Rroxscaffold_48G00448510

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000048
OG0000104
Physical Location & Seq
Reverse (-)
54920 .. 55732
813 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_48G00448510.1

Sequence Viewer

Length: 486 bp
ATGGCGCTTAAGCGCGTGACCTATACCGGCCGTCGGGGCAAGTGCCGAGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACACAGGGCGTGAGCCGGGCGGAGCGGCCGTCGGTGCGGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTGAACGACCTGCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGCTGGGCACGGGGGTCCCGATCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTCCGCGGCGAGAGCGGGTCGCCGCGTGCGGCCGGGGGACGGACGGGAACGCTCCTTCGGGGGCTTTCCCCGGGCGTTCAACGGTCGACTCGGGCTGGTACGGACAAGGGGAATCCGATTGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

161

Amino Acids

17.95

Weight (kDa)

11.84

Isoelectric Point (pI)

56.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 228
AccBSI CCGCTC 2 cut(s) 110, 371
AccI GTMKAC 1 cut(s) 442
AccII CGCG 4 cut(s) 15, 70, 362, 381
AclWI GGATC 4 cut(s) 132, 259, 272, 312
AcoI YGGCCR 3 cut(s) 28, 111, 386
AfaI GTAC 1 cut(s) 456
AfiI CCNNNNNNNGG 3 cut(s) 33, 175, 395
AflII CTTAAG 1 cut(s) 8
AgsI TTSAA 3 cut(s) 150, 164, 436
AhdI GACNNNNNGTC 1 cut(s) 223
AleI CACNNNNGTG 1 cut(s) 209
AluBI AGCT 1 cut(s) 354
AluI AGCT 1 cut(s) 354
AlwI GGATC 4 cut(s) 132, 259, 272, 312
Ama87I CYCGRG 4 cut(s) 275, 349, 426, 446
AoxI GGCC 4 cut(s) 28, 111, 166, 386
ApeKI GCWGC 3 cut(s) 79, 291, 354
AspLEI GCGC 3 cut(s) 7, 15, 70
AspS9I GGNCC 1 cut(s) 312
AsuC2I CCSGG 4 cut(s) 102, 390, 427, 428
AsuHPI GGTGA 2 cut(s) 223, 352
AvaI CYCGRG 4 cut(s) 275, 349, 426, 446
AvaII GGWCC 1 cut(s) 312
BaeGI GKGCMC 1 cut(s) 307
BamHI GGATCC 1 cut(s) 264
BanII GRGCYC 1 cut(s) 52
BbvI GCAGC 3 cut(s) 66, 278, 341
BceAI ACGGC 3 cut(s) 15, 98, 211
BcnI CCSGG 4 cut(s) 102, 390, 427, 428
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 8
BfuAI ACCTGC 1 cut(s) 228
BglI GCCNNNNNGGC 1 cut(s) 36
BisI GCNGC 8 cut(s) 71, 80, 111, 292, 355, 363, 379, 386
BlsI GCNGC 8 cut(s) 72, 81, 112, 293, 356, 364, 380, 387
Bme1390I CCNGG 4 cut(s) 102, 390, 427, 428
Bme18I GGWCC 1 cut(s) 312
BmeRI GACNNNNNGTC 1 cut(s) 223
BmeT110I CYCGRG 4 cut(s) 275, 349, 426, 446
BmgT120I GGNCC 1 cut(s) 312
BmiI GGNNCC 4 cut(s) 185, 266, 313, 314
BmrFI CCNGG 4 cut(s) 102, 390, 427, 428
BpuMI CCSGG 4 cut(s) 102, 390, 427, 428
BsaJI CCNNGG 5 cut(s) 274, 360, 389, 425, 426
BsaXI ACNNNNNCTCC 2 cut(s) 99, 129
Bsc4I CCNNNNNNNGG 3 cut(s) 33, 175, 395
Bse118I RCCGGY 1 cut(s) 26
BseDI CCNNGG 5 cut(s) 274, 360, 389, 425, 426
BseLI CCNNNNNNNGG 3 cut(s) 33, 175, 395
BseSI GKGCMC 1 cut(s) 307
BseX3I CGGCCG 3 cut(s) 28, 111, 386
BseXI GCAGC 3 cut(s) 66, 278, 341
BseYI CCCAGC 1 cut(s) 300
Bsh1236I CGCG 4 cut(s) 15, 70, 362, 381
Bsh1285I CGRYCG 5 cut(s) 31, 77, 114, 389, 442
BshFI GGCC 4 cut(s) 30, 113, 168, 388
BsiEI CGRYCG 5 cut(s) 31, 77, 114, 389, 442
BsiHKCI CYCGRG 4 cut(s) 275, 349, 426, 446
BsiSI CCGG 4 cut(s) 27, 101, 389, 427
BslFI GGGAC 2 cut(s) 298, 407
BslI CCNNNNNNNGG 3 cut(s) 33, 175, 395
BsmFI GGGAC 2 cut(s) 298, 407
BsnI GGCC 4 cut(s) 30, 113, 168, 388
BsoBI CYCGRG 4 cut(s) 275, 349, 426, 446
Bsp1286I GDGCHC 2 cut(s) 52, 307
Bsp143I GATC 3 cut(s) 124, 264, 317
BspANI GGCC 4 cut(s) 30, 113, 168, 388
BspFNI CGCG 4 cut(s) 15, 70, 362, 381
BspLI GGNNCC 4 cut(s) 185, 266, 313, 314
BspMI ACCTGC 1 cut(s) 228
BspPI GGATC 4 cut(s) 132, 259, 272, 312
BspTI CTTAAG 1 cut(s) 8
BsrBI CCGCTC 2 cut(s) 110, 371
BsrFI RCCGGY 1 cut(s) 26
BssAI RCCGGY 1 cut(s) 26
BssECI CCNNGG 5 cut(s) 274, 360, 389, 425, 426
BssMI GATC 3 cut(s) 124, 264, 317
Bst4CI ACNGT 1 cut(s) 440
Bst6I CTCTTC 1 cut(s) 166
BstAFI CTTAAG 1 cut(s) 8
BstC8I GCNNGC 1 cut(s) 383
BstDSI CCRYGG 1 cut(s) 360
BstFNI CGCG 4 cut(s) 15, 70, 362, 381
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 3 cut(s) 7, 15, 70
BstKTI GATC 3 cut(s) 127, 267, 320
BstMBI GATC 3 cut(s) 124, 264, 317
BstMCI CGRYCG 5 cut(s) 31, 77, 114, 389, 442
BstMWI GCNNNNNNNGC 7 cut(s) 36, 76, 79, 119, 297, 354, 368
BstSCI CCNGG 4 cut(s) 100, 388, 425, 426
BstSLI GKGCMC 1 cut(s) 307
BstUI CGCG 4 cut(s) 15, 70, 362, 381
BstV1I GCAGC 3 cut(s) 66, 278, 341
BstX2I RGATCY 2 cut(s) 124, 264
BstYI RGATCY 2 cut(s) 124, 264
BstZI CGGCCG 3 cut(s) 28, 111, 386
BsuRI GGCC 4 cut(s) 30, 113, 168, 388
BtgI CCRYGG 1 cut(s) 360
BveI ACCTGC 1 cut(s) 228
Cac8I GCNNGC 1 cut(s) 383
CfoI GCGC 3 cut(s) 7, 15, 70
Cfr10I RCCGGY 1 cut(s) 26
Cfr13I GGNCC 1 cut(s) 312
Cfr42I CCGCGG 1 cut(s) 363
Cfr9I CCCGGG 1 cut(s) 426
Csp6I GTAC 1 cut(s) 455
CviAII CATG 2 cut(s) 188, 207
CviQI GTAC 1 cut(s) 455
DpnI GATC 3 cut(s) 126, 266, 319
DpnII GATC 3 cut(s) 124, 264, 317
DriI GACNNNNNGTC 1 cut(s) 223
EaeI YGGCCR 3 cut(s) 28, 111, 386
EagI CGGCCG 3 cut(s) 28, 111, 386
Eam1104I CTCTTC 1 cut(s) 166
Eam1105I GACNNNNNGTC 1 cut(s) 223
EarI CTCTTC 1 cut(s) 166
EciI GGCGGA 1 cut(s) 120
EclXI CGGCCG 3 cut(s) 28, 111, 386
Eco24I GRGCYC 1 cut(s) 52
Eco47I GGWCC 1 cut(s) 312
Eco52I CGGCCG 3 cut(s) 28, 111, 386
Eco88I CYCGRG 4 cut(s) 275, 349, 426, 446
EcoO109I RGGNCCY 1 cut(s) 312
EcoT38I GRGCYC 1 cut(s) 52
FaeI CATG 2 cut(s) 191, 210
FaiI YATR 3 cut(s) 24, 189, 208
FaqI GGGAC 2 cut(s) 298, 407
FatI CATG 2 cut(s) 187, 206
FauI CCCGC 1 cut(s) 364
FblI GTMKAC 1 cut(s) 442
Fnu4HI GCNGC 8 cut(s) 71, 80, 111, 292, 355, 363, 379, 386
FriOI GRGCYC 1 cut(s) 52
Fsp4HI GCNGC 8 cut(s) 71, 80, 111, 292, 355, 363, 379, 386
GlaI GCGC 3 cut(s) 6, 14, 69
GluI GCNGC 8 cut(s) 71, 80, 111, 292, 355, 363, 379, 386
GsaI CCCAGC 1 cut(s) 304
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 4 cut(s) 30, 113, 168, 388
HapII CCGG 4 cut(s) 27, 101, 389, 427
HhaI GCGC 3 cut(s) 7, 15, 70
Hin1II CATG 2 cut(s) 191, 210
Hin6I GCGC 3 cut(s) 5, 13, 68
HinP1I GCGC 3 cut(s) 5, 13, 68
HincII GTYRAC 1 cut(s) 443
HindII GTYRAC 1 cut(s) 443
HinfI GANTC 2 cut(s) 444, 468
HpaII CCGG 4 cut(s) 27, 101, 389, 427
HphI GGTGA 2 cut(s) 223, 352
Hpy166II GTNNAC 4 cut(s) 193, 214, 343, 443
Hpy188I TCNGA 1 cut(s) 473
Hpy188III TCNNGA 3 cut(s) 277, 315, 321
Hpy8I GTNNAC 4 cut(s) 193, 214, 343, 443
Hpy99I CGWCG 3 cut(s) 36, 119, 333
HpyAV CCTTC 2 cut(s) 158, 421
HpyCH4III ACNGT 1 cut(s) 440
HpyCH4V TGCA 2 cut(s) 82, 204
HpyF10VI GCNNNNNNNGC 7 cut(s) 36, 76, 79, 119, 297, 354, 368
Hsp92II CATG 2 cut(s) 191, 210
HspAI GCGC 3 cut(s) 5, 13, 68
KflI GGGWCCC 1 cut(s) 312
KspI CCGCGG 1 cut(s) 363
Kzo9I GATC 3 cut(s) 124, 264, 317
LmnI GCTCC 3 cut(s) 107, 362, 413
LpnPI CCDG 8 cut(s) 40, 75, 114, 233, 286, 402, 437, 440
Lsp1109I GCAGC 3 cut(s) 66, 278, 341
MaeIII GTNAC 2 cut(s) 16, 269
MalI GATC 3 cut(s) 126, 266, 319
MbiI CCGCTC 2 cut(s) 110, 371
MboI GATC 3 cut(s) 124, 264, 317
MboII GAAGA 1 cut(s) 183
MflI RGATCY 2 cut(s) 124, 264
MhlI GDGCHC 2 cut(s) 52, 307
MluCI AATT 1 cut(s) 481
MlyI GAGTC 1 cut(s) 438
MnlI CCTC 4 cut(s) 57, 167, 284, 289
MseI TTAA 3 cut(s) 9, 480, 484
MslI CAYNNNNRTG 1 cut(s) 209
MspA1I CMGCKG 1 cut(s) 362
MspCI CTTAAG 1 cut(s) 8
MspI CCGG 4 cut(s) 27, 101, 389, 427
MspR9I CCNGG 4 cut(s) 102, 390, 427, 428
MvnI CGCG 4 cut(s) 15, 70, 362, 381
MwoI GCNNNNNNNGC 7 cut(s) 36, 76, 79, 119, 297, 354, 368
NciI CCSGG 4 cut(s) 102, 390, 427, 428
NdeII GATC 3 cut(s) 124, 264, 317
NlaIII CATG 2 cut(s) 191, 210
NlaIV GGNNCC 4 cut(s) 185, 266, 313, 314
NmeAIII GCCGAG 1 cut(s) 71
NmuCI GTSAC 1 cut(s) 16
OliI CACNNNNGTG 1 cut(s) 209
PacI TTAATTAA 1 cut(s) 484
PaeR7I CTCGAG 1 cut(s) 349
PcsI WCGNNNNNNNCGW 1 cut(s) 313
PfeI GAWTC 1 cut(s) 468
PkrI GCNGC 8 cut(s) 72, 81, 112, 293, 356, 364, 380, 387
PleI GAGTC 1 cut(s) 438
PpsI GAGTC 1 cut(s) 438
PpuMI RGGWCCY 1 cut(s) 312
Psp5II RGGWCCY 1 cut(s) 312
PspFI CCCAGC 1 cut(s) 300
PspN4I GGNNCC 4 cut(s) 185, 266, 313, 314
PspPI GGNCC 1 cut(s) 312
PspPPI RGGWCCY 1 cut(s) 312
PspXI VCTCGAGB 1 cut(s) 349
PsuI RGATCY 2 cut(s) 124, 264
RsaI GTAC 1 cut(s) 456
RsaNI GTAC 1 cut(s) 455
RseI CAYNNNNRTG 1 cut(s) 209
SacII CCGCGG 1 cut(s) 363
SalI GTCGAC 1 cut(s) 441
SaqAI TTAA 3 cut(s) 9, 480, 484
SatI GCNGC 8 cut(s) 71, 80, 111, 292, 355, 363, 379, 386
Sau3AI GATC 3 cut(s) 124, 264, 317
Sau96I GGNCC 1 cut(s) 312
SchI GAGTC 1 cut(s) 438
ScrFI CCNGG 4 cut(s) 102, 390, 427, 428
SduI GDGCHC 2 cut(s) 52, 307
SetI ASST 5 cut(s) 23, 185, 222, 276, 356
Sfr274I CTCGAG 1 cut(s) 349
Sfr303I CCGCGG 1 cut(s) 363
SgrBI CCGCGG 1 cut(s) 363
SinI GGWCC 1 cut(s) 312
SlaI CTCGAG 1 cut(s) 349
SmaI CCCGGG 1 cut(s) 428
SmiMI CAYNNNNRTG 1 cut(s) 209
SmlI CTYRAG 2 cut(s) 8, 349
SmoI CTYRAG 2 cut(s) 8, 349
Sse9I AATT 1 cut(s) 481
SspI AATATT 1 cut(s) 146
StyD4I CCNGG 4 cut(s) 100, 388, 425, 426
TaaI ACNGT 1 cut(s) 440
TaqI TCGA 2 cut(s) 350, 442
TasI AATT 1 cut(s) 481
TauI GCSGC 5 cut(s) 73, 113, 365, 381, 388
TfiI GAWTC 1 cut(s) 468
Tru1I TTAA 3 cut(s) 9, 480, 484
Tru9I TTAA 3 cut(s) 9, 480, 484
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 3 cut(s) 79, 291, 354
Tsp45I GTSAC 1 cut(s) 16
TspGWI ACGGA 3 cut(s) 257, 411, 472
TspMI CCCGGG 1 cut(s) 426
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 1 cut(s) 312
XhoI CTCGAG 1 cut(s) 349
XmaI CCCGGG 1 cut(s) 426
XmiI GTMKAC 1 cut(s) 442
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.