Rroxscaffold_35G00441010

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000035
OG0000104
Physical Location & Seq
Reverse (-)
24 .. 772
749 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_35G00441010.1

Sequence Viewer

Length: 573 bp
ATGGCGCTTAAGCGCGTGACCTATACCCGGCCGTCGGGGCAAGTGCCAGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCCGGCGGAGGGCGGAGTGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTGAAGGCCCACCCCGAAGGCTCAGGGAGGTAGGGTCCAGGGCCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGCCCTTGAAAATCCGGAGGACCGAGTGCCAACGGGGCCGTACTTAACCGCACATCTCCAAGGGAACAGCCTTGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGGGGCTGGGCACGGGGGTCCCGGCCCCGACCCCGTCCGATGTCGGTGAACTGCTCGAGCGTCCGCGGCGAGAGCGGGTCGCGCGTGCCGGCCGGGGACGGACTTCGGGAACGCTCCTTCGGGGCTTTCCCGGCGTTCAACAGTCGACTCGAACTGGTACGGACAAGGGGAATCCGACTGTTTAAAATTCACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

190

Amino Acids

20.51

Weight (kDa)

11.95

Isoelectric Point (pI)

57.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 125
AccB1I GGYRCC 1 cut(s) 236
AccBSI CCGCTC 1 cut(s) 453
AccI GTMKAC 1 cut(s) 523
AccII CGCG 6 cut(s) 15, 70, 215, 444, 460, 462
AccIII TCCGGA 1 cut(s) 250
AclWI GGATC 2 cut(s) 345, 358
AcoI YGGCCR 2 cut(s) 29, 468
AcsI RAATTY 1 cut(s) 564
AcyI GRCGYC 2 cut(s) 122, 237
AfaI GTAC 2 cut(s) 278, 537
AfiI CCNNNNNNNGG 4 cut(s) 27, 34, 107, 108
AflII CTTAAG 1 cut(s) 8
AgsI TTSAA 3 cut(s) 155, 245, 517
AjiI CACGTC 1 cut(s) 211
AjnI CCWGG 2 cut(s) 87, 188
Alw21I GWGCWC 1 cut(s) 205
Alw26I GTCTC 1 cut(s) 113
AlwI GGATC 2 cut(s) 345, 358
Ama87I CYCGRG 4 cut(s) 136, 361, 378, 433
Aor13HI TCCGGA 1 cut(s) 250
AoxI GGCC 7 cut(s) 29, 132, 157, 192, 272, 401, 468
ApeKI GCWGC 1 cut(s) 79
ApoI RAATTY 1 cut(s) 564
AspLEI GCGC 6 cut(s) 7, 15, 70, 231, 239, 462
AspS9I GGNCC 8 cut(s) 132, 158, 186, 192, 256, 272, 396, 402
AsuC2I CCSGG 6 cut(s) 28, 102, 234, 400, 472, 509
AsuHPI GGTGA 1 cut(s) 436
AvaI CYCGRG 4 cut(s) 136, 361, 378, 433
AvaII GGWCC 3 cut(s) 186, 256, 396
BaeGI GKGCMC 1 cut(s) 391
BamHI GGATCC 1 cut(s) 350
BanI GGYRCC 1 cut(s) 236
BanII GRGCYC 1 cut(s) 102
Bbv12I GWGCWC 1 cut(s) 205
BbvI GCAGC 1 cut(s) 66
BceAI ACGGC 2 cut(s) 16, 259
BciT130I CCWGG 2 cut(s) 89, 190
BcnI CCSGG 6 cut(s) 28, 102, 234, 400, 472, 509
BcoDI GTCTC 1 cut(s) 113
BfoI RGCGCY 2 cut(s) 8, 240
BfrI CTTAAG 1 cut(s) 8
BglI GCCNNNNNGGC 2 cut(s) 37, 271
BisI GCNGC 3 cut(s) 71, 80, 445
BlsI GCNGC 3 cut(s) 72, 81, 446
Bme1390I CCNGG 8 cut(s) 28, 89, 102, 190, 234, 400, 472, 509
Bme18I GGWCC 3 cut(s) 186, 256, 396
BmeT110I CYCGRG 4 cut(s) 136, 361, 378, 433
BmgBI CACGTC 1 cut(s) 211
BmgT120I GGNCC 8 cut(s) 132, 158, 186, 192, 256, 272, 396, 402
BmiI GGNNCC 8 cut(s) 133, 187, 238, 273, 352, 397, 398, 404
BmrFI CCNGG 8 cut(s) 28, 89, 102, 190, 234, 400, 472, 509
Bpu10I CCTNAGC 1 cut(s) 173
BpuMI CCSGG 6 cut(s) 28, 102, 234, 400, 472, 509
BsaHI GRCGYC 2 cut(s) 122, 237
BsaJI CCNNGG 9 cut(s) 88, 135, 189, 232, 295, 307, 360, 442, 471
BsaWI WCCGGW 2 cut(s) 223, 250
BsaXI ACNNNNNCTCC 2 cut(s) 170, 200
Bsc4I CCNNNNNNNGG 4 cut(s) 27, 34, 107, 108
Bse118I RCCGGY 1 cut(s) 466
Bse1I ACTGG 1 cut(s) 537
BseAI TCCGGA 1 cut(s) 250
BseBI CCWGG 2 cut(s) 89, 190
BseDI CCNNGG 9 cut(s) 88, 135, 189, 232, 295, 307, 360, 442, 471
BseLI CCNNNNNNNGG 4 cut(s) 27, 34, 107, 108
BseMII CTCAG 1 cut(s) 187
BseNI ACTGG 1 cut(s) 537
BseSI GKGCMC 1 cut(s) 391
BseX3I CGGCCG 2 cut(s) 29, 468
BseXI GCAGC 1 cut(s) 66
BseYI CCCAGC 1 cut(s) 384
Bsh1236I CGCG 6 cut(s) 15, 70, 215, 444, 460, 462
Bsh1285I CGRYCG 3 cut(s) 32, 77, 471
BshFI GGCC 7 cut(s) 31, 134, 159, 194, 274, 403, 470
BshNI GGYRCC 1 cut(s) 236
BsiEI CGRYCG 3 cut(s) 32, 77, 471
BsiHKAI GWGCWC 1 cut(s) 205
BsiHKCI CYCGRG 4 cut(s) 136, 361, 378, 433
BslFI GGGAC 2 cut(s) 382, 488
BslI CCNNNNNNNGG 4 cut(s) 27, 34, 107, 108
BsmAI GTCTC 1 cut(s) 113
BsmBI CGTCTC 1 cut(s) 113
BsmFI GGGAC 2 cut(s) 382, 488
BsnI GGCC 7 cut(s) 31, 134, 159, 194, 274, 403, 470
BsoBI CYCGRG 4 cut(s) 136, 361, 378, 433
Bsp1286I GDGCHC 3 cut(s) 102, 205, 391
Bsp13I TCCGGA 1 cut(s) 250
Bsp143I GATC 1 cut(s) 350
BspANI GGCC 7 cut(s) 31, 134, 159, 194, 274, 403, 470
BspCNI CTCAG 1 cut(s) 186
BspEI TCCGGA 1 cut(s) 250
BspFNI CGCG 6 cut(s) 15, 70, 215, 444, 460, 462
BspLI GGNNCC 8 cut(s) 133, 187, 238, 273, 352, 397, 398, 404
BspPI GGATC 2 cut(s) 345, 358
BspQI GCTCTTC 1 cut(s) 193
BspT107I GGYRCC 1 cut(s) 236
BspTI CTTAAG 1 cut(s) 8
BsrBI CCGCTC 1 cut(s) 453
BsrFI RCCGGY 1 cut(s) 466
BsrI ACTGG 1 cut(s) 537
BssAI RCCGGY 1 cut(s) 466
BssECI CCNNGG 9 cut(s) 88, 135, 189, 232, 295, 307, 360, 442, 471
BssMI GATC 1 cut(s) 350
BssNI GRCGYC 2 cut(s) 122, 237
BssT1I CCWWGG 2 cut(s) 295, 307
Bst2UI CCWGG 2 cut(s) 89, 190
Bst4CI ACNGT 2 cut(s) 521, 558
Bst6I CTCTTC 2 cut(s) 136, 193
BstACI GRCGYC 2 cut(s) 122, 237
BstAFI CTTAAG 1 cut(s) 8
BstC8I GCNNGC 3 cut(s) 48, 464, 468
BstDEI CTNAG 1 cut(s) 173
BstDSI CCRYGG 1 cut(s) 442
BstFNI CGCG 6 cut(s) 15, 70, 215, 444, 460, 462
BstH2I RGCGCY 2 cut(s) 8, 240
BstHHI GCGC 6 cut(s) 7, 15, 70, 231, 239, 462
BstKTI GATC 1 cut(s) 353
BstMAI GTCTC 1 cut(s) 113
BstMBI GATC 1 cut(s) 350
BstMCI CGRYCG 3 cut(s) 32, 77, 471
BstMWI GCNNNNNNNGC 9 cut(s) 37, 76, 79, 200, 271, 444, 450, 459, 509
BstNI CCWGG 2 cut(s) 89, 190
BstSCI CCNGG 8 cut(s) 26, 87, 100, 188, 232, 398, 470, 507
BstSLI GKGCMC 1 cut(s) 391
BstUI CGCG 6 cut(s) 15, 70, 215, 444, 460, 462
BstV1I GCAGC 1 cut(s) 66
BstX2I RGATCY 1 cut(s) 350
BstYI RGATCY 1 cut(s) 350
BstZI CGGCCG 2 cut(s) 29, 468
BsuRI GGCC 7 cut(s) 31, 134, 159, 194, 274, 403, 470
BtgI CCRYGG 1 cut(s) 442
BtrI CACGTC 1 cut(s) 211
BtsIMutI CAGTG 1 cut(s) 568
Cac8I GCNNGC 3 cut(s) 48, 464, 468
CfoI GCGC 6 cut(s) 7, 15, 70, 231, 239, 462
Cfr10I RCCGGY 1 cut(s) 466
Cfr13I GGNCC 8 cut(s) 132, 158, 186, 192, 256, 272, 396, 402
Cfr42I CCGCGG 1 cut(s) 445
CseI GACGC 1 cut(s) 427
Csp6I GTAC 2 cut(s) 277, 536
CviQI GTAC 2 cut(s) 277, 536
DdeI CTNAG 1 cut(s) 173
DinI GGCGCC 1 cut(s) 238
DpnI GATC 1 cut(s) 352
DpnII GATC 1 cut(s) 350
DraI TTTAAA 1 cut(s) 562
EaeI YGGCCR 2 cut(s) 29, 468
EagI CGGCCG 2 cut(s) 29, 468
Eam1104I CTCTTC 2 cut(s) 136, 193
EarI CTCTTC 2 cut(s) 136, 193
EciI GGCGGA 2 cut(s) 120, 127
EclXI CGGCCG 2 cut(s) 29, 468
Eco130I CCWWGG 2 cut(s) 295, 307
Eco24I GRGCYC 1 cut(s) 102
Eco47I GGWCC 3 cut(s) 186, 256, 396
Eco52I CGGCCG 2 cut(s) 29, 468
Eco88I CYCGRG 4 cut(s) 136, 361, 378, 433
EcoO109I RGGNCCY 2 cut(s) 132, 396
EcoRII CCWGG 2 cut(s) 87, 188
EcoT14I CCWWGG 2 cut(s) 295, 307
EcoT38I GRGCYC 1 cut(s) 102
EgeI GGCGCC 1 cut(s) 238
EheI GGCGCC 1 cut(s) 238
ErhI CCWWGG 2 cut(s) 295, 307
Esp3I CGTCTC 1 cut(s) 113
FaiI YATR 1 cut(s) 24
FaqI GGGAC 2 cut(s) 382, 488
FauI CCCGC 2 cut(s) 121, 446
FblI GTMKAC 1 cut(s) 523
Fnu4HI GCNGC 3 cut(s) 71, 80, 445
FriOI GRGCYC 1 cut(s) 102
Fsp4HI GCNGC 3 cut(s) 71, 80, 445
GlaI GCGC 6 cut(s) 6, 14, 69, 230, 238, 461
GluI GCNGC 3 cut(s) 71, 80, 445
GsaI CCCAGC 1 cut(s) 388
HaeII RGCGCY 2 cut(s) 8, 240
HaeIII GGCC 7 cut(s) 31, 134, 159, 194, 274, 403, 470
HgaI GACGC 1 cut(s) 427
HhaI GCGC 6 cut(s) 7, 15, 70, 231, 239, 462
Hin1I GRCGYC 2 cut(s) 122, 237
Hin6I GCGC 6 cut(s) 5, 13, 68, 229, 237, 460
HinP1I GCGC 6 cut(s) 5, 13, 68, 229, 237, 460
HincII GTYRAC 1 cut(s) 524
HindII GTYRAC 1 cut(s) 524
HinfI GANTC 2 cut(s) 525, 549
HphI GGTGA 1 cut(s) 436
Hpy166II GTNNAC 2 cut(s) 427, 524
Hpy188I TCNGA 2 cut(s) 417, 554
Hpy188III TCNNGA 4 cut(s) 138, 251, 363, 485
Hpy8I GTNNAC 2 cut(s) 427, 524
Hpy99I CGWCG 3 cut(s) 37, 127, 215
HpyAV CCTTC 3 cut(s) 149, 162, 505
HpyCH4III ACNGT 2 cut(s) 521, 558
HpyCH4IV ACGT 2 cut(s) 122, 210
HpyCH4V TGCA 1 cut(s) 82
HpyF10VI GCNNNNNNNGC 9 cut(s) 37, 76, 79, 200, 271, 444, 450, 459, 509
HpyF3I CTNAG 1 cut(s) 173
HpySE526I ACGT 2 cut(s) 122, 210
Hsp92I GRCGYC 2 cut(s) 122, 237
HspAI GCGC 6 cut(s) 5, 13, 68, 229, 237, 460
KasI GGCGCC 1 cut(s) 236
KflI GGGWCCC 1 cut(s) 396
Kpn2I TCCGGA 1 cut(s) 250
KroI GCCGGC 1 cut(s) 466
KroNI GCCGGC 1 cut(s) 468
KspI CCGCGG 1 cut(s) 445
Kzo9I GATC 1 cut(s) 350
LguI GCTCTTC 1 cut(s) 193
LmnI GCTCC 1 cut(s) 497
Lsp1109I GCAGC 1 cut(s) 66
MaeII ACGT 2 cut(s) 122, 210
MaeIII GTNAC 2 cut(s) 16, 355
MalI GATC 1 cut(s) 352
MbiI CCGCTC 1 cut(s) 453
MboI GATC 1 cut(s) 350
MboII GAAGA 2 cut(s) 153, 210
MflI RGATCY 1 cut(s) 350
MhlI GDGCHC 3 cut(s) 102, 205, 391
MluCI AATT 1 cut(s) 564
Mly113I GGCGCC 1 cut(s) 237
MlyI GAGTC 1 cut(s) 519
MnlI CCTC 6 cut(s) 57, 101, 145, 172, 247, 370
MroI TCCGGA 1 cut(s) 250
MroNI GCCGGC 1 cut(s) 466
MseI TTAA 3 cut(s) 9, 281, 561
MspA1I CMGCKG 1 cut(s) 444
MspCI CTTAAG 1 cut(s) 8
MspR9I CCNGG 8 cut(s) 28, 89, 102, 190, 234, 400, 472, 509
MvaI CCWGG 2 cut(s) 89, 190
MvnI CGCG 6 cut(s) 15, 70, 215, 444, 460, 462
MwoI GCNNNNNNNGC 9 cut(s) 37, 76, 79, 200, 271, 444, 450, 459, 509
NaeI GCCGGC 1 cut(s) 468
NarI GGCGCC 1 cut(s) 237
NciI CCSGG 6 cut(s) 28, 102, 234, 400, 472, 509
NdeII GATC 1 cut(s) 350
NgoMIV GCCGGC 1 cut(s) 466
NlaIV GGNNCC 8 cut(s) 133, 187, 238, 273, 352, 397, 398, 404
NmuCI GTSAC 1 cut(s) 16
PaeR7I CTCGAG 1 cut(s) 433
PciSI GCTCTTC 1 cut(s) 193
PdiI GCCGGC 1 cut(s) 468
PfeI GAWTC 1 cut(s) 549
PflFI GACNNNGTC 1 cut(s) 411
PkrI GCNGC 3 cut(s) 72, 81, 446
PleI GAGTC 1 cut(s) 519
PluTI GGCGCC 1 cut(s) 240
PpsI GAGTC 1 cut(s) 519
PpuMI RGGWCCY 1 cut(s) 396
Psp5II RGGWCCY 1 cut(s) 396
Psp6I CCWGG 2 cut(s) 87, 188
PspFI CCCAGC 1 cut(s) 384
PspGI CCWGG 2 cut(s) 87, 188
PspN4I GGNNCC 8 cut(s) 133, 187, 238, 273, 352, 397, 398, 404
PspPI GGNCC 8 cut(s) 132, 158, 186, 192, 256, 272, 396, 402
PspPPI RGGWCCY 1 cut(s) 396
PspXI VCTCGAGB 1 cut(s) 433
PsuI RGATCY 1 cut(s) 350
PsyI GACNNNGTC 1 cut(s) 411
RsaI GTAC 2 cut(s) 278, 537
RsaNI GTAC 2 cut(s) 277, 536
SacII CCGCGG 1 cut(s) 445
SalI GTCGAC 1 cut(s) 522
SapI GCTCTTC 1 cut(s) 193
SaqAI TTAA 3 cut(s) 9, 281, 561
SatI GCNGC 3 cut(s) 71, 80, 445
Sau3AI GATC 1 cut(s) 350
Sau96I GGNCC 8 cut(s) 132, 158, 186, 192, 256, 272, 396, 402
SchI GAGTC 1 cut(s) 519
ScrFI CCNGG 8 cut(s) 28, 89, 102, 190, 234, 400, 472, 509
SduI GDGCHC 3 cut(s) 102, 205, 391
SetI ASST 6 cut(s) 23, 90, 125, 183, 213, 362
SfoI GGCGCC 1 cut(s) 238
Sfr274I CTCGAG 1 cut(s) 433
Sfr303I CCGCGG 1 cut(s) 445
SgrBI CCGCGG 1 cut(s) 445
SinI GGWCC 3 cut(s) 186, 256, 396
SlaI CTCGAG 1 cut(s) 433
SmlI CTYRAG 2 cut(s) 8, 433
SmoI CTYRAG 2 cut(s) 8, 433
Sse9I AATT 1 cut(s) 564
SspDI GGCGCC 1 cut(s) 236
StyD4I CCNGG 8 cut(s) 26, 87, 100, 188, 232, 398, 470, 507
StyI CCWWGG 2 cut(s) 295, 307
TaaI ACNGT 2 cut(s) 521, 558
TaiI ACGT 2 cut(s) 125, 213
TaqI TCGA 3 cut(s) 434, 523, 528
TaqII GACCGA 1 cut(s) 273
TasI AATT 1 cut(s) 564
TauI GCSGC 2 cut(s) 73, 447
TfiI GAWTC 1 cut(s) 549
Tru1I TTAA 3 cut(s) 9, 281, 561
Tru9I TTAA 3 cut(s) 9, 281, 561
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 1 cut(s) 79
Tsp45I GTSAC 1 cut(s) 16
TspGWI ACGGA 3 cut(s) 343, 492, 553
Tth111I GACNNNGTC 1 cut(s) 411
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 3 cut(s) 186, 256, 396
XapI RAATTY 1 cut(s) 564
XhoI CTCGAG 1 cut(s) 433
XmiI GTMKAC 1 cut(s) 523
ZraI GACGTC 1 cut(s) 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.