Rroxscaffold_39G00448260

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000039
OG0000104
Physical Location & Seq
Reverse (-)
62308 .. 63106
799 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_39G00448260.1

Sequence Viewer

Length: 498 bp
ATGCGGCGTCGTAAGGCGTCGAATTGTAGTACGGAGAAGCGTCCTCGAGAGGCGGACCGGGAACAAGTCCCCTGGAAGGGGCGCCATAGAGGGGAAGCGGATGGGGGCGGCGATGCGCCTCGGTCGGATGTGGAACGGTCACAAGCCGGTCCGCCACTCGACTCGGGGCGTGGACCGTTACGGATTGCGGCGGCGGCCAAAGCCGGGCTGTTGATATGCCGTGGAGACGTCGTCGACGCGATCATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCTGGAAGCTAATGTGCGGGATCCCTTTGCGGGTGCACCGCCGACCGACCTTGATCTTCGAGAAGGGTTCGAGTGTGAGCATGCTGTCGGGACCCGAAAGATGGTGAACTATGCTGAGCGGGGCGAAGCCGGAGGAAACTCGGTGGAGGCCCGCAGCGATGCGACGTGCAAATCGTTCGTCGACTTGGGTATAGGGGCGAAAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

165

Amino Acids

17.73

Weight (kDa)

9.07

Isoelectric Point (pI)

44.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 231
AccB1I GGYRCC 1 cut(s) 81
AccBSI CCGCTC 1 cut(s) 409
AccI GTMKAC 2 cut(s) 234, 471
AccII CGCG 1 cut(s) 239
AclWI GGATC 2 cut(s) 305, 318
AcoI YGGCCR 1 cut(s) 195
AcyI GRCGYC 4 cut(s) 7, 17, 82, 228
AfaI GTAC 1 cut(s) 31
AfiI CCNNNNNNNGG 7 cut(s) 76, 77, 78, 91, 204, 320, 391
AjiI CACGTC 1 cut(s) 456
AjnI CCWGG 1 cut(s) 71
AluBI AGCT 1 cut(s) 299
AluI AGCT 1 cut(s) 299
Alw21I GWGCWC 2 cut(s) 292, 328
Alw26I GTCTC 2 cut(s) 219, 269
Alw44I GTGCAC 1 cut(s) 324
AlwI GGATC 2 cut(s) 305, 318
Ama87I CYCGRG 2 cut(s) 45, 163
AoxI GGCC 2 cut(s) 195, 438
ApaLI GTGCAC 1 cut(s) 324
ApeKI GCWGC 2 cut(s) 252, 444
ArsI GACNNNNNNTTYG 2 cut(s) 453, 485
AspLEI GCGC 3 cut(s) 84, 118, 261
AspS9I GGNCC 5 cut(s) 55, 149, 173, 381, 439
AsuC2I CCSGG 2 cut(s) 59, 205
AsuHPI GGTGA 1 cut(s) 406
AvaI CYCGRG 2 cut(s) 45, 163
AvaII GGWCC 4 cut(s) 55, 149, 173, 381
BaeGI GKGCMC 1 cut(s) 328
BamHI GGATCC 1 cut(s) 310
BanI GGYRCC 1 cut(s) 81
Bbv12I GWGCWC 2 cut(s) 292, 328
BbvI GCAGC 2 cut(s) 264, 456
BccI CCATC 2 cut(s) 95, 385
BceAI ACGGC 2 cut(s) 204, 246
BcgI CGANNNNNNTGC 2 cut(s) 448, 482
BciT130I CCWGG 1 cut(s) 73
BcnI CCSGG 2 cut(s) 59, 205
BcoDI GTCTC 2 cut(s) 219, 269
BfoI RGCGCY 1 cut(s) 85
BglI GCCNNNNNGGC 1 cut(s) 267
BisI GCNGC 7 cut(s) 5, 109, 189, 192, 195, 253, 445
BlpI GCTNAGC 1 cut(s) 405
BlsI GCNGC 7 cut(s) 6, 110, 190, 193, 196, 254, 446
Bme1390I CCNGG 3 cut(s) 59, 73, 205
Bme18I GGWCC 4 cut(s) 55, 149, 173, 381
BmeT110I CYCGRG 2 cut(s) 45, 163
BmgBI CACGTC 1 cut(s) 456
BmgT120I GGNCC 5 cut(s) 55, 149, 173, 381, 439
BmiI GGNNCC 4 cut(s) 83, 312, 382, 383
BmrFI CCNGG 3 cut(s) 59, 73, 205
BmsI GCATC 3 cut(s) 103, 289, 439
Bpu1102I GCTNAGC 1 cut(s) 405
BpuMI CCSGG 2 cut(s) 59, 205
BsaHI GRCGYC 4 cut(s) 7, 17, 82, 228
BsaJI CCNNGG 3 cut(s) 71, 119, 220
BsaXI ACNNNNNCTCC 2 cut(s) 216, 246
Bsc4I CCNNNNNNNGG 7 cut(s) 76, 77, 78, 91, 204, 320, 391
Bse118I RCCGGY 1 cut(s) 146
BseBI CCWGG 1 cut(s) 73
BseDI CCNNGG 3 cut(s) 71, 119, 220
BseGI GGATG 2 cut(s) 106, 133
BseLI CCNNNNNNNGG 7 cut(s) 76, 77, 78, 91, 204, 320, 391
BseMII CTCAG 1 cut(s) 396
BseSI GKGCMC 1 cut(s) 328
BseXI GCAGC 2 cut(s) 264, 456
Bsh1236I CGCG 1 cut(s) 239
Bsh1285I CGRYCG 2 cut(s) 125, 336
BshFI GGCC 2 cut(s) 197, 440
BshNI GGYRCC 1 cut(s) 81
BsiEI CGRYCG 2 cut(s) 125, 336
BsiHKAI GWGCWC 2 cut(s) 292, 328
BsiHKCI CYCGRG 2 cut(s) 45, 163
BsiSI CCGG 4 cut(s) 58, 147, 204, 420
BslFI GGGAC 2 cut(s) 53, 394
BslI CCNNNNNNNGG 7 cut(s) 76, 77, 78, 91, 204, 320, 391
BsmAI GTCTC 2 cut(s) 219, 269
BsmBI CGTCTC 2 cut(s) 219, 269
BsmFI GGGAC 2 cut(s) 53, 394
BsnI GGCC 2 cut(s) 197, 440
BsoBI CYCGRG 2 cut(s) 45, 163
Bsp1286I GDGCHC 2 cut(s) 292, 328
Bsp143I GATC 3 cut(s) 240, 310, 343
Bsp1720I GCTNAGC 1 cut(s) 405
BspANI GGCC 2 cut(s) 197, 440
BspCNI CTCAG 1 cut(s) 397
BspFNI CGCG 1 cut(s) 239
BspLI GGNNCC 4 cut(s) 83, 312, 382, 383
BspPI GGATC 2 cut(s) 305, 318
BspT107I GGYRCC 1 cut(s) 81
BsrBI CCGCTC 1 cut(s) 409
BsrFI RCCGGY 1 cut(s) 146
BssAI RCCGGY 1 cut(s) 146
BssECI CCNNGG 3 cut(s) 71, 119, 220
BssMI GATC 3 cut(s) 240, 310, 343
BssNI GRCGYC 4 cut(s) 7, 17, 82, 228
Bst2UI CCWGG 1 cut(s) 73
Bst4CI ACNGT 2 cut(s) 138, 177
BstACI GRCGYC 4 cut(s) 7, 17, 82, 228
BstC8I GCNNGC 5 cut(s) 257, 272, 288, 372, 442
BstDEI CTNAG 1 cut(s) 405
BstDSI CCRYGG 1 cut(s) 220
BstF5I GGATG 2 cut(s) 106, 133
BstFNI CGCG 1 cut(s) 239
BstH2I RGCGCY 1 cut(s) 85
BstHHI GCGC 3 cut(s) 84, 118, 261
BstKTI GATC 3 cut(s) 243, 313, 346
BstMAI GTCTC 2 cut(s) 219, 269
BstMBI GATC 3 cut(s) 240, 310, 343
BstMCI CGRYCG 2 cut(s) 125, 336
BstMWI GCNNNNNNNGC 5 cut(s) 194, 200, 258, 267, 296
BstNI CCWGG 1 cut(s) 73
BstNSI RCATGY 2 cut(s) 259, 374
BstSCI CCNGG 3 cut(s) 57, 71, 203
BstSLI GKGCMC 1 cut(s) 328
BstUI CGCG 1 cut(s) 239
BstV1I GCAGC 2 cut(s) 264, 456
BstX2I RGATCY 1 cut(s) 310
BstYI RGATCY 1 cut(s) 310
BsuRI GGCC 2 cut(s) 197, 440
BtgI CCRYGG 1 cut(s) 220
BtgZI GCGATG 2 cut(s) 126, 462
BtrI CACGTC 1 cut(s) 456
BtsCI GGATG 2 cut(s) 106, 133
Cac8I GCNNGC 5 cut(s) 257, 272, 288, 372, 442
CfoI GCGC 3 cut(s) 84, 118, 261
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 5 cut(s) 55, 149, 173, 381, 439
CpoI CGGWCCG 2 cut(s) 55, 149
CseI GACGC 3 cut(s) 6, 29, 245
Csp6I GTAC 1 cut(s) 30
CspI CGGWCCG 2 cut(s) 55, 149
CviAII CATG 3 cut(s) 244, 256, 371
CviJI RGCY 7 cut(s) 146, 197, 203, 208, 299, 419, 440
CviKI_1 RGCY 7 cut(s) 146, 197, 203, 208, 299, 419, 440
CviQI GTAC 1 cut(s) 30
DdeI CTNAG 1 cut(s) 405
DinI GGCGCC 1 cut(s) 83
DpnI GATC 3 cut(s) 242, 312, 345
DpnII GATC 3 cut(s) 240, 310, 343
EaeI YGGCCR 1 cut(s) 195
EciI GGCGGA 2 cut(s) 68, 141
Eco47I GGWCC 4 cut(s) 55, 149, 173, 381
Eco88I CYCGRG 2 cut(s) 45, 163
EcoO109I RGGNCCY 1 cut(s) 381
EcoRII CCWGG 1 cut(s) 71
EgeI GGCGCC 1 cut(s) 83
EheI GGCGCC 1 cut(s) 83
Esp3I CGTCTC 2 cut(s) 219, 269
FaeI CATG 3 cut(s) 247, 259, 374
FaiI YATR 7 cut(s) 87, 217, 245, 257, 372, 402, 482
FaqI GGGAC 2 cut(s) 53, 394
FatI CATG 3 cut(s) 243, 255, 370
FauI CCCGC 4 cut(s) 300, 313, 402, 449
FblI GTMKAC 2 cut(s) 234, 471
Fnu4HI GCNGC 7 cut(s) 5, 109, 189, 192, 195, 253, 445
FokI GGATG 2 cut(s) 113, 140
Fsp4HI GCNGC 7 cut(s) 5, 109, 189, 192, 195, 253, 445
GlaI GCGC 3 cut(s) 83, 117, 260
GluI GCNGC 7 cut(s) 5, 109, 189, 192, 195, 253, 445
HaeII RGCGCY 1 cut(s) 85
HaeIII GGCC 2 cut(s) 197, 440
HapII CCGG 4 cut(s) 58, 147, 204, 420
HgaI GACGC 3 cut(s) 6, 29, 245
HhaI GCGC 3 cut(s) 84, 118, 261
Hin1I GRCGYC 4 cut(s) 7, 17, 82, 228
Hin1II CATG 3 cut(s) 247, 259, 374
Hin6I GCGC 3 cut(s) 82, 116, 259
HinP1I GCGC 3 cut(s) 82, 116, 259
HincII GTYRAC 2 cut(s) 235, 472
HindII GTYRAC 2 cut(s) 235, 472
HinfI GANTC 1 cut(s) 161
HpaII CCGG 4 cut(s) 58, 147, 204, 420
HphI GGTGA 1 cut(s) 406
Hpy166II GTNNAC 5 cut(s) 173, 235, 326, 397, 472
Hpy188I TCNGA 1 cut(s) 127
Hpy188III TCNNGA 4 cut(s) 47, 293, 350, 379
Hpy8I GTNNAC 5 cut(s) 173, 235, 326, 397, 472
Hpy99I CGWCG 7 cut(s) 12, 22, 233, 236, 239, 457, 473
HpyAV CCTTC 2 cut(s) 70, 347
HpyCH4III ACNGT 2 cut(s) 138, 177
HpyCH4IV ACGT 2 cut(s) 228, 455
HpyCH4V TGCA 2 cut(s) 326, 459
HpyF10VI GCNNNNNNNGC 5 cut(s) 194, 200, 258, 267, 296
HpyF3I CTNAG 1 cut(s) 405
HpySE526I ACGT 2 cut(s) 228, 455
Hsp92I GRCGYC 4 cut(s) 7, 17, 82, 228
Hsp92II CATG 3 cut(s) 247, 259, 374
HspAI GCGC 3 cut(s) 82, 116, 259
KasI GGCGCC 1 cut(s) 81
KflI GGGWCCC 1 cut(s) 381
Kzo9I GATC 3 cut(s) 240, 310, 343
LpnPI CCDG 7 cut(s) 58, 71, 85, 160, 217, 278, 433
Lsp1109I GCAGC 2 cut(s) 264, 456
LweI GCATC 3 cut(s) 103, 289, 439
MaeII ACGT 2 cut(s) 228, 455
MaeIII GTNAC 2 cut(s) 138, 177
MalI GATC 3 cut(s) 242, 312, 345
MbiI CCGCTC 1 cut(s) 409
MboI GATC 3 cut(s) 240, 310, 343
MboII GAAGA 1 cut(s) 338
MflI RGATCY 1 cut(s) 310
MhlI GDGCHC 2 cut(s) 292, 328
MluCI AATT 1 cut(s) 22
Mly113I GGCGCC 1 cut(s) 82
MlyI GAGTC 1 cut(s) 155
MmeI TCCRAC 1 cut(s) 105
MnlI CCTC 6 cut(s) 43, 54, 83, 129, 416, 430
MslI CAYNNNNRTG 1 cut(s) 285
MspI CCGG 4 cut(s) 58, 147, 204, 420
MspR9I CCNGG 3 cut(s) 59, 73, 205
MvaI CCWGG 1 cut(s) 73
MvnI CGCG 1 cut(s) 239
MwoI GCNNNNNNNGC 5 cut(s) 194, 200, 258, 267, 296
NarI GGCGCC 1 cut(s) 82
NciI CCSGG 2 cut(s) 59, 205
NdeII GATC 3 cut(s) 240, 310, 343
NlaIII CATG 3 cut(s) 247, 259, 374
NlaIV GGNNCC 4 cut(s) 83, 312, 382, 383
NmeAIII GCCGAG 1 cut(s) 246
NmuCI GTSAC 1 cut(s) 138
NspI RCATGY 2 cut(s) 259, 374
PaeI GCATGC 2 cut(s) 259, 374
PaeR7I CTCGAG 1 cut(s) 45
PcsI WCGNNNNNNNCGW 2 cut(s) 283, 461
PflFI GACNNNGTC 1 cut(s) 230
PkrI GCNGC 7 cut(s) 6, 110, 190, 193, 196, 254, 446
PleI GAGTC 1 cut(s) 155
PluTI GGCGCC 1 cut(s) 85
PpsI GAGTC 1 cut(s) 155
PpuMI RGGWCCY 1 cut(s) 381
Psp5II RGGWCCY 1 cut(s) 381
Psp6I CCWGG 1 cut(s) 71
PspGI CCWGG 1 cut(s) 71
PspN4I GGNNCC 4 cut(s) 83, 312, 382, 383
PspPI GGNCC 5 cut(s) 55, 149, 173, 381, 439
PspPPI RGGWCCY 1 cut(s) 381
PsuI RGATCY 1 cut(s) 310
PsyI GACNNNGTC 1 cut(s) 230
RsaI GTAC 1 cut(s) 31
RsaNI GTAC 1 cut(s) 30
RseI CAYNNNNRTG 1 cut(s) 285
Rsr2I CGGWCCG 2 cut(s) 55, 149
RsrII CGGWCCG 2 cut(s) 55, 149
SalI GTCGAC 2 cut(s) 233, 470
SatI GCNGC 7 cut(s) 5, 109, 189, 192, 195, 253, 445
Sau3AI GATC 3 cut(s) 240, 310, 343
Sau96I GGNCC 5 cut(s) 55, 149, 173, 381, 439
SchI GAGTC 1 cut(s) 155
ScrFI CCNGG 3 cut(s) 59, 73, 205
SduI GDGCHC 2 cut(s) 292, 328
SetI ASST 4 cut(s) 231, 301, 342, 458
SfaNI GCATC 3 cut(s) 103, 289, 439
SfoI GGCGCC 1 cut(s) 83
Sfr274I CTCGAG 1 cut(s) 45
SgrDI CGTCGACG 1 cut(s) 233
SinI GGWCC 4 cut(s) 55, 149, 173, 381
SlaI CTCGAG 1 cut(s) 45
SmiMI CAYNNNNRTG 1 cut(s) 285
SmlI CTYRAG 1 cut(s) 45
SmoI CTYRAG 1 cut(s) 45
SphI GCATGC 2 cut(s) 259, 374
Sse9I AATT 1 cut(s) 22
SspDI GGCGCC 1 cut(s) 81
StyD4I CCNGG 3 cut(s) 57, 71, 203
TaaI ACNGT 2 cut(s) 138, 177
TaiI ACGT 2 cut(s) 231, 458
TaqI TCGA 7 cut(s) 20, 46, 159, 234, 349, 360, 471
TaqII GACCGA 2 cut(s) 111, 350
TasI AATT 1 cut(s) 22
TauI GCSGC 5 cut(s) 7, 111, 191, 194, 197
TseFI GTSAC 1 cut(s) 138
TseI GCWGC 2 cut(s) 252, 444
Tsp45I GTSAC 1 cut(s) 138
TspGWI ACGGA 2 cut(s) 47, 196
Tth111I GACNNNGTC 1 cut(s) 230
VneI GTGCAC 1 cut(s) 324
VpaK11BI GGWCC 4 cut(s) 55, 149, 173, 381
XceI RCATGY 2 cut(s) 259, 374
XhoI CTCGAG 1 cut(s) 45
XmiI GTMKAC 2 cut(s) 234, 471
ZraI GACGTC 1 cut(s) 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.