Rroxscaffold_65G00445280

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000065
OG0000104
Physical Location & Seq
Reverse (-)
373 .. 1786
1414 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_65G00445280.1

Sequence Viewer

Length: 471 bp
ATGGTAGGCGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCTGGTAACGGCCTGCGGGCTCCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCGACATGTGTGCGAGTCAACGGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTTCTGTTTAACAGCCTGCCCACCCGGAAACGGCTCGGCCGGAGGTAGGGTCCAGCGGCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGCGCCCCCGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCTGGGCACGGGGTCCCGGTCCCCGAACCCGTCGGCTGTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

156

Amino Acids

16.23

Weight (kDa)

10.25

Isoelectric Point (pI)

65.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 102
AatII GACGTC 1 cut(s) 143
AccB1I GGYRCC 1 cut(s) 260
AccI GTMKAC 1 cut(s) 106
AccII CGCG 2 cut(s) 249, 269
AccIII TCCGGA 2 cut(s) 133, 283
AciI CCGC 8 cut(s) 63, 146, 226, 229, 240, 267, 269, 324
AclWI GGATC 2 cut(s) 388, 401
AcoI YGGCCR 1 cut(s) 207
AcyI GRCGYC 2 cut(s) 140, 261
AfaI GTAC 1 cut(s) 315
AfiI CCNNNNNNNGG 3 cut(s) 55, 200, 216
AflIII ACRYGT 1 cut(s) 109
AgsI TTSAA 2 cut(s) 88, 278
AjiI CACGTC 1 cut(s) 245
AjnI CCWGG 1 cut(s) 48
Alw21I GWGCWC 2 cut(s) 48, 239
Alw26I GTCTC 3 cut(s) 25, 131, 338
AlwI GGATC 2 cut(s) 388, 401
Ama87I CYCGRG 3 cut(s) 154, 404, 421
Aor13HI TCCGGA 2 cut(s) 133, 283
AoxI GGCC 5 cut(s) 57, 77, 150, 207, 270
AspLEI GCGC 3 cut(s) 11, 17, 263
AspS9I GGNCC 8 cut(s) 78, 95, 150, 220, 271, 289, 439, 445
AsuC2I CCSGG 2 cut(s) 195, 443
AsuHPI GGTGA 1 cut(s) 353
AvaI CYCGRG 3 cut(s) 154, 404, 421
AvaII GGWCC 5 cut(s) 95, 220, 289, 439, 445
BaeGI GKGCMC 1 cut(s) 435
BamHI GGATCC 1 cut(s) 393
BanI GGYRCC 1 cut(s) 260
BanII GRGCYC 1 cut(s) 69
Bbv12I GWGCWC 2 cut(s) 48, 239
BceAI ACGGC 3 cut(s) 2, 72, 217
BcgI CGANNNNNNTGC 2 cut(s) 96, 130
BciT130I CCWGG 1 cut(s) 50
BcnI CCSGG 2 cut(s) 195, 443
BcoDI GTCTC 3 cut(s) 25, 131, 338
BfoI RGCGCY 1 cut(s) 264
BglI GCCNNNNNGGC 2 cut(s) 23, 269
BisI GCNGC 2 cut(s) 227, 270
BlsI GCNGC 2 cut(s) 228, 271
Bme1390I CCNGG 3 cut(s) 50, 195, 443
Bme18I GGWCC 5 cut(s) 95, 220, 289, 439, 445
BmeT110I CYCGRG 3 cut(s) 154, 404, 421
BmgBI CACGTC 1 cut(s) 245
BmgT120I GGNCC 8 cut(s) 78, 95, 150, 220, 271, 289, 439, 445
BmiI GGNNCC 8 cut(s) 68, 151, 221, 262, 395, 440, 441, 447
BmrFI CCNGG 3 cut(s) 50, 195, 443
BmsI GCATC 2 cut(s) 45, 335
BpuMI CCSGG 2 cut(s) 195, 443
BsaHI GRCGYC 2 cut(s) 140, 261
BsaI GGTCTC 1 cut(s) 338
BsaJI CCNNGG 6 cut(s) 98, 153, 267, 337, 350, 403
BsaWI WCCGGW 2 cut(s) 133, 283
BsaXI ACNNNNNCTCC 2 cut(s) 204, 234
Bsc4I CCNNNNNNNGG 3 cut(s) 55, 200, 216
Bse118I RCCGGY 1 cut(s) 307
BseAI TCCGGA 2 cut(s) 133, 283
BseBI CCWGG 1 cut(s) 50
BseDI CCNNGG 6 cut(s) 98, 153, 267, 337, 350, 403
BseLI CCNNNNNNNGG 3 cut(s) 55, 200, 216
BseSI GKGCMC 1 cut(s) 435
BseX3I CGGCCG 1 cut(s) 207
BseYI CCCAGC 1 cut(s) 428
Bsh1236I CGCG 2 cut(s) 249, 269
Bsh1285I CGRYCG 2 cut(s) 210, 312
BshFI GGCC 5 cut(s) 59, 79, 152, 209, 272
BshNI GGYRCC 1 cut(s) 260
BsiEI CGRYCG 2 cut(s) 210, 312
BsiHKAI GWGCWC 2 cut(s) 48, 239
BsiHKCI CYCGRG 3 cut(s) 154, 404, 421
BsiSI CCGG 7 cut(s) 134, 195, 210, 258, 284, 308, 443
BslFI GGGAC 2 cut(s) 425, 431
BslI CCNNNNNNNGG 3 cut(s) 55, 200, 216
BsmAI GTCTC 3 cut(s) 25, 131, 338
BsmBI CGTCTC 2 cut(s) 25, 131
BsmFI GGGAC 2 cut(s) 425, 431
BsnI GGCC 5 cut(s) 59, 79, 152, 209, 272
Bso31I GGTCTC 1 cut(s) 338
BsoBI CYCGRG 3 cut(s) 154, 404, 421
Bsp1286I GDGCHC 4 cut(s) 48, 69, 239, 435
Bsp13I TCCGGA 2 cut(s) 133, 283
Bsp143I GATC 1 cut(s) 393
BspACI CCGC 8 cut(s) 63, 146, 226, 229, 240, 267, 269, 324
BspANI GGCC 5 cut(s) 59, 79, 152, 209, 272
BspEI TCCGGA 2 cut(s) 133, 283
BspFNI CGCG 2 cut(s) 249, 269
BspLI GGNNCC 8 cut(s) 68, 151, 221, 262, 395, 440, 441, 447
BspPI GGATC 2 cut(s) 388, 401
BspQI GCTCTTC 1 cut(s) 227
BspT107I GGYRCC 1 cut(s) 260
BspTNI GGTCTC 1 cut(s) 338
BsrFI RCCGGY 1 cut(s) 307
BssAI RCCGGY 1 cut(s) 307
BssECI CCNNGG 6 cut(s) 98, 153, 267, 337, 350, 403
BssMI GATC 1 cut(s) 393
BssNI GRCGYC 2 cut(s) 140, 261
BssT1I CCWWGG 2 cut(s) 98, 337
Bst2UI CCWGG 1 cut(s) 50
Bst6I CTCTTC 2 cut(s) 154, 227
BstACI GRCGYC 2 cut(s) 140, 261
BstC8I GCNNGC 6 cut(s) 13, 28, 44, 61, 65, 187
BstDSI CCRYGG 1 cut(s) 267
BstFNI CGCG 2 cut(s) 249, 269
BstH2I RGCGCY 1 cut(s) 264
BstHHI GCGC 3 cut(s) 11, 17, 263
BstKTI GATC 1 cut(s) 396
BstMAI GTCTC 3 cut(s) 25, 131, 338
BstMBI GATC 1 cut(s) 393
BstMCI CGRYCG 2 cut(s) 210, 312
BstMWI GCNNNNNNNGC 3 cut(s) 23, 269, 304
BstNI CCWGG 1 cut(s) 50
BstNSI RCATGY 2 cut(s) 15, 113
BstSCI CCNGG 3 cut(s) 48, 193, 441
BstSLI GKGCMC 1 cut(s) 435
BstUI CGCG 2 cut(s) 249, 269
BstX2I RGATCY 1 cut(s) 393
BstYI RGATCY 1 cut(s) 393
BstZI CGGCCG 1 cut(s) 207
BsuRI GGCC 5 cut(s) 59, 79, 152, 209, 272
BtgI CCRYGG 1 cut(s) 267
BtrI CACGTC 1 cut(s) 245
Cac8I GCNNGC 6 cut(s) 13, 28, 44, 61, 65, 187
CfoI GCGC 3 cut(s) 11, 17, 263
Cfr10I RCCGGY 1 cut(s) 307
Cfr13I GGNCC 8 cut(s) 78, 95, 150, 220, 271, 289, 439, 445
Cfr42I CCGCGG 1 cut(s) 270
Csp6I GTAC 1 cut(s) 314
CviAII CATG 2 cut(s) 12, 110
CviQI GTAC 1 cut(s) 314
DinI GGCGCC 1 cut(s) 262
DpnI GATC 1 cut(s) 395
DpnII GATC 1 cut(s) 393
DrdI GACNNNNNNGTC 1 cut(s) 102
DseDI GACNNNNNNGTC 1 cut(s) 102
EaeI YGGCCR 1 cut(s) 207
EagI CGGCCG 1 cut(s) 207
Eam1104I CTCTTC 2 cut(s) 154, 227
EarI CTCTTC 2 cut(s) 154, 227
EciI GGCGGA 1 cut(s) 244
EclXI CGGCCG 1 cut(s) 207
Eco130I CCWWGG 2 cut(s) 98, 337
Eco24I GRGCYC 1 cut(s) 69
Eco31I GGTCTC 1 cut(s) 338
Eco47I GGWCC 5 cut(s) 95, 220, 289, 439, 445
Eco52I CGGCCG 1 cut(s) 207
Eco88I CYCGRG 3 cut(s) 154, 404, 421
EcoO109I RGGNCCY 2 cut(s) 150, 439
EcoRII CCWGG 1 cut(s) 48
EcoT14I CCWWGG 2 cut(s) 98, 337
EcoT38I GRGCYC 1 cut(s) 69
EgeI GGCGCC 1 cut(s) 262
EheI GGCGCC 1 cut(s) 262
ErhI CCWWGG 2 cut(s) 98, 337
Esp3I CGTCTC 2 cut(s) 25, 131
FaeI CATG 2 cut(s) 15, 113
FaiI YATR 3 cut(s) 13, 111, 320
FaqI GGGAC 2 cut(s) 425, 431
FatI CATG 2 cut(s) 11, 109
FauI CCCGC 3 cut(s) 56, 139, 274
FblI GTMKAC 1 cut(s) 106
Fnu4HI GCNGC 2 cut(s) 227, 270
FriOI GRGCYC 1 cut(s) 69
Fsp4HI GCNGC 2 cut(s) 227, 270
GlaI GCGC 3 cut(s) 10, 16, 262
GluI GCNGC 2 cut(s) 227, 270
GsaI CCCAGC 1 cut(s) 432
HaeII RGCGCY 1 cut(s) 264
HaeIII GGCC 5 cut(s) 59, 79, 152, 209, 272
HapII CCGG 7 cut(s) 134, 195, 210, 258, 284, 308, 443
HhaI GCGC 3 cut(s) 11, 17, 263
Hin1I GRCGYC 2 cut(s) 140, 261
Hin1II CATG 2 cut(s) 15, 113
Hin6I GCGC 3 cut(s) 9, 15, 261
HinP1I GCGC 3 cut(s) 9, 15, 261
HincII GTYRAC 2 cut(s) 107, 123
HindII GTYRAC 2 cut(s) 107, 123
HinfI GANTC 3 cut(s) 103, 119, 130
HpaII CCGG 7 cut(s) 134, 195, 210, 258, 284, 308, 443
HphI GGTGA 1 cut(s) 353
Hpy166II GTNNAC 3 cut(s) 107, 123, 344
Hpy188III TCNNGA 5 cut(s) 85, 134, 156, 284, 406
Hpy8I GTNNAC 3 cut(s) 107, 123, 344
Hpy99I CGWCG 3 cut(s) 145, 249, 461
HpyCH4IV ACGT 2 cut(s) 140, 244
HpyF10VI GCNNNNNNNGC 3 cut(s) 23, 269, 304
HpySE526I ACGT 2 cut(s) 140, 244
Hsp92I GRCGYC 2 cut(s) 140, 261
Hsp92II CATG 2 cut(s) 15, 113
HspAI GCGC 3 cut(s) 9, 15, 261
KasI GGCGCC 1 cut(s) 260
KflI GGGWCCC 1 cut(s) 439
Kpn2I TCCGGA 2 cut(s) 133, 283
KspI CCGCGG 1 cut(s) 270
Kzo9I GATC 1 cut(s) 393
LguI GCTCTTC 1 cut(s) 227
LmnI GCTCC 2 cut(s) 51, 72
LweI GCATC 2 cut(s) 45, 335
MaeII ACGT 2 cut(s) 140, 244
MaeIII GTNAC 2 cut(s) 52, 398
MalI GATC 1 cut(s) 395
MboI GATC 1 cut(s) 393
MboII GAAGA 2 cut(s) 171, 244
MflI RGATCY 1 cut(s) 393
MhlI GDGCHC 4 cut(s) 48, 69, 239, 435
Mly113I GGCGCC 1 cut(s) 261
MlyI GAGTC 3 cut(s) 112, 128, 139
MnlI CCTC 6 cut(s) 163, 206, 280, 360, 413, 417
MroI TCCGGA 2 cut(s) 133, 283
MseI TTAA 1 cut(s) 179
MslI CAYNNNNRTG 1 cut(s) 41
MspA1I CMGCKG 2 cut(s) 226, 269
MspI CCGG 7 cut(s) 134, 195, 210, 258, 284, 308, 443
MspR9I CCNGG 3 cut(s) 50, 195, 443
MvaI CCWGG 1 cut(s) 50
MvnI CGCG 2 cut(s) 249, 269
MwoI GCNNNNNNNGC 3 cut(s) 23, 269, 304
NarI GGCGCC 1 cut(s) 261
NciI CCSGG 2 cut(s) 195, 443
NdeII GATC 1 cut(s) 393
NlaIII CATG 2 cut(s) 15, 113
NlaIV GGNNCC 8 cut(s) 68, 151, 221, 262, 395, 440, 441, 447
NmeAIII GCCGAG 1 cut(s) 185
NspI RCATGY 2 cut(s) 15, 113
PaeI GCATGC 1 cut(s) 15
PaeR7I CTCGAG 1 cut(s) 421
PciI ACATGT 1 cut(s) 109
PciSI GCTCTTC 1 cut(s) 227
PcsI WCGNNNNNNNCGW 1 cut(s) 39
PkrI GCNGC 2 cut(s) 228, 271
PleI GAGTC 3 cut(s) 111, 127, 138
PluTI GGCGCC 1 cut(s) 264
PpsI GAGTC 3 cut(s) 111, 127, 138
PpuMI RGGWCCY 1 cut(s) 439
PscI ACATGT 1 cut(s) 109
Psp5II RGGWCCY 1 cut(s) 439
Psp6I CCWGG 1 cut(s) 48
PspFI CCCAGC 1 cut(s) 428
PspGI CCWGG 1 cut(s) 48
PspN4I GGNNCC 8 cut(s) 68, 151, 221, 262, 395, 440, 441, 447
PspPI GGNCC 8 cut(s) 78, 95, 150, 220, 271, 289, 439, 445
PspPPI RGGWCCY 1 cut(s) 439
PspXI VCTCGAGB 1 cut(s) 421
PsuI RGATCY 1 cut(s) 393
RsaI GTAC 1 cut(s) 315
RsaNI GTAC 1 cut(s) 314
RseI CAYNNNNRTG 1 cut(s) 41
SacII CCGCGG 1 cut(s) 270
SalI GTCGAC 1 cut(s) 105
SapI GCTCTTC 1 cut(s) 227
SaqAI TTAA 1 cut(s) 179
SatI GCNGC 2 cut(s) 227, 270
Sau3AI GATC 1 cut(s) 393
Sau96I GGNCC 8 cut(s) 78, 95, 150, 220, 271, 289, 439, 445
SchI GAGTC 3 cut(s) 112, 128, 139
ScrFI CCNGG 3 cut(s) 50, 195, 443
SduI GDGCHC 4 cut(s) 48, 69, 239, 435
SetI ASST 6 cut(s) 143, 217, 247, 334, 343, 405
SfaNI GCATC 2 cut(s) 45, 335
SfoI GGCGCC 1 cut(s) 262
Sfr274I CTCGAG 1 cut(s) 421
Sfr303I CCGCGG 1 cut(s) 270
SgrBI CCGCGG 1 cut(s) 270
SinI GGWCC 5 cut(s) 95, 220, 289, 439, 445
SlaI CTCGAG 1 cut(s) 421
SmiMI CAYNNNNRTG 1 cut(s) 41
SmlI CTYRAG 1 cut(s) 421
SmoI CTYRAG 1 cut(s) 421
SphI GCATGC 1 cut(s) 15
SsiI CCGC 8 cut(s) 63, 146, 226, 229, 240, 267, 269, 324
SspDI GGCGCC 1 cut(s) 260
StyD4I CCNGG 3 cut(s) 48, 193, 441
StyI CCWWGG 2 cut(s) 98, 337
TaiI ACGT 2 cut(s) 143, 247
TaqI TCGA 2 cut(s) 106, 422
TaqII GACCGA 2 cut(s) 306, 342
TauI GCSGC 2 cut(s) 229, 272
Tru1I TTAA 1 cut(s) 179
Tru9I TTAA 1 cut(s) 179
TspGWI ACGGA 2 cut(s) 108, 386
VpaK11BI GGWCC 5 cut(s) 95, 220, 289, 439, 445
XceI RCATGY 2 cut(s) 15, 113
XhoI CTCGAG 1 cut(s) 421
XmiI GTMKAC 1 cut(s) 106
ZraI GACGTC 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.