Rroxscaffold_93G00440990

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000093
OG0000104
Physical Location & Seq
Reverse (-)
125169 .. 128214
3046 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_93G00440990.1

Sequence Viewer

Length: 822 bp
ATGTGTGCGAGTCAACGGGTGATTAAACCCGTAAGGCGCAAGGAAGCTAATGTGCGGGATCCCTTTGCGGGTGCACCGCCGACCGACCTTGATCTTCGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATGCTGACGTGCAAATCGACGGCGTGGCTGCTTTGTTGAGCCACGCCAAGGAATCGAGAGCTCCAAGTGGGCCATTTTTGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACAGTCGACTCAGAACTGGGCGGGGGCACTGCCCCTCTTTTTGGACCCAAAGCCTGCTTCGGCGGGCTGATCCGGGCGGAAGACATTGTCAGGACGCTTCCTAACGAATGCGATGCCAAGCCAAGGCTAGGCAATGCCGTGGCTGACAGAGGCTTCCTAGCGAAGGATAATGCAATGCCGAGCCAAGGCTTTGCCAAGACAATGCCAAGGCTTGCTAGTGAGGCTAATGCAATGTCAAGCCAAGGCTTGCCAAGACAATGCCAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

273

Amino Acids

29.16

Weight (kDa)

9.33

Isoelectric Point (pI)

54.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 325
AccBSI CCGCTC 2 cut(s) 159, 486
AccI GTMKAC 1 cut(s) 558
AccII CGCG 3 cut(s) 346, 477, 496
AclWI GGATC 5 cut(s) 53, 66, 373, 386, 616
AcoI YGGCCR 1 cut(s) 502
AgsI TTSAA 1 cut(s) 552
AjiI CACGTC 2 cut(s) 208, 342
AjnI CCWGG 1 cut(s) 289
AjuI GAANNNNNNNTTGG 2 cut(s) 593, 625
AluBI AGCT 3 cut(s) 47, 260, 468
AluI AGCT 3 cut(s) 47, 260, 468
Alw21I GWGCWC 3 cut(s) 76, 262, 336
Alw44I GTGCAC 1 cut(s) 72
AlwI GGATC 5 cut(s) 53, 66, 373, 386, 616
AlwNI CAGNNNCTG 1 cut(s) 325
Ama87I CYCGRG 3 cut(s) 389, 463, 542
AoxI GGCC 3 cut(s) 189, 269, 502
ApaLI GTGCAC 1 cut(s) 72
ApeKI GCWGC 4 cut(s) 195, 227, 405, 468
AspLEI GCGC 1 cut(s) 39
AspS9I GGNCC 6 cut(s) 130, 190, 269, 316, 426, 596
AsuC2I CCSGG 4 cut(s) 506, 543, 544, 626
AsuHPI GGTGA 3 cut(s) 31, 155, 466
AvaI CYCGRG 3 cut(s) 389, 463, 542
AvaII GGWCC 4 cut(s) 130, 316, 426, 596
BaeGI GKGCMC 3 cut(s) 76, 421, 581
BamHI GGATCC 2 cut(s) 58, 378
BanII GRGCYC 1 cut(s) 262
BbsI GAAGAC 1 cut(s) 639
Bbv12I GWGCWC 3 cut(s) 76, 262, 336
BbvI GCAGC 4 cut(s) 207, 214, 392, 455
BccI CCATC 1 cut(s) 134
BceAI ACGGC 3 cut(s) 235, 313, 674
BcgI CGANNNNNNTGC 4 cut(s) 107, 141, 647, 681
BciT130I CCWGG 1 cut(s) 291
BcnI CCSGG 4 cut(s) 506, 543, 544, 626
BfaI CTAG 4 cut(s) 680, 710, 768, 820
BisI GCNGC 7 cut(s) 196, 228, 323, 406, 469, 478, 494
BlpI GCTNAGC 1 cut(s) 301
BlsI GCNGC 7 cut(s) 197, 229, 324, 407, 470, 479, 495
Bme1390I CCNGG 5 cut(s) 291, 506, 543, 544, 626
Bme18I GGWCC 4 cut(s) 130, 316, 426, 596
BmeT110I CYCGRG 3 cut(s) 389, 463, 542
BmgBI CACGTC 2 cut(s) 208, 342
BmgT120I GGNCC 6 cut(s) 130, 190, 269, 316, 426, 596
BmiI GGNNCC 8 cut(s) 60, 131, 132, 317, 380, 427, 428, 598
BmrFI CCNGG 5 cut(s) 291, 506, 543, 544, 626
BmrI ACTGGG 3 cut(s) 424, 526, 578
BmsI GCATC 2 cut(s) 190, 655
BmuI ACTGGG 3 cut(s) 424, 526, 578
BpiI GAAGAC 1 cut(s) 639
Bpu10I CCTNAGC 1 cut(s) 155
Bpu1102I GCTNAGC 1 cut(s) 301
BpuMI CCSGG 4 cut(s) 506, 543, 544, 626
BsaXI ACNNNNNCTCC 2 cut(s) 300, 330
Bse118I RCCGGY 1 cut(s) 500
Bse1I ACTGG 3 cut(s) 430, 521, 573
Bse3DI GCAATG 3 cut(s) 691, 732, 789
BseBI CCWGG 1 cut(s) 291
BseMI GCAATG 3 cut(s) 691, 732, 789
BseMII CTCAG 3 cut(s) 146, 315, 576
BseNI ACTGG 3 cut(s) 430, 521, 573
BseSI GKGCMC 3 cut(s) 76, 421, 581
BseX3I CGGCCG 1 cut(s) 502
BseXI GCAGC 4 cut(s) 207, 214, 392, 455
BseYI CCCAGC 1 cut(s) 414
Bsh1236I CGCG 3 cut(s) 346, 477, 496
Bsh1285I CGRYCG 2 cut(s) 84, 505
BshFI GGCC 3 cut(s) 191, 271, 504
BsiEI CGRYCG 2 cut(s) 84, 505
BsiHKAI GWGCWC 3 cut(s) 76, 262, 336
BsiHKCI CYCGRG 3 cut(s) 389, 463, 542
BsiSI CCGG 6 cut(s) 306, 355, 501, 505, 543, 625
BslFI GGGAC 4 cut(s) 143, 412, 418, 523
BsmFI GGGAC 4 cut(s) 143, 412, 418, 523
BsmI GAATGC 1 cut(s) 665
BsnI GGCC 3 cut(s) 191, 271, 504
BsoBI CYCGRG 3 cut(s) 389, 463, 542
Bsp1286I GDGCHC 5 cut(s) 76, 262, 336, 421, 581
Bsp143I GATC 4 cut(s) 58, 91, 378, 621
Bsp1720I GCTNAGC 1 cut(s) 301
BspANI GGCC 3 cut(s) 191, 271, 504
BspCNI CTCAG 3 cut(s) 147, 314, 575
BspFNI CGCG 3 cut(s) 346, 477, 496
BspLI GGNNCC 8 cut(s) 60, 131, 132, 317, 380, 427, 428, 598
BspPI GGATC 5 cut(s) 53, 66, 373, 386, 616
BspQI GCTCTTC 1 cut(s) 324
BsrBI CCGCTC 2 cut(s) 159, 486
BsrDI GCAATG 3 cut(s) 691, 732, 789
BsrFI RCCGGY 1 cut(s) 500
BsrI ACTGG 3 cut(s) 430, 521, 573
BssAI RCCGGY 1 cut(s) 500
BssMI GATC 4 cut(s) 58, 91, 378, 621
BssT1I CCWWGG 6 cut(s) 246, 674, 736, 758, 793, 814
Bst2UI CCWGG 1 cut(s) 291
Bst4CI ACNGT 1 cut(s) 556
Bst6I CTCTTC 1 cut(s) 324
BstC8I GCNNGC 9 cut(s) 120, 193, 282, 498, 502, 607, 617, 765, 800
BstDEI CTNAG 3 cut(s) 155, 301, 562
BstDSI CCRYGG 2 cut(s) 475, 690
BstENI CCTNNNNNAGG 1 cut(s) 713
BstFNI CGCG 3 cut(s) 346, 477, 496
BstHHI GCGC 1 cut(s) 39
BstKTI GATC 4 cut(s) 61, 94, 381, 624
BstMBI GATC 4 cut(s) 58, 91, 378, 621
BstMCI CGRYCG 2 cut(s) 84, 505
BstMWI GCNNNNNNNGC 8 cut(s) 277, 331, 411, 468, 474, 477, 483, 773
BstNI CCWGG 1 cut(s) 291
BstNSI RCATGY 1 cut(s) 122
BstSCI CCNGG 5 cut(s) 289, 504, 541, 542, 624
BstSLI GKGCMC 3 cut(s) 76, 421, 581
BstUI CGCG 3 cut(s) 346, 477, 496
BstV1I GCAGC 4 cut(s) 207, 214, 392, 455
BstV2I GAAGAC 1 cut(s) 639
BstX2I RGATCY 2 cut(s) 58, 378
BstYI RGATCY 2 cut(s) 58, 378
BstZI CGGCCG 1 cut(s) 502
BsuRI GGCC 3 cut(s) 191, 271, 504
BtgI CCRYGG 2 cut(s) 475, 690
BtgZI GCGATG 2 cut(s) 213, 678
BtrI CACGTC 2 cut(s) 208, 342
BtsI GCAGTG 1 cut(s) 579
BtsIMutI CAGTG 1 cut(s) 579
Cac8I GCNNGC 9 cut(s) 120, 193, 282, 498, 502, 607, 617, 765, 800
CaiI CAGNNNCTG 1 cut(s) 325
CfoI GCGC 1 cut(s) 39
Cfr10I RCCGGY 1 cut(s) 500
Cfr13I GGNCC 6 cut(s) 130, 190, 269, 316, 426, 596
Cfr42I CCGCGG 1 cut(s) 478
Cfr9I CCCGGG 1 cut(s) 542
CseI GACGC 1 cut(s) 655
CviAII CATG 1 cut(s) 119
DdeI CTNAG 3 cut(s) 155, 301, 562
DpnI GATC 4 cut(s) 60, 93, 380, 623
DpnII GATC 4 cut(s) 58, 91, 378, 621
EaeI YGGCCR 1 cut(s) 502
EagI CGGCCG 1 cut(s) 502
Eam1104I CTCTTC 1 cut(s) 324
EarI CTCTTC 1 cut(s) 324
EciI GGCGGA 1 cut(s) 644
Ecl136II GAGCTC 1 cut(s) 260
EclXI CGGCCG 1 cut(s) 502
Eco130I CCWWGG 6 cut(s) 246, 674, 736, 758, 793, 814
Eco24I GRGCYC 1 cut(s) 262
Eco47I GGWCC 4 cut(s) 130, 316, 426, 596
Eco52I CGGCCG 1 cut(s) 502
Eco53kI GAGCTC 1 cut(s) 260
Eco88I CYCGRG 3 cut(s) 389, 463, 542
EcoICRI GAGCTC 1 cut(s) 260
EcoNI CCTNNNNNAGG 1 cut(s) 713
EcoO109I RGGNCCY 2 cut(s) 130, 426
EcoRII CCWGG 1 cut(s) 289
EcoT14I CCWWGG 6 cut(s) 246, 674, 736, 758, 793, 814
EcoT38I GRGCYC 1 cut(s) 262
ErhI CCWWGG 6 cut(s) 246, 674, 736, 758, 793, 814
FaeI CATG 1 cut(s) 122
FaiI YATR 2 cut(s) 120, 151
FaqI GGGAC 4 cut(s) 143, 412, 418, 523
FatI CATG 1 cut(s) 118
FauI CCCGC 7 cut(s) 48, 61, 152, 200, 479, 566, 608
FblI GTMKAC 1 cut(s) 558
Fnu4HI GCNGC 7 cut(s) 196, 228, 323, 406, 469, 478, 494
FriOI GRGCYC 1 cut(s) 262
Fsp4HI GCNGC 7 cut(s) 196, 228, 323, 406, 469, 478, 494
FspBI CTAG 4 cut(s) 680, 710, 768, 820
GlaI GCGC 1 cut(s) 38
GluI GCNGC 7 cut(s) 196, 228, 323, 406, 469, 478, 494
GsaI CCCAGC 1 cut(s) 418
HaeIII GGCC 3 cut(s) 191, 271, 504
HapII CCGG 6 cut(s) 306, 355, 501, 505, 543, 625
HgaI GACGC 1 cut(s) 655
HhaI GCGC 1 cut(s) 39
Hin1II CATG 1 cut(s) 122
Hin6I GCGC 1 cut(s) 37
HinP1I GCGC 1 cut(s) 37
HincII GTYRAC 2 cut(s) 14, 559
HindII GTYRAC 2 cut(s) 14, 559
HinfI GANTC 3 cut(s) 10, 251, 560
HpaII CCGG 6 cut(s) 306, 355, 501, 505, 543, 625
HphI GGTGA 3 cut(s) 31, 155, 466
Hpy166II GTNNAC 5 cut(s) 14, 74, 146, 457, 559
Hpy188I TCNGA 1 cut(s) 565
Hpy188III TCNNGA 6 cut(s) 98, 128, 255, 391, 435, 643
Hpy8I GTNNAC 5 cut(s) 14, 74, 146, 457, 559
Hpy99I CGWCG 3 cut(s) 221, 346, 447
HpyAV CCTTC 3 cut(s) 95, 538, 709
HpyCH4III ACNGT 1 cut(s) 556
HpyCH4IV ACGT 2 cut(s) 207, 341
HpyCH4V TGCA 4 cut(s) 74, 211, 725, 782
HpyF10VI GCNNNNNNNGC 8 cut(s) 277, 331, 411, 468, 474, 477, 483, 773
HpyF3I CTNAG 3 cut(s) 155, 301, 562
HpySE526I ACGT 2 cut(s) 207, 341
Hsp92II CATG 1 cut(s) 122
HspAI GCGC 1 cut(s) 37
KflI GGGWCCC 2 cut(s) 130, 426
KroI GCCGGC 1 cut(s) 500
KroNI GCCGGC 1 cut(s) 502
KspI CCGCGG 1 cut(s) 478
Kzo9I GATC 4 cut(s) 58, 91, 378, 621
LguI GCTCTTC 1 cut(s) 324
LmnI GCTCC 2 cut(s) 265, 530
Lsp1109I GCAGC 4 cut(s) 207, 214, 392, 455
LweI GCATC 2 cut(s) 190, 655
MaeI CTAG 4 cut(s) 680, 710, 768, 820
MaeII ACGT 2 cut(s) 207, 341
MaeIII GTNAC 1 cut(s) 383
MalI GATC 4 cut(s) 60, 93, 380, 623
MbiI CCGCTC 2 cut(s) 159, 486
MboI GATC 4 cut(s) 58, 91, 378, 621
MboII GAAGA 3 cut(s) 86, 341, 644
MflI RGATCY 2 cut(s) 58, 378
MhlI GDGCHC 5 cut(s) 76, 262, 336, 421, 581
MlyI GAGTC 2 cut(s) 19, 554
MnlI CCTC 8 cut(s) 166, 181, 302, 398, 403, 597, 695, 766
MroNI GCCGGC 1 cut(s) 500
MseI TTAA 1 cut(s) 24
MspA1I CMGCKG 2 cut(s) 322, 477
MspI CCGG 6 cut(s) 306, 355, 501, 505, 543, 625
MspR9I CCNGG 5 cut(s) 291, 506, 543, 544, 626
Mva1269I GAATGC 1 cut(s) 665
MvaI CCWGG 1 cut(s) 291
MvnI CGCG 3 cut(s) 346, 477, 496
MwoI GCNNNNNNNGC 8 cut(s) 277, 331, 411, 468, 474, 477, 483, 773
NaeI GCCGGC 1 cut(s) 502
NciI CCSGG 4 cut(s) 506, 543, 544, 626
NdeII GATC 4 cut(s) 58, 91, 378, 621
NgoMIV GCCGGC 1 cut(s) 500
NlaIII CATG 1 cut(s) 122
NlaIV GGNNCC 8 cut(s) 60, 131, 132, 317, 380, 427, 428, 598
NmeAIII GCCGAG 1 cut(s) 756
NspI RCATGY 1 cut(s) 122
PaeI GCATGC 1 cut(s) 122
PaeR7I CTCGAG 1 cut(s) 463
PciSI GCTCTTC 1 cut(s) 324
PcsI WCGNNNNNNNCGW 1 cut(s) 213
PctI GAATGC 1 cut(s) 665
PdiI GCCGGC 1 cut(s) 502
PfeI GAWTC 1 cut(s) 251
PflFI GACNNNGTC 1 cut(s) 638
PflMI CCANNNNNTGG 1 cut(s) 325
PkrI GCNGC 7 cut(s) 197, 229, 324, 407, 470, 479, 495
PleI GAGTC 2 cut(s) 18, 554
PpsI GAGTC 2 cut(s) 18, 554
PpuMI RGGWCCY 2 cut(s) 130, 426
Psp124BI GAGCTC 1 cut(s) 262
Psp5II RGGWCCY 2 cut(s) 130, 426
Psp6I CCWGG 1 cut(s) 289
PspFI CCCAGC 1 cut(s) 414
PspGI CCWGG 1 cut(s) 289
PspN4I GGNNCC 8 cut(s) 60, 131, 132, 317, 380, 427, 428, 598
PspPI GGNCC 6 cut(s) 130, 190, 269, 316, 426, 596
PspPPI RGGWCCY 2 cut(s) 130, 426
PspXI VCTCGAGB 1 cut(s) 463
PstNI CAGNNNCTG 1 cut(s) 325
PsuI RGATCY 2 cut(s) 58, 378
PsyI GACNNNGTC 1 cut(s) 638
SacI GAGCTC 1 cut(s) 262
SacII CCGCGG 1 cut(s) 478
SalI GTCGAC 1 cut(s) 557
SapI GCTCTTC 1 cut(s) 324
SaqAI TTAA 1 cut(s) 24
SatI GCNGC 7 cut(s) 196, 228, 323, 406, 469, 478, 494
Sau3AI GATC 4 cut(s) 58, 91, 378, 621
Sau96I GGNCC 6 cut(s) 130, 190, 269, 316, 426, 596
SchI GAGTC 2 cut(s) 19, 554
ScrFI CCNGG 5 cut(s) 291, 506, 543, 544, 626
SduI GDGCHC 5 cut(s) 76, 262, 336, 421, 581
SetI ASST 8 cut(s) 49, 90, 210, 262, 313, 344, 390, 470
SfaNI GCATC 2 cut(s) 190, 655
Sfr274I CTCGAG 1 cut(s) 463
Sfr303I CCGCGG 1 cut(s) 478
SgrBI CCGCGG 1 cut(s) 478
SinI GGWCC 4 cut(s) 130, 316, 426, 596
SlaI CTCGAG 1 cut(s) 463
SmaI CCCGGG 1 cut(s) 544
SmlI CTYRAG 1 cut(s) 463
SmoI CTYRAG 1 cut(s) 463
SphI GCATGC 1 cut(s) 122
SspMI CTAG 4 cut(s) 680, 710, 768, 820
SstI GAGCTC 1 cut(s) 262
StyD4I CCNGG 5 cut(s) 289, 504, 541, 542, 624
StyI CCWWGG 6 cut(s) 246, 674, 736, 758, 793, 814
TaaI ACNGT 1 cut(s) 556
TaiI ACGT 2 cut(s) 210, 344
TaqI TCGA 6 cut(s) 97, 108, 216, 254, 464, 558
TaqII GACCGA 1 cut(s) 98
TauI GCSGC 3 cut(s) 325, 480, 496
TfiI GAWTC 1 cut(s) 251
Tru1I TTAA 1 cut(s) 24
Tru9I TTAA 1 cut(s) 24
TscAI CASTG 1 cut(s) 586
TseI GCWGC 4 cut(s) 195, 227, 405, 468
TspGWI ACGGA 2 cut(s) 371, 527
TspMI CCCGGG 1 cut(s) 542
TspRI CASTG 1 cut(s) 586
Tth111I GACNNNGTC 1 cut(s) 638
Van91I CCANNNNNTGG 1 cut(s) 325
VneI GTGCAC 1 cut(s) 72
VpaK11BI GGWCC 4 cut(s) 130, 316, 426, 596
XagI CCTNNNNNAGG 1 cut(s) 713
XceI RCATGY 1 cut(s) 122
XhoI CTCGAG 1 cut(s) 463
XmaI CCCGGG 1 cut(s) 542
XmiI GTMKAC 1 cut(s) 558
XspI CTAG 4 cut(s) 680, 710, 768, 820
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.