Encoded by
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 109, 267 |
| AccI | GTMKAC | 1 cut(s) | 338 |
| AccII | CGCG | 4 cut(s) | 15, 70, 258, 277 |
| AciI | CCGC | 8 cut(s) | 70, 73, 104, 109, 121, 258, 267, 275 |
| AclWI | GGATC | 2 cut(s) | 131, 209 |
| AcoI | YGGCCR | 3 cut(s) | 28, 110, 283 |
| AfaI | GTAC | 1 cut(s) | 352 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 33, 281, 288, 292 |
| AflII | CTTAAG | 1 cut(s) | 8 |
| AgsI | TTSAA | 3 cut(s) | 149, 163, 332 |
| AluBI | AGCT | 2 cut(s) | 241, 250 |
| AluI | AGCT | 2 cut(s) | 241, 250 |
| AlwI | GGATC | 2 cut(s) | 131, 209 |
| Ama87I | CYCGRG | 3 cut(s) | 245, 322, 342 |
| AoxI | GGCC | 4 cut(s) | 28, 110, 165, 283 |
| ApeKI | GCWGC | 4 cut(s) | 79, 187, 241, 250 |
| AspLEI | GCGC | 3 cut(s) | 7, 15, 70 |
| AspS9I | GGNCC | 1 cut(s) | 209 |
| AsuC2I | CCSGG | 3 cut(s) | 287, 323, 324 |
| AsuHPI | GGTGA | 1 cut(s) | 248 |
| AvaI | CYCGRG | 3 cut(s) | 245, 322, 342 |
| AvaII | GGWCC | 1 cut(s) | 209 |
| BaeGI | GKGCMC | 1 cut(s) | 204 |
| BanII | GRGCYC | 1 cut(s) | 52 |
| BbvI | GCAGC | 4 cut(s) | 66, 174, 228, 237 |
| BceAI | ACGGC | 2 cut(s) | 15, 97 |
| BcnI | CCSGG | 3 cut(s) | 287, 323, 324 |
| BfoI | RGCGCY | 1 cut(s) | 8 |
| BfrI | CTTAAG | 1 cut(s) | 8 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 36 |
| BisI | GCNGC | 8 cut(s) | 71, 80, 110, 188, 242, 251, 259, 275 |
| BlsI | GCNGC | 8 cut(s) | 72, 81, 111, 189, 243, 252, 260, 276 |
| Bme1390I | CCNGG | 3 cut(s) | 287, 323, 324 |
| Bme18I | GGWCC | 1 cut(s) | 209 |
| BmeT110I | CYCGRG | 3 cut(s) | 245, 322, 342 |
| BmgT120I | GGNCC | 1 cut(s) | 209 |
| BmiI | GGNNCC | 2 cut(s) | 210, 211 |
| BmrFI | CCNGG | 3 cut(s) | 287, 323, 324 |
| BpuMI | CCSGG | 3 cut(s) | 287, 323, 324 |
| BsaJI | CCNNGG | 2 cut(s) | 286, 322 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 98, 128 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 33, 281, 288, 292 |
| Bse118I | RCCGGY | 3 cut(s) | 26, 100, 281 |
| BseDI | CCNNGG | 2 cut(s) | 286, 322 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 33, 281, 288, 292 |
| BseSI | GKGCMC | 1 cut(s) | 204 |
| BseX3I | CGGCCG | 3 cut(s) | 28, 110, 283 |
| BseXI | GCAGC | 4 cut(s) | 66, 174, 228, 237 |
| BseYI | CCCAGC | 1 cut(s) | 197 |
| Bsh1236I | CGCG | 4 cut(s) | 15, 70, 258, 277 |
| Bsh1285I | CGRYCG | 5 cut(s) | 31, 77, 113, 286, 338 |
| BshFI | GGCC | 4 cut(s) | 30, 112, 167, 285 |
| BsiEI | CGRYCG | 5 cut(s) | 31, 77, 113, 286, 338 |
| BsiHKCI | CYCGRG | 3 cut(s) | 245, 322, 342 |
| BsiSI | CCGG | 5 cut(s) | 27, 101, 282, 286, 323 |
| BslFI | GGGAC | 2 cut(s) | 195, 304 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 33, 281, 288, 292 |
| BsmFI | GGGAC | 2 cut(s) | 195, 304 |
| BsnI | GGCC | 4 cut(s) | 30, 112, 167, 285 |
| BsoBI | CYCGRG | 3 cut(s) | 245, 322, 342 |
| Bsp1286I | GDGCHC | 2 cut(s) | 52, 204 |
| Bsp143I | GATC | 2 cut(s) | 123, 214 |
| BspACI | CCGC | 8 cut(s) | 70, 73, 104, 109, 121, 258, 267, 275 |
| BspANI | GGCC | 4 cut(s) | 30, 112, 167, 285 |
| BspFNI | CGCG | 4 cut(s) | 15, 70, 258, 277 |
| BspLI | GGNNCC | 2 cut(s) | 210, 211 |
| BspPI | GGATC | 2 cut(s) | 131, 209 |
| BspTI | CTTAAG | 1 cut(s) | 8 |
| BsrBI | CCGCTC | 2 cut(s) | 109, 267 |
| BsrFI | RCCGGY | 3 cut(s) | 26, 100, 281 |
| BssAI | RCCGGY | 3 cut(s) | 26, 100, 281 |
| BssECI | CCNNGG | 2 cut(s) | 286, 322 |
| BssMI | GATC | 2 cut(s) | 123, 214 |
| Bst4CI | ACNGT | 1 cut(s) | 336 |
| Bst6I | CTCTTC | 1 cut(s) | 165 |
| BstAFI | CTTAAG | 1 cut(s) | 8 |
| BstC8I | GCNNGC | 3 cut(s) | 102, 279, 283 |
| BstFNI | CGCG | 4 cut(s) | 15, 70, 258, 277 |
| BstH2I | RGCGCY | 1 cut(s) | 8 |
| BstHHI | GCGC | 3 cut(s) | 7, 15, 70 |
| BstKTI | GATC | 2 cut(s) | 126, 217 |
| BstMBI | GATC | 2 cut(s) | 123, 214 |
| BstMCI | CGRYCG | 5 cut(s) | 31, 77, 113, 286, 338 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 36, 76, 79, 106, 118, 247, 250, 264 |
| BstSCI | CCNGG | 3 cut(s) | 285, 321, 322 |
| BstSLI | GKGCMC | 1 cut(s) | 204 |
| BstUI | CGCG | 4 cut(s) | 15, 70, 258, 277 |
| BstV1I | GCAGC | 4 cut(s) | 66, 174, 228, 237 |
| BstX2I | RGATCY | 1 cut(s) | 123 |
| BstYI | RGATCY | 1 cut(s) | 123 |
| BstZI | CGGCCG | 3 cut(s) | 28, 110, 283 |
| BsuRI | GGCC | 4 cut(s) | 30, 112, 167, 285 |
| Cac8I | GCNNGC | 3 cut(s) | 102, 279, 283 |
| CfoI | GCGC | 3 cut(s) | 7, 15, 70 |
| Cfr10I | RCCGGY | 3 cut(s) | 26, 100, 281 |
| Cfr13I | GGNCC | 1 cut(s) | 209 |
| Cfr9I | CCCGGG | 1 cut(s) | 322 |
| Csp6I | GTAC | 1 cut(s) | 351 |
| CviQI | GTAC | 1 cut(s) | 351 |
| DpnI | GATC | 2 cut(s) | 125, 216 |
| DpnII | GATC | 2 cut(s) | 123, 214 |
| EaeI | YGGCCR | 3 cut(s) | 28, 110, 283 |
| EagI | CGGCCG | 3 cut(s) | 28, 110, 283 |
| Eam1104I | CTCTTC | 1 cut(s) | 165 |
| EarI | CTCTTC | 1 cut(s) | 165 |
| EciI | GGCGGA | 1 cut(s) | 119 |
| EclXI | CGGCCG | 3 cut(s) | 28, 110, 283 |
| Eco24I | GRGCYC | 1 cut(s) | 52 |
| Eco47I | GGWCC | 1 cut(s) | 209 |
| Eco52I | CGGCCG | 3 cut(s) | 28, 110, 283 |
| Eco88I | CYCGRG | 3 cut(s) | 245, 322, 342 |
| EcoO109I | RGGNCCY | 1 cut(s) | 209 |
| EcoT38I | GRGCYC | 1 cut(s) | 52 |
| FaiI | YATR | 1 cut(s) | 24 |
| FaqI | GGGAC | 2 cut(s) | 195, 304 |
| FauI | CCCGC | 1 cut(s) | 260 |
| FblI | GTMKAC | 1 cut(s) | 338 |
| Fnu4HI | GCNGC | 8 cut(s) | 71, 80, 110, 188, 242, 251, 259, 275 |
| FriOI | GRGCYC | 1 cut(s) | 52 |
| Fsp4HI | GCNGC | 8 cut(s) | 71, 80, 110, 188, 242, 251, 259, 275 |
| GlaI | GCGC | 3 cut(s) | 6, 14, 69 |
| GluI | GCNGC | 8 cut(s) | 71, 80, 110, 188, 242, 251, 259, 275 |
| GsaI | CCCAGC | 1 cut(s) | 201 |
| HaeII | RGCGCY | 1 cut(s) | 8 |
| HaeIII | GGCC | 4 cut(s) | 30, 112, 167, 285 |
| HapII | CCGG | 5 cut(s) | 27, 101, 282, 286, 323 |
| HhaI | GCGC | 3 cut(s) | 7, 15, 70 |
| Hin6I | GCGC | 3 cut(s) | 5, 13, 68 |
| HinP1I | GCGC | 3 cut(s) | 5, 13, 68 |
| HincII | GTYRAC | 1 cut(s) | 339 |
| HindII | GTYRAC | 1 cut(s) | 339 |
| HinfI | GANTC | 2 cut(s) | 340, 364 |
| HpaII | CCGG | 5 cut(s) | 27, 101, 282, 286, 323 |
| HphI | GGTGA | 1 cut(s) | 248 |
| Hpy166II | GTNNAC | 1 cut(s) | 339 |
| Hpy188I | TCNGA | 2 cut(s) | 219, 369 |
| Hpy188III | TCNNGA | 1 cut(s) | 212 |
| Hpy8I | GTNNAC | 1 cut(s) | 339 |
| Hpy99I | CGWCG | 3 cut(s) | 36, 118, 229 |
| HpyAV | CCTTC | 2 cut(s) | 157, 318 |
| HpyCH4III | ACNGT | 1 cut(s) | 336 |
| HpyCH4V | TGCA | 1 cut(s) | 82 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 36, 76, 79, 106, 118, 247, 250, 264 |
| HspAI | GCGC | 3 cut(s) | 5, 13, 68 |
| KflI | GGGWCCC | 1 cut(s) | 209 |
| KroI | GCCGGC | 2 cut(s) | 100, 281 |
| KroNI | GCCGGC | 2 cut(s) | 102, 283 |
| Kzo9I | GATC | 2 cut(s) | 123, 214 |
| LmnI | GCTCC | 2 cut(s) | 106, 310 |
| LpnPI | CCDG | 8 cut(s) | 40, 75, 114, 183, 295, 299, 333, 336 |
| Lsp1109I | GCAGC | 4 cut(s) | 66, 174, 228, 237 |
| MaeIII | GTNAC | 1 cut(s) | 16 |
| MalI | GATC | 2 cut(s) | 125, 216 |
| MbiI | CCGCTC | 2 cut(s) | 109, 267 |
| MboI | GATC | 2 cut(s) | 123, 214 |
| MboII | GAAGA | 1 cut(s) | 182 |
| MflI | RGATCY | 1 cut(s) | 123 |
| MhlI | GDGCHC | 2 cut(s) | 52, 204 |
| MlyI | GAGTC | 1 cut(s) | 334 |
| MnlI | CCTC | 3 cut(s) | 57, 166, 185 |
| MroNI | GCCGGC | 2 cut(s) | 100, 281 |
| MseI | TTAA | 2 cut(s) | 9, 376 |
| MspCI | CTTAAG | 1 cut(s) | 8 |
| MspI | CCGG | 5 cut(s) | 27, 101, 282, 286, 323 |
| MspR9I | CCNGG | 3 cut(s) | 287, 323, 324 |
| MvnI | CGCG | 4 cut(s) | 15, 70, 258, 277 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 36, 76, 79, 106, 118, 247, 250, 264 |
| NaeI | GCCGGC | 2 cut(s) | 102, 283 |
| NciI | CCSGG | 3 cut(s) | 287, 323, 324 |
| NdeII | GATC | 2 cut(s) | 123, 214 |
| NgoMIV | GCCGGC | 2 cut(s) | 100, 281 |
| NlaIV | GGNNCC | 2 cut(s) | 210, 211 |
| NmeAIII | GCCGAG | 1 cut(s) | 71 |
| NmuCI | GTSAC | 1 cut(s) | 16 |
| PaeR7I | CTCGAG | 1 cut(s) | 245 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 210 |
| PdiI | GCCGGC | 2 cut(s) | 102, 283 |
| PfeI | GAWTC | 1 cut(s) | 364 |
| PkrI | GCNGC | 8 cut(s) | 72, 81, 111, 189, 243, 252, 260, 276 |
| PleI | GAGTC | 1 cut(s) | 334 |
| PpsI | GAGTC | 1 cut(s) | 334 |
| PpuMI | RGGWCCY | 1 cut(s) | 209 |
| Psp5II | RGGWCCY | 1 cut(s) | 209 |
| PspFI | CCCAGC | 1 cut(s) | 197 |
| PspN4I | GGNNCC | 2 cut(s) | 210, 211 |
| PspPI | GGNCC | 1 cut(s) | 209 |
| PspPPI | RGGWCCY | 1 cut(s) | 209 |
| PspXI | VCTCGAGB | 1 cut(s) | 245 |
| PsuI | RGATCY | 1 cut(s) | 123 |
| RsaI | GTAC | 1 cut(s) | 352 |
| RsaNI | GTAC | 1 cut(s) | 351 |
| SalI | GTCGAC | 1 cut(s) | 337 |
| SaqAI | TTAA | 2 cut(s) | 9, 376 |
| SatI | GCNGC | 8 cut(s) | 71, 80, 110, 188, 242, 251, 259, 275 |
| Sau3AI | GATC | 2 cut(s) | 123, 214 |
| Sau96I | GGNCC | 1 cut(s) | 209 |
| SchI | GAGTC | 1 cut(s) | 334 |
| ScrFI | CCNGG | 3 cut(s) | 287, 323, 324 |
| SduI | GDGCHC | 2 cut(s) | 52, 204 |
| SetI | ASST | 3 cut(s) | 23, 243, 252 |
| Sfr274I | CTCGAG | 1 cut(s) | 245 |
| SinI | GGWCC | 1 cut(s) | 209 |
| SlaI | CTCGAG | 1 cut(s) | 245 |
| SmaI | CCCGGG | 1 cut(s) | 324 |
| SmlI | CTYRAG | 2 cut(s) | 8, 245 |
| SmoI | CTYRAG | 2 cut(s) | 8, 245 |
| SsiI | CCGC | 8 cut(s) | 70, 73, 104, 109, 121, 258, 267, 275 |
| SspI | AATATT | 1 cut(s) | 145 |
| StyD4I | CCNGG | 3 cut(s) | 285, 321, 322 |
| TaaI | ACNGT | 1 cut(s) | 336 |
| TaqI | TCGA | 2 cut(s) | 246, 338 |
| TauI | GCSGC | 4 cut(s) | 73, 112, 261, 277 |
| TfiI | GAWTC | 1 cut(s) | 364 |
| Tru1I | TTAA | 2 cut(s) | 9, 376 |
| Tru9I | TTAA | 2 cut(s) | 9, 376 |
| TseFI | GTSAC | 1 cut(s) | 16 |
| TseI | GCWGC | 4 cut(s) | 79, 187, 241, 250 |
| Tsp45I | GTSAC | 1 cut(s) | 16 |
| TspGWI | ACGGA | 2 cut(s) | 308, 368 |
| TspMI | CCCGGG | 1 cut(s) | 322 |
| Vha464I | CTTAAG | 1 cut(s) | 8 |
| VpaK11BI | GGWCC | 1 cut(s) | 209 |
| XhoI | CTCGAG | 1 cut(s) | 245 |
| XmaI | CCCGGG | 1 cut(s) | 322 |
| XmiI | GTMKAC | 1 cut(s) | 338 |