Rroxscaffold_17G00435640

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000017
OG0000104
Physical Location & Seq
Reverse (-)
243828 .. 245913
2086 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_17G00435640.1

Sequence Viewer

Length: 570 bp
ATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGTCTCCTCCGCGGCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAAGGAAGTTTGAGGCAATAACAGCGGATGGGGGCGGCGATGCGCCTCGGTCGGATGTGGAACGGTCACAAGCCGGTCCGCCACTCGACTCGGGGCGTGGACCGTTACGGATTGCGGCGGCGGCCAAAGCCGGGCTGTTGATATGCCGTGGAGACGTCGTCGACGCGATCATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCTGCTAATGTGCGGGATCCCTTTGCGGGTGCACCGCCGACCGACCTTGATCTTCGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCGAGAGGAAACTCGGTGGAGGCCCGCAGCGATGCGACGTGCAAATCGTTCGTCGACTTGGGTATAGGGGCGAAAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

189

Amino Acids

19.79

Weight (kDa)

5.76

Isoelectric Point (pI)

40.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 303
AccBSI CCGCTC 1 cut(s) 480
AccI GTMKAC 2 cut(s) 306, 543
AccII CGCG 2 cut(s) 110, 311
AclWI GGATC 2 cut(s) 374, 387
AcoI YGGCCR 4 cut(s) 17, 111, 134, 267
AcyI GRCGYC 1 cut(s) 300
AfiI CCNNNNNNNGG 4 cut(s) 276, 389, 461, 481
AjiI CACGTC 1 cut(s) 528
AluBI AGCT 2 cut(s) 90, 117
AluI AGCT 2 cut(s) 90, 117
Alw21I GWGCWC 2 cut(s) 364, 397
Alw26I GTCTC 4 cut(s) 63, 106, 291, 341
Alw44I GTGCAC 1 cut(s) 393
AlwI GGATC 2 cut(s) 374, 387
Ama87I CYCGRG 1 cut(s) 235
AoxI GGCC 6 cut(s) 17, 111, 134, 143, 267, 510
ApaLI GTGCAC 1 cut(s) 393
ApeKI GCWGC 2 cut(s) 324, 516
ArsI GACNNNNNNTTYG 2 cut(s) 525, 557
AspLEI GCGC 2 cut(s) 190, 333
AspS9I GGNCC 4 cut(s) 221, 245, 451, 511
AsuC2I CCSGG 1 cut(s) 277
AsuHPI GGTGA 1 cut(s) 476
AvaI CYCGRG 1 cut(s) 235
AvaII GGWCC 3 cut(s) 221, 245, 451
BaeGI GKGCMC 1 cut(s) 397
BamHI GGATCC 1 cut(s) 379
Bbv12I GWGCWC 2 cut(s) 364, 397
BbvCI CCTCAGC 1 cut(s) 74
BbvI GCAGC 2 cut(s) 336, 528
BccI CCATC 2 cut(s) 167, 455
BceAI ACGGC 3 cut(s) 4, 276, 318
BcgI CGANNNNNNTGC 4 cut(s) 428, 462, 520, 554
BcnI CCSGG 1 cut(s) 277
BcoDI GTCTC 4 cut(s) 63, 106, 291, 341
BfaI CTAG 1 cut(s) 87
BglI GCCNNNNNGGC 2 cut(s) 142, 339
BisI GCNGC 8 cut(s) 111, 137, 181, 261, 264, 267, 325, 517
BlsI GCNGC 8 cut(s) 112, 138, 182, 262, 265, 268, 326, 518
Bme1390I CCNGG 1 cut(s) 277
Bme18I GGWCC 3 cut(s) 221, 245, 451
BmeT110I CYCGRG 1 cut(s) 235
BmgBI CACGTC 1 cut(s) 528
BmgT120I GGNCC 4 cut(s) 221, 245, 451, 511
BmiI GGNNCC 3 cut(s) 381, 452, 453
BmrFI CCNGG 1 cut(s) 277
BmsI GCATC 3 cut(s) 175, 361, 511
BplI GAGNNNNNCTC 2 cut(s) 89, 121
Bpu10I CCTNAGC 3 cut(s) 74, 140, 476
BpuMI CCSGG 1 cut(s) 277
BsaHI GRCGYC 1 cut(s) 300
BsaI GGTCTC 2 cut(s) 63, 106
BsaJI CCNNGG 4 cut(s) 108, 146, 191, 292
BsaXI ACNNNNNCTCC 2 cut(s) 288, 318
Bsc4I CCNNNNNNNGG 4 cut(s) 276, 389, 461, 481
Bse118I RCCGGY 1 cut(s) 218
BseDI CCNNGG 4 cut(s) 108, 146, 191, 292
BseGI GGATG 2 cut(s) 178, 205
BseLI CCNNNNNNNGG 4 cut(s) 276, 389, 461, 481
BseMII CTCAG 2 cut(s) 88, 467
BseRI GAGGAG 1 cut(s) 94
BseSI GKGCMC 1 cut(s) 397
BseXI GCAGC 2 cut(s) 336, 528
Bsh1236I CGCG 2 cut(s) 110, 311
Bsh1285I CGRYCG 2 cut(s) 197, 405
BshFI GGCC 6 cut(s) 19, 113, 136, 145, 269, 512
BsiEI CGRYCG 2 cut(s) 197, 405
BsiHKAI GWGCWC 2 cut(s) 364, 397
BsiHKCI CYCGRG 1 cut(s) 235
BsiSI CCGG 2 cut(s) 219, 276
BslFI GGGAC 2 cut(s) 141, 464
BslI CCNNNNNNNGG 4 cut(s) 276, 389, 461, 481
BsmAI GTCTC 4 cut(s) 63, 106, 291, 341
BsmBI CGTCTC 2 cut(s) 291, 341
BsmFI GGGAC 2 cut(s) 141, 464
BsnI GGCC 6 cut(s) 19, 113, 136, 145, 269, 512
Bso31I GGTCTC 2 cut(s) 63, 106
BsoBI CYCGRG 1 cut(s) 235
Bsp1286I GDGCHC 2 cut(s) 364, 397
Bsp143I GATC 3 cut(s) 312, 379, 412
BspANI GGCC 6 cut(s) 19, 113, 136, 145, 269, 512
BspCNI CTCAG 2 cut(s) 87, 468
BspFNI CGCG 2 cut(s) 110, 311
BspLI GGNNCC 3 cut(s) 381, 452, 453
BspPI GGATC 2 cut(s) 374, 387
BspTNI GGTCTC 2 cut(s) 63, 106
BsrBI CCGCTC 1 cut(s) 480
BsrFI RCCGGY 1 cut(s) 218
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 4 cut(s) 108, 146, 191, 292
BssMI GATC 3 cut(s) 312, 379, 412
BssNI GRCGYC 1 cut(s) 300
BssT1I CCWWGG 1 cut(s) 146
Bst4CI ACNGT 2 cut(s) 210, 249
BstACI GRCGYC 1 cut(s) 300
BstC8I GCNNGC 7 cut(s) 80, 115, 329, 344, 360, 441, 514
BstDEI CTNAG 5 cut(s) 25, 74, 121, 140, 476
BstDSI CCRYGG 2 cut(s) 108, 292
BstF5I GGATG 2 cut(s) 178, 205
BstFNI CGCG 2 cut(s) 110, 311
BstHHI GCGC 2 cut(s) 190, 333
BstKTI GATC 3 cut(s) 315, 382, 415
BstMAI GTCTC 4 cut(s) 63, 106, 291, 341
BstMBI GATC 3 cut(s) 312, 379, 412
BstMCI CGRYCG 2 cut(s) 197, 405
BstMWI GCNNNNNNNGC 6 cut(s) 142, 167, 266, 272, 330, 339
BstNSI RCATGY 2 cut(s) 331, 443
BstSCI CCNGG 1 cut(s) 275
BstSLI GKGCMC 1 cut(s) 397
BstUI CGCG 2 cut(s) 110, 311
BstV1I GCAGC 2 cut(s) 336, 528
BstX2I RGATCY 1 cut(s) 379
BstYI RGATCY 1 cut(s) 379
BsuRI GGCC 6 cut(s) 19, 113, 136, 145, 269, 512
BtgI CCRYGG 2 cut(s) 108, 292
BtgZI GCGATG 2 cut(s) 198, 534
BtrI CACGTC 1 cut(s) 528
BtsCI GGATG 2 cut(s) 178, 205
Cac8I GCNNGC 7 cut(s) 80, 115, 329, 344, 360, 441, 514
CfoI GCGC 2 cut(s) 190, 333
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 4 cut(s) 221, 245, 451, 511
Cfr42I CCGCGG 1 cut(s) 111
CpoI CGGWCCG 1 cut(s) 221
CseI GACGC 1 cut(s) 317
CspI CGGWCCG 1 cut(s) 221
CviAII CATG 4 cut(s) 15, 316, 328, 440
DdeI CTNAG 5 cut(s) 25, 74, 121, 140, 476
DpnI GATC 3 cut(s) 314, 381, 414
DpnII GATC 3 cut(s) 312, 379, 412
EaeI YGGCCR 4 cut(s) 17, 111, 134, 267
EciI GGCGGA 1 cut(s) 213
Eco130I CCWWGG 1 cut(s) 146
Eco31I GGTCTC 2 cut(s) 63, 106
Eco47I GGWCC 3 cut(s) 221, 245, 451
Eco88I CYCGRG 1 cut(s) 235
EcoO109I RGGNCCY 1 cut(s) 451
EcoT14I CCWWGG 1 cut(s) 146
ErhI CCWWGG 1 cut(s) 146
Esp3I CGTCTC 2 cut(s) 291, 341
FaeI CATG 4 cut(s) 18, 319, 331, 443
FaiI YATR 9 cut(s) 16, 93, 133, 289, 317, 329, 441, 472, 554
FaqI GGGAC 2 cut(s) 141, 464
FatI CATG 4 cut(s) 14, 315, 327, 439
FauI CCCGC 4 cut(s) 369, 382, 473, 521
FblI GTMKAC 2 cut(s) 306, 543
Fnu4HI GCNGC 8 cut(s) 111, 137, 181, 261, 264, 267, 325, 517
FokI GGATG 2 cut(s) 185, 212
Fsp4HI GCNGC 8 cut(s) 111, 137, 181, 261, 264, 267, 325, 517
FspBI CTAG 1 cut(s) 87
GlaI GCGC 2 cut(s) 189, 332
GluI GCNGC 8 cut(s) 111, 137, 181, 261, 264, 267, 325, 517
HaeIII GGCC 6 cut(s) 19, 113, 136, 145, 269, 512
HapII CCGG 2 cut(s) 219, 276
HgaI GACGC 1 cut(s) 317
HhaI GCGC 2 cut(s) 190, 333
Hin1I GRCGYC 1 cut(s) 300
Hin1II CATG 4 cut(s) 18, 319, 331, 443
Hin6I GCGC 2 cut(s) 188, 331
HinP1I GCGC 2 cut(s) 188, 331
HincII GTYRAC 3 cut(s) 61, 307, 544
HindII GTYRAC 3 cut(s) 61, 307, 544
HinfI GANTC 1 cut(s) 233
HpaI GTTAAC 1 cut(s) 61
HpaII CCGG 2 cut(s) 219, 276
HphI GGTGA 1 cut(s) 476
Hpy166II GTNNAC 6 cut(s) 61, 245, 307, 395, 467, 544
Hpy188I TCNGA 1 cut(s) 199
Hpy188III TCNNGA 2 cut(s) 419, 449
Hpy8I GTNNAC 6 cut(s) 61, 245, 307, 395, 467, 544
Hpy99I CGWCG 5 cut(s) 305, 308, 311, 529, 545
HpyAV CCTTC 1 cut(s) 416
HpyCH4III ACNGT 2 cut(s) 210, 249
HpyCH4IV ACGT 2 cut(s) 300, 527
HpyCH4V TGCA 3 cut(s) 14, 395, 531
HpyF10VI GCNNNNNNNGC 6 cut(s) 142, 167, 266, 272, 330, 339
HpyF3I CTNAG 5 cut(s) 25, 74, 121, 140, 476
HpySE526I ACGT 2 cut(s) 300, 527
Hsp92I GRCGYC 1 cut(s) 300
Hsp92II CATG 4 cut(s) 18, 319, 331, 443
HspAI GCGC 2 cut(s) 188, 331
KflI GGGWCCC 1 cut(s) 451
KspAI GTTAAC 1 cut(s) 61
KspI CCGCGG 1 cut(s) 111
Kzo9I GATC 3 cut(s) 312, 379, 412
LmnI GCTCC 2 cut(s) 35, 367
LpnPI CCDG 8 cut(s) 32, 92, 127, 232, 289, 378, 457, 488
Lsp1109I GCAGC 2 cut(s) 336, 528
LweI GCATC 3 cut(s) 175, 361, 511
MaeI CTAG 1 cut(s) 87
MaeII ACGT 2 cut(s) 300, 527
MaeIII GTNAC 2 cut(s) 210, 249
MalI GATC 3 cut(s) 314, 381, 414
MbiI CCGCTC 1 cut(s) 480
MboI GATC 3 cut(s) 312, 379, 412
MboII GAAGA 1 cut(s) 407
MflI RGATCY 1 cut(s) 379
MhlI GDGCHC 2 cut(s) 364, 397
MluCI AATT 1 cut(s) 52
MlyI GAGTC 1 cut(s) 227
MmeI TCCRAC 1 cut(s) 177
MnlI CCTC 8 cut(s) 83, 91, 115, 118, 151, 201, 488, 502
MseI TTAA 2 cut(s) 51, 60
MslI CAYNNNNRTG 1 cut(s) 357
MspA1I CMGCKG 2 cut(s) 110, 170
MspI CCGG 2 cut(s) 219, 276
MspR9I CCNGG 1 cut(s) 277
MvnI CGCG 2 cut(s) 110, 311
MwoI GCNNNNNNNGC 6 cut(s) 142, 167, 266, 272, 330, 339
NciI CCSGG 1 cut(s) 277
NdeII GATC 3 cut(s) 312, 379, 412
NlaIII CATG 4 cut(s) 18, 319, 331, 443
NlaIV GGNNCC 3 cut(s) 381, 452, 453
NmeAIII GCCGAG 2 cut(s) 318, 516
NmuCI GTSAC 1 cut(s) 210
NspI RCATGY 2 cut(s) 331, 443
PaeI GCATGC 2 cut(s) 331, 443
PcsI WCGNNNNNNNCGW 2 cut(s) 355, 533
PflFI GACNNNGTC 1 cut(s) 302
PkrI GCNGC 8 cut(s) 112, 138, 182, 262, 265, 268, 326, 518
PleI GAGTC 1 cut(s) 227
PpsI GAGTC 1 cut(s) 227
PpuMI RGGWCCY 1 cut(s) 451
Psp5II RGGWCCY 1 cut(s) 451
PspN4I GGNNCC 3 cut(s) 381, 452, 453
PspPI GGNCC 4 cut(s) 221, 245, 451, 511
PspPPI RGGWCCY 1 cut(s) 451
PsuI RGATCY 1 cut(s) 379
PsyI GACNNNGTC 1 cut(s) 302
RseI CAYNNNNRTG 1 cut(s) 357
Rsr2I CGGWCCG 1 cut(s) 221
RsrII CGGWCCG 1 cut(s) 221
SacII CCGCGG 1 cut(s) 111
SalI GTCGAC 2 cut(s) 305, 542
SaqAI TTAA 2 cut(s) 51, 60
SatI GCNGC 8 cut(s) 111, 137, 181, 261, 264, 267, 325, 517
Sau3AI GATC 3 cut(s) 312, 379, 412
Sau96I GGNCC 4 cut(s) 221, 245, 451, 511
SchI GAGTC 1 cut(s) 227
ScrFI CCNGG 1 cut(s) 277
SduI GDGCHC 2 cut(s) 364, 397
SetI ASST 7 cut(s) 75, 92, 102, 119, 303, 411, 530
SfaNI GCATC 3 cut(s) 175, 361, 511
SfiI GGCCNNNNNGGCC 1 cut(s) 142
Sfr303I CCGCGG 1 cut(s) 111
SgrBI CCGCGG 1 cut(s) 111
SgrDI CGTCGACG 1 cut(s) 305
SinI GGWCC 3 cut(s) 221, 245, 451
SmiMI CAYNNNNRTG 1 cut(s) 357
SphI GCATGC 2 cut(s) 331, 443
Sse9I AATT 1 cut(s) 52
SspMI CTAG 1 cut(s) 87
StyD4I CCNGG 1 cut(s) 275
StyI CCWWGG 1 cut(s) 146
TaaI ACNGT 2 cut(s) 210, 249
TaiI ACGT 2 cut(s) 303, 530
TaqI TCGA 5 cut(s) 231, 306, 418, 429, 543
TaqII GACCGA 2 cut(s) 183, 419
TasI AATT 1 cut(s) 52
TauI GCSGC 6 cut(s) 113, 139, 183, 263, 266, 269
Tru1I TTAA 2 cut(s) 51, 60
Tru9I TTAA 2 cut(s) 51, 60
TseFI GTSAC 1 cut(s) 210
TseI GCWGC 2 cut(s) 324, 516
Tsp45I GTSAC 1 cut(s) 210
TspGWI ACGGA 2 cut(s) 46, 268
Tth111I GACNNNGTC 1 cut(s) 302
VneI GTGCAC 1 cut(s) 393
VpaK11BI GGWCC 3 cut(s) 221, 245, 451
XceI RCATGY 2 cut(s) 331, 443
XmiI GTMKAC 2 cut(s) 306, 543
XspI CTAG 1 cut(s) 87
ZraI GACGTC 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.