Rroxscaffold_29G00441760

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000029
OG0000104
Physical Location & Seq
Forward (+)
81361 .. 83283
1923 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_29G00441760.1

Sequence Viewer

Length: 789 bp
ATGGCGCTTAAGCGCGTGACCTATACCCGGCCGTCGGGGCAAGTGCCGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCCGCAAAACCGGGGCGTGAGCCCGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGCCTGCCCACCCCGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGTCGTACTCATAACCGCATCGGTCTCCAAGGTGAACAGCCTCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCCGAGGGCCGGGCACGGGGTCCCGGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCCGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACCGGGAACGCTCCTTCGGGGGCTTTCCCCGGCGTTCAACGTCGACTCGAACTGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCGCGGGCGCGAAGCTACCGTGCGCCGGATTATGACCGAACGCCTCTAAGTCGAATCCGGCTAGAAGCGACGCATGCGCCCGCCGTCCGATTGCCGACCCGCAGCAGGGGCCCTAGGCCCCCAAAGGCACGTGTCGTTGGTGAAGCCCTCACAGCAGACAAGCTGCGAGGGCCGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

262

Amino Acids

28.28

Weight (kDa)

11.85

Isoelectric Point (pI)

61.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 130
AccB7I CCANNNNNTGG 1 cut(s) 178
AccBSI CCGCTC 2 cut(s) 109, 451
AccI GTMKAC 1 cut(s) 522
AccII CGCG 8 cut(s) 15, 70, 199, 442, 461, 595, 613, 619
AccIII TCCGGA 1 cut(s) 234
AclWI GGATC 2 cut(s) 339, 352
AcoI YGGCCR 3 cut(s) 29, 110, 467
AcvI CACGTG 1 cut(s) 740
AfaI GTAC 2 cut(s) 267, 559
AflII CTTAAG 1 cut(s) 8
AflIII ACRYGT 1 cut(s) 739
AgsI TTSAA 4 cut(s) 229, 517, 551, 605
AjiI CACGTC 1 cut(s) 195
AluBI AGCT 2 cut(s) 624, 772
AluI AGCT 2 cut(s) 624, 772
Alw21I GWGCWC 1 cut(s) 189
Alw26I GTCTC 1 cut(s) 289
AlwI GGATC 2 cut(s) 339, 352
AlwNI CAGNNNCTG 1 cut(s) 178
Ama87I CYCGRG 2 cut(s) 355, 428
Aor13HI TCCGGA 1 cut(s) 234
AoxI GGCC 9 cut(s) 29, 48, 110, 221, 378, 467, 718, 725, 779
ApaI GGGCCC 1 cut(s) 722
ApeKI GCWGC 2 cut(s) 711, 772
AspA2I CCTAGG 1 cut(s) 722
AspLEI GCGC 8 cut(s) 7, 15, 70, 214, 597, 619, 634, 688
AsuHPI GGTGA 3 cut(s) 304, 431, 761
AvaI CYCGRG 2 cut(s) 355, 428
AvaII GGWCC 5 cut(s) 169, 240, 391, 397, 479
AvrII CCTAGG 1 cut(s) 722
BaeGI GKGCMC 2 cut(s) 387, 722
BamHI GGATCC 1 cut(s) 344
BanI GGYRCC 1 cut(s) 130
BanII GRGCYC 2 cut(s) 101, 722
BbrPI CACGTG 1 cut(s) 740
Bbv12I GWGCWC 1 cut(s) 189
BbvI GCAGC 2 cut(s) 723, 759
BceAI ACGGC 4 cut(s) 16, 97, 166, 677
BcoDI GTCTC 1 cut(s) 289
BfaI CTAG 3 cut(s) 555, 671, 723
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 8
BglI GCCNNNNNGGC 2 cut(s) 37, 220
BglII AGATCT 1 cut(s) 123
BlnI CCTAGG 1 cut(s) 722
BlpI GCTNAGC 1 cut(s) 154
Bme18I GGWCC 5 cut(s) 169, 240, 391, 397, 479
BmeT110I CYCGRG 2 cut(s) 355, 428
BmgBI CACGTC 1 cut(s) 195
BmsI GCATC 1 cut(s) 287
Bpu1102I GCTNAGC 1 cut(s) 154
BsaAI YACGTR 1 cut(s) 740
BsaI GGTCTC 1 cut(s) 289
BsaWI WCCGGW 1 cut(s) 234
BsaXI ACNNNNNCTCC 4 cut(s) 98, 128, 153, 183
Bse118I RCCGGY 2 cut(s) 46, 465
BseAI TCCGGA 1 cut(s) 234
BseMII CTCAG 1 cut(s) 168
BseSI GKGCMC 2 cut(s) 387, 722
BseX3I CGGCCG 3 cut(s) 29, 110, 467
BseXI GCAGC 2 cut(s) 723, 759
BsgI GTGCAG 1 cut(s) 140
Bsh1236I CGCG 8 cut(s) 15, 70, 199, 442, 461, 595, 613, 619
Bsh1285I CGRYCG 5 cut(s) 32, 77, 113, 264, 470
BshFI GGCC 9 cut(s) 31, 50, 112, 223, 380, 469, 720, 727, 781
BshNI GGYRCC 1 cut(s) 130
BsiEI CGRYCG 5 cut(s) 32, 77, 113, 264, 470
BsiHKAI GWGCWC 1 cut(s) 189
BsiHKCI CYCGRG 2 cut(s) 355, 428
BslFI GGGAC 3 cut(s) 377, 383, 488
BsmAI GTCTC 1 cut(s) 289
BsmFI GGGAC 3 cut(s) 377, 383, 488
BsnI GGCC 9 cut(s) 31, 50, 112, 223, 380, 469, 720, 727, 781
Bso31I GGTCTC 1 cut(s) 289
BsoBI CYCGRG 2 cut(s) 355, 428
Bsp120I GGGCCC 1 cut(s) 718
Bsp1286I GDGCHC 4 cut(s) 101, 189, 387, 722
Bsp13I TCCGGA 1 cut(s) 234
Bsp143I GATC 2 cut(s) 123, 344
Bsp1720I GCTNAGC 1 cut(s) 154
BspANI GGCC 9 cut(s) 31, 50, 112, 223, 380, 469, 720, 727, 781
BspCNI CTCAG 1 cut(s) 167
BspEI TCCGGA 1 cut(s) 234
BspFNI CGCG 8 cut(s) 15, 70, 199, 442, 461, 595, 613, 619
BspPI GGATC 2 cut(s) 339, 352
BspQI GCTCTTC 1 cut(s) 177
BspT107I GGYRCC 1 cut(s) 130
BspTI CTTAAG 1 cut(s) 8
BspTNI GGTCTC 1 cut(s) 289
BsrBI CCGCTC 2 cut(s) 109, 451
BsrFI RCCGGY 2 cut(s) 46, 465
BssAI RCCGGY 2 cut(s) 46, 465
BssMI GATC 2 cut(s) 123, 344
BssT1I CCWWGG 2 cut(s) 288, 722
Bst4CI ACNGT 3 cut(s) 533, 571, 629
Bst6I CTCTTC 1 cut(s) 177
BstAFI CTTAAG 1 cut(s) 8
BstBAI YACGTR 1 cut(s) 740
BstC8I GCNNGC 7 cut(s) 48, 135, 463, 467, 615, 684, 690
BstDEI CTNAG 2 cut(s) 154, 656
BstDSI CCRYGG 2 cut(s) 440, 611
BstFNI CGCG 8 cut(s) 15, 70, 199, 442, 461, 595, 613, 619
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 8 cut(s) 7, 15, 70, 214, 597, 619, 634, 688
BstKTI GATC 2 cut(s) 126, 347
BstMAI GTCTC 1 cut(s) 289
BstMBI GATC 2 cut(s) 123, 344
BstMCI CGRYCG 5 cut(s) 32, 77, 113, 264, 470
BstNSI RCATGY 1 cut(s) 686
BstSLI GKGCMC 2 cut(s) 387, 722
BstUI CGCG 8 cut(s) 15, 70, 199, 442, 461, 595, 613, 619
BstV1I GCAGC 2 cut(s) 723, 759
BstX2I RGATCY 2 cut(s) 123, 344
BstYI RGATCY 2 cut(s) 123, 344
BstZI CGGCCG 3 cut(s) 29, 110, 467
BsuRI GGCC 9 cut(s) 31, 50, 112, 223, 380, 469, 720, 727, 781
BtgI CCRYGG 2 cut(s) 440, 611
BtgZI GCGATG 1 cut(s) 576
BtrI CACGTC 1 cut(s) 195
Cac8I GCNNGC 7 cut(s) 48, 135, 463, 467, 615, 684, 690
CaiI CAGNNNCTG 1 cut(s) 178
CfoI GCGC 8 cut(s) 7, 15, 70, 214, 597, 619, 634, 688
Cfr10I RCCGGY 2 cut(s) 46, 465
Cfr42I CCGCGG 2 cut(s) 443, 614
CpoI CGGWCCG 1 cut(s) 479
CseI GACGC 1 cut(s) 688
Csp6I GTAC 2 cut(s) 266, 558
CspI CGGWCCG 1 cut(s) 479
CviAII CATG 1 cut(s) 683
CviQI GTAC 2 cut(s) 266, 558
DdeI CTNAG 2 cut(s) 154, 656
DpnI GATC 2 cut(s) 125, 346
DpnII GATC 2 cut(s) 123, 344
EaeI YGGCCR 3 cut(s) 29, 110, 467
EagI CGGCCG 3 cut(s) 29, 110, 467
Eam1104I CTCTTC 1 cut(s) 177
EarI CTCTTC 1 cut(s) 177
EciI GGCGGA 1 cut(s) 119
EclXI CGGCCG 3 cut(s) 29, 110, 467
Eco130I CCWWGG 2 cut(s) 288, 722
Eco24I GRGCYC 2 cut(s) 101, 722
Eco31I GGTCTC 1 cut(s) 289
Eco47I GGWCC 5 cut(s) 169, 240, 391, 397, 479
Eco52I CGGCCG 3 cut(s) 29, 110, 467
Eco72I CACGTG 1 cut(s) 740
Eco88I CYCGRG 2 cut(s) 355, 428
EcoO109I RGGNCCY 4 cut(s) 391, 718, 719, 726
EcoT14I CCWWGG 2 cut(s) 288, 722
EcoT38I GRGCYC 2 cut(s) 101, 722
ErhI CCWWGG 2 cut(s) 288, 722
FaeI CATG 1 cut(s) 686
FaiI YATR 4 cut(s) 24, 272, 642, 684
FaqI GGGAC 3 cut(s) 377, 383, 488
FatI CATG 1 cut(s) 682
FauI CCCGC 4 cut(s) 444, 606, 697, 716
FblI GTMKAC 1 cut(s) 522
FriOI GRGCYC 2 cut(s) 101, 722
FspBI CTAG 3 cut(s) 555, 671, 723
GlaI GCGC 8 cut(s) 6, 14, 69, 213, 596, 618, 633, 687
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 9 cut(s) 31, 50, 112, 223, 380, 469, 720, 727, 781
HgaI GACGC 1 cut(s) 688
HhaI GCGC 8 cut(s) 7, 15, 70, 214, 597, 619, 634, 688
Hin1II CATG 1 cut(s) 686
Hin6I GCGC 8 cut(s) 5, 13, 68, 212, 595, 617, 632, 686
HinP1I GCGC 8 cut(s) 5, 13, 68, 212, 595, 617, 632, 686
HincII GTYRAC 1 cut(s) 523
HindII GTYRAC 1 cut(s) 523
HinfI GANTC 3 cut(s) 524, 575, 663
HphI GGTGA 3 cut(s) 304, 431, 761
Hpy166II GTNNAC 3 cut(s) 295, 422, 523
Hpy188I TCNGA 2 cut(s) 375, 698
Hpy188III TCNNGA 3 cut(s) 235, 357, 400
Hpy8I GTNNAC 3 cut(s) 295, 422, 523
Hpy99I CGWCG 6 cut(s) 37, 118, 199, 412, 524, 682
HpyAV CCTTC 1 cut(s) 503
HpyCH4III ACNGT 3 cut(s) 533, 571, 629
HpyCH4IV ACGT 3 cut(s) 194, 519, 739
HpyCH4V TGCA 1 cut(s) 121
HpyF3I CTNAG 2 cut(s) 154, 656
HpySE526I ACGT 3 cut(s) 194, 519, 739
Hsp92II CATG 1 cut(s) 686
HspAI GCGC 8 cut(s) 5, 13, 68, 212, 595, 617, 632, 686
KflI GGGWCCC 1 cut(s) 391
Kpn2I TCCGGA 1 cut(s) 234
KroI GCCGGC 2 cut(s) 46, 465
KroNI GCCGGC 2 cut(s) 48, 467
KspI CCGCGG 2 cut(s) 443, 614
Kzo9I GATC 2 cut(s) 123, 344
LguI GCTCTTC 1 cut(s) 177
LmnI GCTCC 3 cut(s) 106, 376, 495
Lsp1109I GCAGC 2 cut(s) 723, 759
LweI GCATC 1 cut(s) 287
MaeI CTAG 3 cut(s) 555, 671, 723
MaeII ACGT 3 cut(s) 194, 519, 739
MaeIII GTNAC 2 cut(s) 16, 349
MalI GATC 2 cut(s) 125, 346
MbiI CCGCTC 2 cut(s) 109, 451
MboI GATC 2 cut(s) 123, 344
MboII GAAGA 1 cut(s) 194
MfeI CAATTG 1 cut(s) 583
MflI RGATCY 2 cut(s) 123, 344
MhlI GDGCHC 4 cut(s) 101, 189, 387, 722
MluCI AATT 2 cut(s) 546, 583
MlyI GAGTC 1 cut(s) 518
MroI TCCGGA 1 cut(s) 234
MroNI GCCGGC 2 cut(s) 46, 465
MseI TTAA 1 cut(s) 9
MspA1I CMGCKG 3 cut(s) 175, 442, 613
MspCI CTTAAG 1 cut(s) 8
MunI CAATTG 1 cut(s) 583
MvnI CGCG 8 cut(s) 15, 70, 199, 442, 461, 595, 613, 619
NaeI GCCGGC 2 cut(s) 48, 467
NdeII GATC 2 cut(s) 123, 344
NgoMIV GCCGGC 2 cut(s) 46, 465
NlaIII CATG 1 cut(s) 686
NmuCI GTSAC 1 cut(s) 16
NspI RCATGY 1 cut(s) 686
PaeI GCATGC 1 cut(s) 686
PaeR7I CTCGAG 1 cut(s) 428
PciSI GCTCTTC 1 cut(s) 177
PdiI GCCGGC 2 cut(s) 48, 467
PfeI GAWTC 2 cut(s) 575, 663
PflMI CCANNNNNTGG 1 cut(s) 178
PleI GAGTC 1 cut(s) 518
PmaCI CACGTG 1 cut(s) 740
PmlI CACGTG 1 cut(s) 740
PpsI GAGTC 1 cut(s) 518
Ppu21I YACGTR 1 cut(s) 740
PpuMI RGGWCCY 1 cut(s) 391
Psp5II RGGWCCY 1 cut(s) 391
PspCI CACGTG 1 cut(s) 740
PspOMI GGGCCC 1 cut(s) 718
PspPPI RGGWCCY 1 cut(s) 391
PspXI VCTCGAGB 1 cut(s) 428
PstNI CAGNNNCTG 1 cut(s) 178
PsuI RGATCY 2 cut(s) 123, 344
RsaI GTAC 2 cut(s) 267, 559
RsaNI GTAC 2 cut(s) 266, 558
Rsr2I CGGWCCG 1 cut(s) 479
RsrII CGGWCCG 1 cut(s) 479
SacII CCGCGG 2 cut(s) 443, 614
SalI GTCGAC 1 cut(s) 521
SapI GCTCTTC 1 cut(s) 177
SaqAI TTAA 1 cut(s) 9
Sau3AI GATC 2 cut(s) 123, 344
SchI GAGTC 1 cut(s) 518
SduI GDGCHC 4 cut(s) 101, 189, 387, 722
SfaNI GCATC 1 cut(s) 287
Sfr274I CTCGAG 1 cut(s) 428
Sfr303I CCGCGG 2 cut(s) 443, 614
SgrBI CCGCGG 2 cut(s) 443, 614
SinI GGWCC 5 cut(s) 169, 240, 391, 397, 479
SlaI CTCGAG 1 cut(s) 428
SmlI CTYRAG 2 cut(s) 8, 428
SmoI CTYRAG 2 cut(s) 8, 428
SphI GCATGC 1 cut(s) 686
Sse9I AATT 2 cut(s) 546, 583
SspMI CTAG 3 cut(s) 555, 671, 723
StyI CCWWGG 2 cut(s) 288, 722
TaaI ACNGT 3 cut(s) 533, 571, 629
TaiI ACGT 3 cut(s) 197, 522, 742
TaqI TCGA 4 cut(s) 429, 522, 527, 661
TaqII GACCGA 4 cut(s) 257, 271, 293, 660
TasI AATT 2 cut(s) 546, 583
TfiI GAWTC 2 cut(s) 575, 663
Tru1I TTAA 1 cut(s) 9
Tru9I TTAA 1 cut(s) 9
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 2 cut(s) 711, 772
Tsp45I GTSAC 1 cut(s) 16
TspGWI ACGGA 3 cut(s) 197, 337, 492
Van91I CCANNNNNTGG 1 cut(s) 178
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 5 cut(s) 169, 240, 391, 397, 479
XceI RCATGY 1 cut(s) 686
XhoI CTCGAG 1 cut(s) 428
XmaJI CCTAGG 1 cut(s) 722
XmiI GTMKAC 1 cut(s) 522
XspI CTAG 3 cut(s) 555, 671, 723
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.