355, 372, 428
AvaII GGWCC 6 cut(s) 95, 165, 237, 391, 397, 479
BaeGI GKGCMC 1 cut(s) 386
BamHI GGATCC 1 cut(s) 344
BanII GRGCYC 1 cut(s) 70
Bbv12I GWGCWC 2 cut(s) 49, 185
BbvI GCAGC 2 cut(s) 21, 420
BceAI ACGGC 4 cut(s) 3, 73, 142, 162
BcgI CGANNNNNNTGC 2 cut(s) 97, 131
BciT130I CCWGG 1 cut(s) 51
BcnI CCSGG 7 cut(s) 140, 214, 257, 395, 471, 483, 508
BcoDI GTCTC 2 cut(s) 26, 287
BglI GCCNNNNNGGC 2 cut(s) 24, 217
BisI GCNGC 6 cut(s) 10, 172, 218, 434, 443, 459
BlpI GCTNAGC 1 cut(s) 150
BlsI GCNGC 6 cut(s) 11, 173, 219, 435, 444, 460
Bme1390I CCNGG 8 cut(s) 51, 140, 214, 257, 395, 471, 483, 508
Bme18I GGWCC 6 cut(s) 95, 165, 237, 391, 397, 479
BmeT110I CYCGRG 3 cut(s) 355, 372, 428
BmgBI CACGTC 1 cut(s) 191
BmgT120I GGNCC 8 cut(s) 78, 95, 165, 219, 237, 391, 397, 479
BmiI GGNNCC 6 cut(s) 69, 166, 346, 392, 393, 399
BmrFI CCNGG 8 cut(s) 51, 140, 214, 257, 395, 471, 483, 508
BmsI GCATC 2 cut(s) 46, 284
Bpu1102I GCTNAGC 1 cut(s) 150
BpuMI CCSGG 7 cut(s) 140, 214, 257, 395, 471, 483, 508
BsaI GGTCTC 1 cut(s) 287
BsaJI CCNNGG 7 cut(s) 98, 138, 212, 286, 354, 440, 470
BsaWI WCCGGW 2 cut(s) 203, 231
BsaXI ACNNNNNCTCC 2 cut(s) 149, 179
Bsc4I CCNNNNNNNGG 7 cut(s) 56, 145, 161, 174, 465, 472, 476
Bse118I RCCGGY 1 cut(s) 465
BseAI TCCGGA 1 cut(s) 231
BseBI CCWGG 1 cut(s) 51
BseDI CCNNGG 7 cut(s) 98, 138, 212, 286, 354, 440, 470
BseLI CCNNNNNNNGG 7 cut(s) 56, 145, 161, 174, 465, 472, 476
BseMII CTCAG 1 cut(s) 164
BseSI GKGCMC 1 cut(s) 386
BseX3I CGGCCG 2 cut(s) 172, 467
BseXI GCAGC 2 cut(s) 21, 420
BseYI CCCAGC 1 cut(s) 379
Bsh1236I CGCG 3 cut(s) 195, 442, 461
Bsh1285I CGRYCG 5 cut(s) 175, 261, 470, 522, 557
BshFI GGCC 6 cut(s) 60, 79, 129, 174, 220, 469
BsiEI CGRYCG 5 cut(s) 175, 261, 470, 522, 557
BsiHKAI GWGCWC 2 cut(s) 49, 185
BsiHKCI CYCGRG 3 cut(s) 355, 372, 428
BslFI GGGAC 3 cut(s) 377, 383, 488
BslI CCNNNNNNNGG 7 cut(s) 56, 145, 161, 174, 465, 472, 476
BsmAI GTCTC 2 cut(s) 26, 287
BsmBI CGTCTC 1 cut(s) 26
BsmFI GGGAC 3 cut(s) 377, 383, 488
BsnI GGCC 6 cut(s) 60, 79, 129, 174, 220, 469
Bso31I GGTCTC 1 cut(s) 287
BsoBI CYCGRG 3 cut(s) 355, 372, 428
Bsp1286I GDGCHC 4 cut(s) 49, 70, 185, 386
Bsp13I TCCGGA 1 cut(s) 231
Bsp143I GATC 1 cut(s) 344
Bsp1720I GCTNAGC 1 cut(s) 150
BspACI CCGC 9 cut(s) 64, 171, 186, 217, 273, 440, 442, 451, 459
BspANI GGCC 6 cut(s) 60, 79, 129, 174, 220, 469
BspCNI CTCAG 1 cut(s) 163
BspEI TCCGGA 1 cut(s) 231
BspFNI CGCG 3 cut(s) 195, 442, 461
BspLI GGNNCC 6 cut(s) 69, 166, 346, 392, 393, 399
BspPI GGATC 2 cut(s) 339, 352
BspQI GCTCTTC 1 cut(s) 173
BspTNI GGTCTC 1 cut(s) 287
BsrBI CCGCTC 1 cut(s) 451
BsrFI RCCGGY 1 cut(s) 465
BssAI RCCGGY 1 cut(s) 465
BssECI CCNNGG 7 cut(s) 98, 138, 212, 286, 354, 440, 470
BssMI GATC 1 cut(s) 344
BssT1I CCWWGG 2 cut(s) 98, 286
Bst2UI CCWGG 1 cut(s) 51
Bst4CI ACNGT 2 cut(s) 520, 558
Bst6I CTCTTC 1 cut(s) 173
BstC8I GCNNGC 8 cut(s) 14, 29, 45, 62, 66, 131, 463, 467
BstDEI CTNAG 1 cut(s) 150
BstDSI CCRYGG 1 cut(s) 440
BstFNI CGCG 3 cut(s) 195, 442, 461
BstHHI GCGC 2 cut(s) 18, 211
BstKTI GATC 1 cut(s) 347
BstMAI GTCTC 2 cut(s) 26, 287
BstMBI GATC 1 cut(s) 344
BstMCI CGRYCG 5 cut(s) 175, 261, 470, 522, 557
BstNI CCWGG 1 cut(s) 51
BstNSI RCATGY 2 cut(s) 16, 114
BstSCI CCNGG 8 cut(s) 49, 138, 212, 255, 393, 469, 481, 506
BstSLI GKGCMC 1 cut(s) 386
BstUI CGCG 3 cut(s) 195, 442, 461
BstV1I GCAGC 2 cut(s) 21, 420
BstX2I RGATCY 1 cut(s) 344
BstYI RGATCY 1 cut(s) 344
BstZI CGGCCG 2 cut(s) 172, 467
BsuRI GGCC 6 cut(s) 60, 79, 129, 174, 220, 469
BtgI CCRYGG 1 cut(s) 440
BtrI CACGTC 1 cut(s) 191
Cac8I GCNNGC 8 cut(s) 14, 29, 45, 62, 66, 131, 463, 467
CfoI GCGC 2 cut(s) 18, 211
Cfr10I RCCGGY 1 cut(s) 465
Cfr13I GGNCC 8 cut(s) 78, 95, 165, 219, 237, 391, 397, 479
Cfr42I CCGCGG 1 cut(s) 443
CpoI CGGWCCG 1 cut(s) 479
Csp6I GTAC 2 cut(s) 263, 536
CspI CGGWCCG 1 cut(s) 479
CviAII CATG 2 cut(s) 13, 111
CviQI GTAC 2 cut(s) 263, 536
DdeI CTNAG 1 cut(s) 150
DpnI GATC 1 cut(s) 346
DpnII GATC 1 cut(s) 344
DrdI GACNNNNNNGTC 1 cut(s) 102
DseDI GACNNNNNNGTC 1 cut(s) 102
EaeI YGGCCR 2 cut(s) 172, 467
EagI CGGCCG 2 cut(s) 172, 467
Eam1104I CTCTTC 1 cut(s) 173
EarI CTCTTC 1 cut(s) 173
EclXI CGGCCG 2 cut(s) 172, 467
Eco130I CCWWGG 2 cut(s) 98, 286
Eco24I GRGCYC 1 cut(s) 70
Eco31I GGTCTC 1 cut(s) 287
Eco47I GGWCC 6 cut(s) 95, 165, 237, 391, 397, 479
Eco52I CGGCCG 2 cut(s) 172, 467
Eco88I CYCGRG 3 cut(s) 355, 372, 428
EcoO109I RGGNCCY 1 cut(s) 391
EcoRII CCWGG 1 cut(s) 49
EcoT14I CCWWGG 2 cut(s) 98, 286
EcoT38I GRGCYC 1 cut(s) 70
ErhI CCWWGG 2 cut(s) 98, 286
Esp3I CGTCTC 1 cut(s) 26
FaeI CATG 2 cut(s) 16, 114
FaiI YATR 3 cut(s) 14, 112, 269
FaqI GGGAC 3 cut(s) 377, 383, 488
FatI CATG 2 cut(s) 12, 110
FauI CCCGC 2 cut(s) 57, 444
FblI GTMKAC 1 cut(s) 522
Fnu4HI GCNGC 6 cut(s) 10, 172, 218, 434, 443, 459
FriOI GRGCYC 1 cut(s) 70
Fsp4HI GCNGC 6 cut(s) 10, 172, 218, 434, 443, 459
GlaI GCGC 2 cut(s) 17, 210
GluI GCNGC 6 cut(s) 10, 172, 218, 434, 443, 459
GsaI CCCAGC 1 cut(s) 383
HaeIII GGCC 6 cut(s) 60, 79, 129, 174, 220, 469
HhaI GCGC 2 cut(s) 18, 211
Hin1II CATG 2 cut(s) 16, 114
Hin6I GCGC 2 cut(s) 16, 209
HinP1I GCGC 2 cut(s) 16, 209
HincII GTYRAC 2 cut(s) 124, 523
HindII GTYRAC 2 cut(s) 124, 523
HinfI GANTC 5 cut(s) 103, 120, 524, 529, 549
HphI GGTGA 2 cut(s) 302, 431
Hpy166II GTNNAC 4 cut(s) 124, 293, 422, 523
Hpy188I TCNGA 2 cut(s) 108, 554
Hpy188III TCNNGA 4 cut(s) 85, 232, 357, 400
Hpy8I GTNNAC 4 cut(s) 124, 293, 422, 523
Hpy99I CGWCG 2 cut(s) 195, 412
HpyAV CCTTC 1 cut(s) 503
HpyCH4III ACNGT 2 cut(s) 520, 558
HpyCH4IV ACGT 1 cut(s) 190
HpyF3I CTNAG 1 cut(s) 150
HpySE526I ACGT 1 cut(s) 190
Hsp92II CATG 2 cut(s) 16, 114
HspAI GCGC 2 cut(s) 16, 209
KflI GGGWCCC 1 cut(s) 391
Kpn2I TCCGGA 1 cut(s) 231
KroI GCCGGC 1 cut(s) 465
KroNI GCCGGC 1 cut(s) 467
KspI CCGCGG 1 cut(s) 443
Kzo9I GATC 1 cut(s) 344
LguI GCTCTTC 1 cut(s) 173
LmnI GCTCC 3 cut(s) 52, 73, 495
Lsp1109I GCAGC 2 cut(s) 21, 420
LweI GCATC 2 cut(s) 46, 284
MaeII ACGT 1 cut(s) 190
MaeIII GTNAC 2 cut(s) 53, 349
MalI GATC 1 cut(s) 346
MbiI CCGCTC 1 cut(s) 451
MboI GATC 1 cut(s) 344
MboII GAAGA 1 cut(s) 190
MflI RGATCY 1 cut(s) 344
MhlI GDGCHC 4 cut(s) 49, 70, 185, 386
MluCI AATT 1 cut(s) 562
MlyI GAGTC 3 cut(s) 112, 129, 518
MmeI TCCRAC 1 cut(s) 131
MnlI CCTC 5 cut(s) 151, 228, 309, 364, 368
MroI TCCGGA 1 cut(s) 231
MroNI GCCGGC 1 cut(s) 465
MseI TTAA 2 cut(s) 561, 565
MslI CAYNNNNRTG 1 cut(s) 42
MspA1I CMGCKG 2 cut(s) 171, 442
MspR9I CCNGG 8 cut(s) 51, 140, 214, 257, 395, 471, 483, 508
MvaI CCWGG 1 cut(s) 51
MvnI CGCG 3 cut(s) 195, 442, 461
NaeI GCCGGC 1 cut(s) 467
NciI CCSGG 7 cut(s) 140, 214, 257, 395, 471, 483, 508
NdeII GATC 1 cut(s) 344
NgoMIV GCCGGC 1 cut(s) 465
NlaIII CATG 2 cut(s) 16, 114
NlaIV GGNNCC 6 cut(s) 69, 166, 346, 392, 393, 399
NspI RCATGY 2 cut(s) 16, 114
PacI TTAATTAA 1 cut(s) 565
PaeI GCATGC 1 cut(s) 16
PaeR7I CTCGAG 2 cut(s) 372, 428
PciI ACATGT 1 cut(s) 110
PciSI GCTCTTC 1 cut(s) 173
PcsI WCGNNNNNNNCGW 2 cut(s) 40, 524
PdiI GCCGGC 1 cut(s) 467
PfeI GAWTC 2 cut(s) 529, 549
PkrI GCNGC 6 cut(s) 11, 173, 219, 435, 444, 460
PleI GAGTC 3 cut(s) 111, 128, 518
PpsI GAGTC 3 cut(s) 111, 128, 518
PpuMI RGGWCCY 1 cut(s) 391
PscI ACATGT 1 cut(s) 110
Psp5II RGGWCCY 1 cut(s) 391
Psp6I CCWGG 1 cut(s) 49
PspFI CCCAGC 1 cut(s) 379
PspGI CCWGG 1 cut(s) 49
PspN4I GGNNCC 6 cut(s) 69, 166, 346, 392, 393, 399
PspPI GGNCC 8 cut(s) 78, 95, 165, 219, 237, 391, 397, 479
PspPPI RGGWCCY 1 cut(s) 391
PspXI VCTCGAGB 2 cut(s) 372, 428
PsuI RGATCY 1 cut(s) 344
RsaI GTAC 2 cut(s) 264, 537
RsaNI GTAC 2 cut(s) 263, 536
RseI CAYNNNNRTG 1 cut(s) 42
Rsr2I CGGWCCG 1 cut(s) 479
RsrII CGGWCCG 1 cut(s) 479
SacII CCGCGG 1 cut(s) 443
SalI GTCGAC 1 cut(s) 521
SapI GCTCTTC 1 cut(s) 173
SaqAI TTAA 2 cut(s) 561, 565
SatI GCNGC 6 cut(s) 10, 172, 218, 434, 443, 459
Sau3AI GATC 1 cut(s) 344
Sau96I GGNCC 8 cut(s) 78, 95, 165, 219, 237, 391, 397, 479
SchI GAGTC 3 cut(s) 112, 129, 518
ScrFI CCNGG 8 cut(s) 51, 140, 214, 257, 395, 471, 483, 508
SduI GDGCHC 4 cut(s) 49, 70, 185, 386
SetI ASST 6 cut(s) 162, 193, 283, 292, 356, 435
SfaNI GCATC 2 cut(s) 46, 284
Sfr274I CTCGAG 2 cut(s) 372, 428
Sfr303I CCGCGG 1 cut(s) 443
SgrBI CCGCGG 1 cut(s) 443
SinI GGWCC 6 cut(s) 95, 165, 237, 391, 397, 479
SlaI CTCGAG 2 cut(s) 372, 428
SmiMI CAYNNNNRTG 1 cut(s) 42
SmlI CTYRAG 2 cut(s) 372, 428
SmoI CTYRAG 2 cut(s) 372, 428
SphI GCATGC 1 cut(s) 16
Sse9I AATT 1 cut(s) 562
SsiI CCGC 9 cut(s) 64, 171, 186, 217, 273, 440, 442, 451, 459
StyD4I CCNGG 8 cut(s) 49, 138, 212, 255, 393, 469, 481, 506
StyI CCWWGG 2 cut(s) 98, 286
TaaI ACNGT 2 cut(s) 520, 558
TaiI ACGT 1 cut(s) 193
TaqI TCGA 4 cut(s) 373, 429, 522, 527
TaqII GACCGA 2 cut(s) 254, 293
TasI AATT 1 cut(s) 562
TauI GCSGC 4 cut(s) 174, 220, 445, 461
TfiI GAWTC 2 cut(s) 529, 549
Tru1I TTAA 2 cut(s) 561, 565
Tru9I TTAA 2 cut(s) 561, 565
TseI GCWGC 2 cut(s) 9, 433
TspGWI ACGGA 4 cut(s) 108, 337, 492, 553
VpaK11BI GGWCC 6 cut(s) 95, 165, 237, 391, 397, 479
XceI RCATGY 2 cut(s) 16, 114
XhoI CTCGAG 2 cut(s) 372, 428
XmiI GTMKAC 1 cut(s) 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.