Rroxscaffold_105G00447230

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000105
OG0000104
Physical Location & Seq
Reverse (-)
68560 .. 69421
862 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_105G00447230.1

Sequence Viewer

Length: 492 bp
ATGGCGCTTAAGCGCGTGACCTATACCCGGCCGTCGGGGCAAGTGCCGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCCGGGGCGTGAGCCCGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCTGGGCACGGGGGTCCCGGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGACGGACCGGGAACGCTCCTTCGGGGGCTTTCCCCGGCGTTCAACGGTCGACTCGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCTGCGGATGTTAACGCAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

163

Amino Acids

17.44

Weight (kDa)

10.2

Isoelectric Point (pI)

55.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 110, 334
AccI GTMKAC 1 cut(s) 405
AccII CGCG 4 cut(s) 15, 70, 325, 344
AciI CCGC 9 cut(s) 70, 73, 105, 110, 323, 325, 334, 342, 473
AclWI GGATC 2 cut(s) 222, 235
AcoI YGGCCR 3 cut(s) 29, 111, 350
AfaI GTAC 1 cut(s) 419
AfiI CCNNNNNNNGG 4 cut(s) 27, 34, 175, 348
AflII CTTAAG 1 cut(s) 8
AgsI TTSAA 3 cut(s) 150, 164, 399
AluBI AGCT 1 cut(s) 316
AluI AGCT 1 cut(s) 316
AlwI GGATC 2 cut(s) 222, 235
Ama87I CYCGRG 4 cut(s) 88, 238, 255, 311
AoxI GGCC 5 cut(s) 29, 48, 111, 166, 350
ApeKI GCWGC 2 cut(s) 79, 316
AspLEI GCGC 3 cut(s) 7, 15, 70
AspS9I GGNCC 5 cut(s) 49, 274, 280, 361, 467
AsuC2I CCSGG 8 cut(s) 28, 89, 90, 102, 278, 354, 365, 391
AsuHPI GGTGA 1 cut(s) 314
AvaI CYCGRG 4 cut(s) 88, 238, 255, 311
AvaII GGWCC 4 cut(s) 274, 280, 361, 467
BaeGI GKGCMC 1 cut(s) 269
BamHI GGATCC 1 cut(s) 227
BanII GRGCYC 1 cut(s) 102
BbvI GCAGC 2 cut(s) 66, 303
BccI CCATC 1 cut(s) 458
BceAI ACGGC 3 cut(s) 16, 98, 211
BcgI CGANNNNNNTGC 2 cut(s) 452, 486
BcnI CCSGG 8 cut(s) 28, 89, 90, 102, 278, 354, 365, 391
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 8
BglI GCCNNNNNGGC 1 cut(s) 37
BglII AGATCT 1 cut(s) 124
BisI GCNGC 6 cut(s) 71, 80, 111, 317, 326, 342
BlsI GCNGC 6 cut(s) 72, 81, 112, 318, 327, 343
Bme1390I CCNGG 8 cut(s) 28, 89, 90, 102, 278, 354, 365, 391
Bme18I GGWCC 4 cut(s) 274, 280, 361, 467
BmeT110I CYCGRG 4 cut(s) 88, 238, 255, 311
BmgT120I GGNCC 5 cut(s) 49, 274, 280, 361, 467
BmiI GGNNCC 6 cut(s) 51, 185, 229, 275, 276, 282
BmrFI CCNGG 8 cut(s) 28, 89, 90, 102, 278, 354, 365, 391
BpuMI CCSGG 8 cut(s) 28, 89, 90, 102, 278, 354, 365, 391
BsaJI CCNNGG 6 cut(s) 88, 89, 237, 323, 353, 389
BsaXI ACNNNNNCTCC 2 cut(s) 99, 129
Bsc4I CCNNNNNNNGG 4 cut(s) 27, 34, 175, 348
Bse118I RCCGGY 2 cut(s) 46, 348
Bse1I ACTGG 1 cut(s) 419
Bse3DI GCAATG 2 cut(s) 457, 492
BseDI CCNNGG 6 cut(s) 88, 89, 237, 323, 353, 389
BseGI GGATG 1 cut(s) 481
BseLI CCNNNNNNNGG 4 cut(s) 27, 34, 175, 348
BseMI GCAATG 2 cut(s) 457, 492
BseNI ACTGG 1 cut(s) 419
BseSI GKGCMC 1 cut(s) 269
BseX3I CGGCCG 3 cut(s) 29, 111, 350
BseXI GCAGC 2 cut(s) 66, 303
BseYI CCCAGC 1 cut(s) 262
BsgI GTGCAG 1 cut(s) 141
Bsh1236I CGCG 4 cut(s) 15, 70, 325, 344
Bsh1285I CGRYCG 5 cut(s) 32, 77, 114, 353, 405
BshFI GGCC 5 cut(s) 31, 50, 113, 168, 352
BsiEI CGRYCG 5 cut(s) 32, 77, 114, 353, 405
BsiHKCI CYCGRG 4 cut(s) 88, 238, 255, 311
BsiSI CCGG 9 cut(s) 28, 47, 89, 102, 278, 349, 353, 364, 391
BslFI GGGAC 3 cut(s) 260, 266, 370
BslI CCNNNNNNNGG 4 cut(s) 27, 34, 175, 348
BsmFI GGGAC 3 cut(s) 260, 266, 370
BsnI GGCC 5 cut(s) 31, 50, 113, 168, 352
BsoBI CYCGRG 4 cut(s) 88, 238, 255, 311
Bsp1286I GDGCHC 2 cut(s) 102, 269
Bsp143I GATC 2 cut(s) 124, 227
BspACI CCGC 9 cut(s) 70, 73, 105, 110, 323, 325, 334, 342, 473
BspANI GGCC 5 cut(s) 31, 50, 113, 168, 352
BspFNI CGCG 4 cut(s) 15, 70, 325, 344
BspLI GGNNCC 6 cut(s) 51, 185, 229, 275, 276, 282
BspPI GGATC 2 cut(s) 222, 235
BspTI CTTAAG 1 cut(s) 8
BsrBI CCGCTC 2 cut(s) 110, 334
BsrDI GCAATG 2 cut(s) 457, 492
BsrFI RCCGGY 2 cut(s) 46, 348
BsrI ACTGG 1 cut(s) 419
BssAI RCCGGY 2 cut(s) 46, 348
BssECI CCNNGG 6 cut(s) 88, 89, 237, 323, 353, 389
BssMI GATC 2 cut(s) 124, 227
Bst4CI ACNGT 2 cut(s) 403, 440
Bst6I CTCTTC 1 cut(s) 166
BstAFI CTTAAG 1 cut(s) 8
BstC8I GCNNGC 3 cut(s) 48, 346, 350
BstDSI CCRYGG 1 cut(s) 323
BstF5I GGATG 1 cut(s) 481
BstFNI CGCG 4 cut(s) 15, 70, 325, 344
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 3 cut(s) 7, 15, 70
BstKTI GATC 2 cut(s) 127, 230
BstMBI GATC 2 cut(s) 124, 227
BstMCI CGRYCG 5 cut(s) 32, 77, 114, 353, 405
BstMWI GCNNNNNNNGC 8 cut(s) 37, 76, 79, 119, 316, 322, 325, 331
BstSCI CCNGG 8 cut(s) 26, 87, 88, 100, 276, 352, 363, 389
BstSLI GKGCMC 1 cut(s) 269
BstUI CGCG 4 cut(s) 15, 70, 325, 344
BstV1I GCAGC 2 cut(s) 66, 303
BstX2I RGATCY 2 cut(s) 124, 227
BstYI RGATCY 2 cut(s) 124, 227
BstZI CGGCCG 3 cut(s) 29, 111, 350
BsuRI GGCC 5 cut(s) 31, 50, 113, 168, 352
BtgI CCRYGG 1 cut(s) 323
BtgZI GCGATG 1 cut(s) 477
BtsCI GGATG 1 cut(s) 481
Cac8I GCNNGC 3 cut(s) 48, 346, 350
CfoI GCGC 3 cut(s) 7, 15, 70
Cfr10I RCCGGY 2 cut(s) 46, 348
Cfr13I GGNCC 5 cut(s) 49, 274, 280, 361, 467
Cfr42I CCGCGG 1 cut(s) 326
Cfr9I CCCGGG 1 cut(s) 88
CpoI CGGWCCG 1 cut(s) 361
Csp6I GTAC 1 cut(s) 418
CspI CGGWCCG 1 cut(s) 361
CviAII CATG 2 cut(s) 188, 207
CviQI GTAC 1 cut(s) 418
DpnI GATC 2 cut(s) 126, 229
DpnII GATC 2 cut(s) 124, 227
EaeI YGGCCR 3 cut(s) 29, 111, 350
EagI CGGCCG 3 cut(s) 29, 111, 350
Eam1104I CTCTTC 1 cut(s) 166
EarI CTCTTC 1 cut(s) 166
EciI GGCGGA 1 cut(s) 120
EclXI CGGCCG 3 cut(s) 29, 111, 350
Eco24I GRGCYC 1 cut(s) 102
Eco47I GGWCC 4 cut(s) 274, 280, 361, 467
Eco52I CGGCCG 3 cut(s) 29, 111, 350
Eco88I CYCGRG 4 cut(s) 88, 238, 255, 311
EcoO109I RGGNCCY 1 cut(s) 274
EcoT38I GRGCYC 1 cut(s) 102
FaeI CATG 2 cut(s) 191, 210
FaiI YATR 3 cut(s) 24, 189, 208
FaqI GGGAC 3 cut(s) 260, 266, 370
FatI CATG 2 cut(s) 187, 206
FauI CCCGC 1 cut(s) 327
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 6 cut(s) 71, 80, 111, 317, 326, 342
FokI GGATG 1 cut(s) 488
FriOI GRGCYC 1 cut(s) 102
Fsp4HI GCNGC 6 cut(s) 71, 80, 111, 317, 326, 342
GlaI GCGC 3 cut(s) 6, 14, 69
GluI GCNGC 6 cut(s) 71, 80, 111, 317, 326, 342
GsaI CCCAGC 1 cut(s) 266
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 5 cut(s) 31, 50, 113, 168, 352
HapII CCGG 9 cut(s) 28, 47, 89, 102, 278, 349, 353, 364, 391
HhaI GCGC 3 cut(s) 7, 15, 70
Hin1II CATG 2 cut(s) 191, 210
Hin6I GCGC 3 cut(s) 5, 13, 68
HinP1I GCGC 3 cut(s) 5, 13, 68
HincII GTYRAC 2 cut(s) 406, 481
HindII GTYRAC 2 cut(s) 406, 481
HinfI GANTC 2 cut(s) 407, 431
HpaI GTTAAC 1 cut(s) 481
HpaII CCGG 9 cut(s) 28, 47, 89, 102, 278, 349, 353, 364, 391
HphI GGTGA 1 cut(s) 314
Hpy166II GTNNAC 4 cut(s) 193, 305, 406, 481
Hpy188I TCNGA 1 cut(s) 436
Hpy188III TCNNGA 2 cut(s) 240, 283
Hpy8I GTNNAC 4 cut(s) 193, 305, 406, 481
Hpy99I CGWCG 3 cut(s) 37, 119, 295
HpyAV CCTTC 2 cut(s) 158, 385
HpyCH4III ACNGT 2 cut(s) 403, 440
HpyCH4V TGCA 3 cut(s) 82, 122, 204
HpyF10VI GCNNNNNNNGC 8 cut(s) 37, 76, 79, 119, 316, 322, 325, 331
Hsp92II CATG 2 cut(s) 191, 210
HspAI GCGC 3 cut(s) 5, 13, 68
KflI GGGWCCC 1 cut(s) 274
KroI GCCGGC 2 cut(s) 46, 348
KroNI GCCGGC 2 cut(s) 48, 350
KspAI GTTAAC 1 cut(s) 481
KspI CCGCGG 1 cut(s) 326
Kzo9I GATC 2 cut(s) 124, 227
LmnI GCTCC 2 cut(s) 107, 377
Lsp1109I GCAGC 2 cut(s) 66, 303
MaeIII GTNAC 2 cut(s) 16, 232
MalI GATC 2 cut(s) 126, 229
MbiI CCGCTC 2 cut(s) 110, 334
MboI GATC 2 cut(s) 124, 227
MboII GAAGA 1 cut(s) 183
MflI RGATCY 2 cut(s) 124, 227
MhlI GDGCHC 2 cut(s) 102, 269
MluCI AATT 1 cut(s) 444
MlyI GAGTC 1 cut(s) 401
MmeI TCCRAC 1 cut(s) 459
MnlI CCTC 4 cut(s) 57, 167, 247, 251
MroNI GCCGGC 2 cut(s) 46, 348
MseI TTAA 4 cut(s) 9, 443, 447, 480
MslI CAYNNNNRTG 1 cut(s) 462
MspA1I CMGCKG 1 cut(s) 325
MspCI CTTAAG 1 cut(s) 8
MspI CCGG 9 cut(s) 28, 47, 89, 102, 278, 349, 353, 364, 391
MspR9I CCNGG 8 cut(s) 28, 89, 90, 102, 278, 354, 365, 391
MvnI CGCG 4 cut(s) 15, 70, 325, 344
MwoI GCNNNNNNNGC 8 cut(s) 37, 76, 79, 119, 316, 322, 325, 331
NaeI GCCGGC 2 cut(s) 48, 350
NciI CCSGG 8 cut(s) 28, 89, 90, 102, 278, 354, 365, 391
NdeII GATC 2 cut(s) 124, 227
NgoMIV GCCGGC 2 cut(s) 46, 348
NlaIII CATG 2 cut(s) 191, 210
NlaIV GGNNCC 6 cut(s) 51, 185, 229, 275, 276, 282
NmuCI GTSAC 1 cut(s) 16
PacI TTAATTAA 1 cut(s) 447
PaeR7I CTCGAG 2 cut(s) 255, 311
PcsI WCGNNNNNNNCGW 1 cut(s) 407
PdiI GCCGGC 2 cut(s) 48, 350
PfeI GAWTC 1 cut(s) 431
PkrI GCNGC 6 cut(s) 72, 81, 112, 318, 327, 343
PleI GAGTC 1 cut(s) 401
PpsI GAGTC 1 cut(s) 401
PpuMI RGGWCCY 1 cut(s) 274
Psp5II RGGWCCY 1 cut(s) 274
PspFI CCCAGC 1 cut(s) 262
PspN4I GGNNCC 6 cut(s) 51, 185, 229, 275, 276, 282
PspPI GGNCC 5 cut(s) 49, 274, 280, 361, 467
PspPPI RGGWCCY 1 cut(s) 274
PspXI VCTCGAGB 2 cut(s) 255, 311
PsuI RGATCY 2 cut(s) 124, 227
RsaI GTAC 1 cut(s) 419
RsaNI GTAC 1 cut(s) 418
RseI CAYNNNNRTG 1 cut(s) 462
Rsr2I CGGWCCG 1 cut(s) 361
RsrII CGGWCCG 1 cut(s) 361
SacII CCGCGG 1 cut(s) 326
SalI GTCGAC 1 cut(s) 404
SaqAI TTAA 4 cut(s) 9, 443, 447, 480
SatI GCNGC 6 cut(s) 71, 80, 111, 317, 326, 342
Sau3AI GATC 2 cut(s) 124, 227
Sau96I GGNCC 5 cut(s) 49, 274, 280, 361, 467
SchI GAGTC 1 cut(s) 401
ScrFI CCNGG 8 cut(s) 28, 89, 90, 102, 278, 354, 365, 391
SduI GDGCHC 2 cut(s) 102, 269
SetI ASST 4 cut(s) 23, 185, 239, 318
Sfr274I CTCGAG 2 cut(s) 255, 311
Sfr303I CCGCGG 1 cut(s) 326
SgrBI CCGCGG 1 cut(s) 326
SinI GGWCC 4 cut(s) 274, 280, 361, 467
SlaI CTCGAG 2 cut(s) 255, 311
SmaI CCCGGG 1 cut(s) 90
SmiMI CAYNNNNRTG 1 cut(s) 462
SmlI CTYRAG 3 cut(s) 8, 255, 311
SmoI CTYRAG 3 cut(s) 8, 255, 311
Sse9I AATT 1 cut(s) 444
SsiI CCGC 9 cut(s) 70, 73, 105, 110, 323, 325, 334, 342, 473
SspI AATATT 1 cut(s) 146
StyD4I CCNGG 8 cut(s) 26, 87, 88, 100, 276, 352, 363, 389
TaaI ACNGT 2 cut(s) 403, 440
TaqI TCGA 4 cut(s) 256, 312, 405, 410
TasI AATT 1 cut(s) 444
TauI GCSGC 4 cut(s) 73, 113, 328, 344
TfiI GAWTC 1 cut(s) 431
Tru1I TTAA 4 cut(s) 9, 443, 447, 480
Tru9I TTAA 4 cut(s) 9, 443, 447, 480
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 2 cut(s) 79, 316
Tsp45I GTSAC 1 cut(s) 16
TspGWI ACGGA 3 cut(s) 220, 374, 435
TspMI CCCGGG 1 cut(s) 88
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 4 cut(s) 274, 280, 361, 467
XhoI CTCGAG 2 cut(s) 255, 311
XmaI CCCGGG 1 cut(s) 88
XmiI GTMKAC 1 cut(s) 405
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.