Rroxscaffold_115G00451690

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000115
OG0000104
Physical Location & Seq
Reverse (-)
44 .. 860
817 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_115G00451690.1

Sequence Viewer

Length: 411 bp
ATGGCGCTTAAGCGCGTGACCTATACCGGCCGTCCGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCCGGGCGGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGATTGGCTCGAGGGCTGGGCACGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGCGTTCAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

136

Amino Acids

14.87

Weight (kDa)

11.15

Isoelectric Point (pI)

57.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 112, 300
AccI GTMKAC 1 cut(s) 370
AccII CGCG 4 cut(s) 15, 70, 291, 310
AciI CCGC 8 cut(s) 70, 73, 106, 112, 289, 291, 300, 308
AcoI YGGCCR 3 cut(s) 28, 113, 316
AfaI GTAC 1 cut(s) 385
AfiI CCNNNNNNNGG 2 cut(s) 177, 314
AflII CTTAAG 1 cut(s) 8
AgsI TTSAA 3 cut(s) 152, 166, 364
AjnI CCWGG 2 cut(s) 45, 87
AluBI AGCT 1 cut(s) 282
AluI AGCT 1 cut(s) 282
Ama87I CYCGRG 3 cut(s) 101, 221, 277
AoxI GGCC 5 cut(s) 28, 48, 113, 168, 316
ApeKI GCWGC 2 cut(s) 79, 282
AspLEI GCGC 3 cut(s) 7, 15, 70
AspS9I GGNCC 2 cut(s) 49, 239
AsuC2I CCSGG 5 cut(s) 36, 102, 103, 320, 356
AsuHPI GGTGA 1 cut(s) 280
AvaI CYCGRG 3 cut(s) 101, 221, 277
AvaII GGWCC 1 cut(s) 239
BaeGI GKGCMC 1 cut(s) 235
BanII GRGCYC 1 cut(s) 102
BbvI GCAGC 2 cut(s) 66, 269
BceAI ACGGC 3 cut(s) 15, 100, 214
BciT130I CCWGG 2 cut(s) 47, 89
BcnI CCSGG 5 cut(s) 36, 102, 103, 320, 356
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 8
BglI GCCNNNNNGGC 1 cut(s) 36
BglII AGATCT 1 cut(s) 126
BisI GCNGC 6 cut(s) 71, 80, 113, 283, 292, 308
BlsI GCNGC 6 cut(s) 72, 81, 114, 284, 293, 309
Bme1390I CCNGG 7 cut(s) 36, 47, 89, 102, 103, 320, 356
Bme18I GGWCC 1 cut(s) 239
BmeT110I CYCGRG 3 cut(s) 101, 221, 277
BmgT120I GGNCC 2 cut(s) 49, 239
BmiI GGNNCC 4 cut(s) 51, 188, 240, 241
BmrFI CCNGG 7 cut(s) 36, 47, 89, 102, 103, 320, 356
BmrI ACTGGG 2 cut(s) 237, 339
BmuI ACTGGG 2 cut(s) 237, 339
BpuMI CCSGG 5 cut(s) 36, 102, 103, 320, 356
BsaJI CCNNGG 4 cut(s) 88, 101, 289, 319
BsaXI ACNNNNNCTCC 2 cut(s) 101, 131
Bsc4I CCNNNNNNNGG 2 cut(s) 177, 314
Bse118I RCCGGY 2 cut(s) 26, 314
Bse1I ACTGG 3 cut(s) 243, 334, 385
BseBI CCWGG 2 cut(s) 47, 89
BseDI CCNNGG 4 cut(s) 88, 101, 289, 319
BseLI CCNNNNNNNGG 2 cut(s) 177, 314
BseMII CTCAG 1 cut(s) 388
BseNI ACTGG 3 cut(s) 243, 334, 385
BseSI GKGCMC 1 cut(s) 235
BseX3I CGGCCG 3 cut(s) 28, 113, 316
BseXI GCAGC 2 cut(s) 66, 269
BseYI CCCAGC 1 cut(s) 228
BsgI GTGCAG 1 cut(s) 143
Bsh1236I CGCG 4 cut(s) 15, 70, 291, 310
Bsh1285I CGRYCG 4 cut(s) 31, 77, 116, 319
BshFI GGCC 5 cut(s) 30, 50, 115, 170, 318
BsiEI CGRYCG 4 cut(s) 31, 77, 116, 319
BsiHKCI CYCGRG 3 cut(s) 101, 221, 277
BsiSI CCGG 6 cut(s) 27, 35, 102, 315, 319, 356
BslFI GGGAC 3 cut(s) 225, 231, 336
BslI CCNNNNNNNGG 2 cut(s) 177, 314
BsmFI GGGAC 3 cut(s) 225, 231, 336
BsnI GGCC 5 cut(s) 30, 50, 115, 170, 318
BsoBI CYCGRG 3 cut(s) 101, 221, 277
Bsp1286I GDGCHC 2 cut(s) 102, 235
Bsp143I GATC 1 cut(s) 126
BspACI CCGC 8 cut(s) 70, 73, 106, 112, 289, 291, 300, 308
BspANI GGCC 5 cut(s) 30, 50, 115, 170, 318
BspCNI CTCAG 1 cut(s) 387
BspFNI CGCG 4 cut(s) 15, 70, 291, 310
BspLI GGNNCC 4 cut(s) 51, 188, 240, 241
BspTI CTTAAG 1 cut(s) 8
BsrBI CCGCTC 2 cut(s) 112, 300
BsrFI RCCGGY 2 cut(s) 26, 314
BsrI ACTGG 3 cut(s) 243, 334, 385
BssAI RCCGGY 2 cut(s) 26, 314
BssECI CCNNGG 4 cut(s) 88, 101, 289, 319
BssMI GATC 1 cut(s) 126
Bst2UI CCWGG 2 cut(s) 47, 89
Bst4CI ACNGT 2 cut(s) 368, 406
BstAFI CTTAAG 1 cut(s) 8
BstC8I GCNNGC 2 cut(s) 312, 316
BstDEI CTNAG 1 cut(s) 374
BstDSI CCRYGG 1 cut(s) 289
BstFNI CGCG 4 cut(s) 15, 70, 291, 310
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 3 cut(s) 7, 15, 70
BstKTI GATC 1 cut(s) 129
BstMBI GATC 1 cut(s) 126
BstMCI CGRYCG 4 cut(s) 31, 77, 116, 319
BstNI CCWGG 2 cut(s) 47, 89
BstSCI CCNGG 7 cut(s) 34, 45, 87, 100, 101, 318, 354
BstSLI GKGCMC 1 cut(s) 235
BstUI CGCG 4 cut(s) 15, 70, 291, 310
BstV1I GCAGC 2 cut(s) 66, 269
BstX2I RGATCY 1 cut(s) 126
BstYI RGATCY 1 cut(s) 126
BstZI CGGCCG 3 cut(s) 28, 113, 316
BsuRI GGCC 5 cut(s) 30, 50, 115, 170, 318
BtgI CCRYGG 1 cut(s) 289
Cac8I GCNNGC 2 cut(s) 312, 316
CfoI GCGC 3 cut(s) 7, 15, 70
Cfr10I RCCGGY 2 cut(s) 26, 314
Cfr13I GGNCC 2 cut(s) 49, 239
Cfr42I CCGCGG 1 cut(s) 292
Cfr9I CCCGGG 1 cut(s) 101
Csp6I GTAC 1 cut(s) 384
CviAII CATG 2 cut(s) 191, 210
CviQI GTAC 1 cut(s) 384
DdeI CTNAG 1 cut(s) 374
DpnI GATC 1 cut(s) 128
DpnII GATC 1 cut(s) 126
EaeI YGGCCR 3 cut(s) 28, 113, 316
EagI CGGCCG 3 cut(s) 28, 113, 316
EclXI CGGCCG 3 cut(s) 28, 113, 316
Eco24I GRGCYC 1 cut(s) 102
Eco47I GGWCC 1 cut(s) 239
Eco52I CGGCCG 3 cut(s) 28, 113, 316
Eco88I CYCGRG 3 cut(s) 101, 221, 277
EcoO109I RGGNCCY 2 cut(s) 49, 239
EcoRII CCWGG 2 cut(s) 45, 87
EcoT38I GRGCYC 1 cut(s) 102
FaeI CATG 2 cut(s) 194, 213
FaiI YATR 3 cut(s) 24, 192, 211
FaqI GGGAC 3 cut(s) 225, 231, 336
FatI CATG 2 cut(s) 190, 209
FauI CCCGC 2 cut(s) 99, 293
FblI GTMKAC 1 cut(s) 370
Fnu4HI GCNGC 6 cut(s) 71, 80, 113, 283, 292, 308
FriOI GRGCYC 1 cut(s) 102
Fsp4HI GCNGC 6 cut(s) 71, 80, 113, 283, 292, 308
GlaI GCGC 3 cut(s) 6, 14, 69
GluI GCNGC 6 cut(s) 71, 80, 113, 283, 292, 308
GsaI CCCAGC 1 cut(s) 232
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 5 cut(s) 30, 50, 115, 170, 318
HapII CCGG 6 cut(s) 27, 35, 102, 315, 319, 356
HhaI GCGC 3 cut(s) 7, 15, 70
Hin1II CATG 2 cut(s) 194, 213
Hin6I GCGC 3 cut(s) 5, 13, 68
HinP1I GCGC 3 cut(s) 5, 13, 68
HincII GTYRAC 1 cut(s) 371
HindII GTYRAC 1 cut(s) 371
HinfI GANTC 2 cut(s) 372, 397
HpaII CCGG 6 cut(s) 27, 35, 102, 315, 319, 356
HphI GGTGA 1 cut(s) 280
Hpy166II GTNNAC 3 cut(s) 196, 271, 371
Hpy188I TCNGA 2 cut(s) 377, 402
Hpy188III TCNNGA 1 cut(s) 248
Hpy8I GTNNAC 3 cut(s) 196, 271, 371
Hpy99I CGWCG 2 cut(s) 121, 260
HpyAV CCTTC 3 cut(s) 160, 170, 351
HpyCH4III ACNGT 2 cut(s) 368, 406
HpyCH4V TGCA 3 cut(s) 82, 124, 207
HpyF3I CTNAG 1 cut(s) 374
Hsp92II CATG 2 cut(s) 194, 213
HspAI GCGC 3 cut(s) 5, 13, 68
KflI GGGWCCC 1 cut(s) 239
KroI GCCGGC 1 cut(s) 314
KroNI GCCGGC 1 cut(s) 316
KspI CCGCGG 1 cut(s) 292
Kzo9I GATC 1 cut(s) 126
LmnI GCTCC 2 cut(s) 109, 343
Lsp1109I GCAGC 2 cut(s) 66, 269
MaeIII GTNAC 1 cut(s) 16
MalI GATC 1 cut(s) 128
MbiI CCGCTC 2 cut(s) 112, 300
MboI GATC 1 cut(s) 126
MboII GAAGA 1 cut(s) 185
MflI RGATCY 1 cut(s) 126
MhlI GDGCHC 2 cut(s) 102, 235
MlyI GAGTC 1 cut(s) 366
MnlI CCTC 2 cut(s) 57, 217
MroNI GCCGGC 1 cut(s) 314
MseI TTAA 2 cut(s) 9, 409
MspA1I CMGCKG 1 cut(s) 291
MspCI CTTAAG 1 cut(s) 8
MspI CCGG 6 cut(s) 27, 35, 102, 315, 319, 356
MspR9I CCNGG 7 cut(s) 36, 47, 89, 102, 103, 320, 356
MvaI CCWGG 2 cut(s) 47, 89
MvnI CGCG 4 cut(s) 15, 70, 291, 310
NaeI GCCGGC 1 cut(s) 316
NciI CCSGG 5 cut(s) 36, 102, 103, 320, 356
NdeII GATC 1 cut(s) 126
NgoMIV GCCGGC 1 cut(s) 314
NlaIII CATG 2 cut(s) 194, 213
NlaIV GGNNCC 4 cut(s) 51, 188, 240, 241
NmuCI GTSAC 1 cut(s) 16
PaeR7I CTCGAG 2 cut(s) 221, 277
PdiI GCCGGC 1 cut(s) 316
PfeI GAWTC 1 cut(s) 397
PkrI GCNGC 6 cut(s) 72, 81, 114, 284, 293, 309
PleI GAGTC 1 cut(s) 366
PpsI GAGTC 1 cut(s) 366
PpuMI RGGWCCY 1 cut(s) 239
Psp5II RGGWCCY 1 cut(s) 239
Psp6I CCWGG 2 cut(s) 45, 87
PspFI CCCAGC 1 cut(s) 228
PspGI CCWGG 2 cut(s) 45, 87
PspN4I GGNNCC 4 cut(s) 51, 188, 240, 241
PspPI GGNCC 2 cut(s) 49, 239
PspPPI RGGWCCY 1 cut(s) 239
PspXI VCTCGAGB 2 cut(s) 221, 277
PsuI RGATCY 1 cut(s) 126
RsaI GTAC 1 cut(s) 385
RsaNI GTAC 1 cut(s) 384
SacII CCGCGG 1 cut(s) 292
SalI GTCGAC 1 cut(s) 369
SaqAI TTAA 2 cut(s) 9, 409
SatI GCNGC 6 cut(s) 71, 80, 113, 283, 292, 308
Sau3AI GATC 1 cut(s) 126
Sau96I GGNCC 2 cut(s) 49, 239
SchI GAGTC 1 cut(s) 366
ScrFI CCNGG 7 cut(s) 36, 47, 89, 102, 103, 320, 356
SduI GDGCHC 2 cut(s) 102, 235
SetI ASST 4 cut(s) 23, 90, 188, 284
Sfr274I CTCGAG 2 cut(s) 221, 277
Sfr303I CCGCGG 1 cut(s) 292
SgrBI CCGCGG 1 cut(s) 292
SinI GGWCC 1 cut(s) 239
SlaI CTCGAG 2 cut(s) 221, 277
SmaI CCCGGG 1 cut(s) 103
SmlI CTYRAG 3 cut(s) 8, 221, 277
SmoI CTYRAG 3 cut(s) 8, 221, 277
SrfI GCCCGGGC 1 cut(s) 103
SsiI CCGC 8 cut(s) 70, 73, 106, 112, 289, 291, 300, 308
SspI AATATT 1 cut(s) 148
StyD4I CCNGG 7 cut(s) 34, 45, 87, 100, 101, 318, 354
TaaI ACNGT 2 cut(s) 368, 406
TaqI TCGA 3 cut(s) 222, 278, 370
TauI GCSGC 4 cut(s) 73, 115, 294, 310
TfiI GAWTC 1 cut(s) 397
Tru1I TTAA 2 cut(s) 9, 409
Tru9I TTAA 2 cut(s) 9, 409
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 2 cut(s) 79, 282
Tsp45I GTSAC 1 cut(s) 16
TspGWI ACGGA 2 cut(s) 340, 401
TspMI CCCGGG 1 cut(s) 101
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 1 cut(s) 239
XhoI CTCGAG 2 cut(s) 221, 277
XmaI CCCGGG 1 cut(s) 101
XmiI GTMKAC 1 cut(s) 370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.