Rroxscaffold_53G00449700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000053
OG0000104
Physical Location & Seq
Forward (+)
19540 .. 20301
762 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_53G00449700.1

Sequence Viewer

Length: 513 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCCGGGGCGTGAGCCCGGCGGAGCGGCCGTCGGTGCAGAGATCTTGGTGCCTGCCCACCCCGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGTCGTACTCATAACCGCATCAGTCTCCAAGGTGAACAGCCTCTGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGAAAAGGATTGGCTCGAGGGCTGGGCACGGGGTCCCGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACCGGGAACGCTCCTTCGGGGCTTTCCCCGGCGTTCAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACCGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

170

Amino Acids

18.39

Weight (kDa)

11.51

Isoelectric Point (pI)

67.22

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 79, 169
AccBSI CCGCTC 2 cut(s) 56, 397
AccI GTMKAC 1 cut(s) 468
AccII CGCG 4 cut(s) 16, 148, 388, 407
AccIII TCCGGA 1 cut(s) 183
AclWI GGATC 2 cut(s) 288, 301
AcoI YGGCCR 3 cut(s) 57, 125, 413
AcyI GRCGYC 1 cut(s) 170
AfaI GTAC 2 cut(s) 216, 483
AfiI CCNNNNNNNGG 6 cut(s) 98, 114, 127, 411, 418, 422
AgsI TTSAA 2 cut(s) 178, 462
AjiI CACGTC 1 cut(s) 144
AluBI AGCT 1 cut(s) 379
AluI AGCT 1 cut(s) 379
Alw21I GWGCWC 1 cut(s) 138
Alw26I GTCTC 1 cut(s) 238
AlwI GGATC 2 cut(s) 288, 301
AlwNI CAGNNNCTG 1 cut(s) 252
Ama87I CYCGRG 3 cut(s) 34, 320, 374
Aor13HI TCCGGA 1 cut(s) 183
AoxI GGCC 3 cut(s) 57, 125, 413
ApeKI GCWGC 2 cut(s) 25, 379
AspLEI GCGC 3 cut(s) 16, 164, 172
AspS9I GGNCC 4 cut(s) 118, 189, 338, 425
AsuC2I CCSGG 9 cut(s) 35, 36, 48, 93, 167, 209, 417, 429, 454
AsuHPI GGTGA 2 cut(s) 253, 377
AvaI CYCGRG 3 cut(s) 34, 320, 374
AvaII GGWCC 4 cut(s) 118, 189, 338, 425
BaeGI GKGCMC 1 cut(s) 334
BamHI GGATCC 1 cut(s) 293
BanI GGYRCC 2 cut(s) 79, 169
BanII GRGCYC 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 138
BbvI GCAGC 2 cut(s) 12, 366
BceAI ACGGC 2 cut(s) 44, 115
BcnI CCSGG 9 cut(s) 35, 36, 48, 93, 167, 209, 417, 429, 454
BcoDI GTCTC 1 cut(s) 238
BfoI RGCGCY 1 cut(s) 173
BglII AGATCT 1 cut(s) 72
BisI GCNGC 7 cut(s) 17, 26, 57, 125, 380, 389, 405
BlpI GCTNAGC 1 cut(s) 103
BlsI GCNGC 7 cut(s) 18, 27, 58, 126, 381, 390, 406
Bme1390I CCNGG 9 cut(s) 35, 36, 48, 93, 167, 209, 417, 429, 454
Bme18I GGWCC 4 cut(s) 118, 189, 338, 425
BmeT110I CYCGRG 3 cut(s) 34, 320, 374
BmgBI CACGTC 1 cut(s) 144
BmgT120I GGNCC 4 cut(s) 118, 189, 338, 425
BmiI GGNNCC 6 cut(s) 81, 119, 171, 295, 339, 340
BmrFI CCNGG 9 cut(s) 35, 36, 48, 93, 167, 209, 417, 429, 454
BmsI GCATC 1 cut(s) 236
Bpu1102I GCTNAGC 1 cut(s) 103
BpuMI CCSGG 9 cut(s) 35, 36, 48, 93, 167, 209, 417, 429, 454
BsaHI GRCGYC 1 cut(s) 170
BsaJI CCNNGG 9 cut(s) 34, 35, 91, 165, 237, 303, 386, 416, 452
BsaWI WCCGGW 2 cut(s) 156, 183
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 102, 132
Bsc4I CCNNNNNNNGG 6 cut(s) 98, 114, 127, 411, 418, 422
Bse118I RCCGGY 1 cut(s) 411
Bse1I ACTGG 1 cut(s) 483
BseAI TCCGGA 1 cut(s) 183
BseDI CCNNGG 9 cut(s) 34, 35, 91, 165, 237, 303, 386, 416, 452
BseLI CCNNNNNNNGG 6 cut(s) 98, 114, 127, 411, 418, 422
BseMII CTCAG 2 cut(s) 117, 486
BseNI ACTGG 1 cut(s) 483
BseSI GKGCMC 1 cut(s) 334
BseX3I CGGCCG 3 cut(s) 57, 125, 413
BseXI GCAGC 2 cut(s) 12, 366
BseYI CCCAGC 1 cut(s) 327
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 4 cut(s) 16, 148, 388, 407
Bsh1285I CGRYCG 6 cut(s) 23, 60, 128, 213, 416, 503
BshFI GGCC 3 cut(s) 59, 127, 415
BshNI GGYRCC 2 cut(s) 79, 169
BsiEI CGRYCG 6 cut(s) 23, 60, 128, 213, 416, 503
BsiHKAI GWGCWC 1 cut(s) 138
BsiHKCI CYCGRG 3 cut(s) 34, 320, 374
BslFI GGGAC 3 cut(s) 324, 329, 434
BslI CCNNNNNNNGG 6 cut(s) 98, 114, 127, 411, 418, 422
BsmAI GTCTC 1 cut(s) 238
BsmFI GGGAC 3 cut(s) 324, 329, 434
BsnI GGCC 3 cut(s) 59, 127, 415
BsoBI CYCGRG 3 cut(s) 34, 320, 374
Bsp1286I GDGCHC 3 cut(s) 48, 138, 334
Bsp13I TCCGGA 1 cut(s) 183
Bsp143I GATC 2 cut(s) 72, 293
Bsp1720I GCTNAGC 1 cut(s) 103
BspANI GGCC 3 cut(s) 59, 127, 415
BspCNI CTCAG 2 cut(s) 116, 485
BspEI TCCGGA 1 cut(s) 183
BspFNI CGCG 4 cut(s) 16, 148, 388, 407
BspLI GGNNCC 6 cut(s) 81, 119, 171, 295, 339, 340
BspPI GGATC 2 cut(s) 288, 301
BspQI GCTCTTC 1 cut(s) 126
BspT107I GGYRCC 2 cut(s) 79, 169
BsrBI CCGCTC 2 cut(s) 56, 397
BsrFI RCCGGY 1 cut(s) 411
BsrI ACTGG 1 cut(s) 483
BssAI RCCGGY 1 cut(s) 411
BssECI CCNNGG 9 cut(s) 34, 35, 91, 165, 237, 303, 386, 416, 452
BssMI GATC 2 cut(s) 72, 293
BssNI GRCGYC 1 cut(s) 170
BssT1I CCWWGG 1 cut(s) 237
Bst4CI ACNGT 2 cut(s) 466, 504
Bst6I CTCTTC 1 cut(s) 126
BstACI GRCGYC 1 cut(s) 170
BstC8I GCNNGC 3 cut(s) 84, 409, 413
BstDEI CTNAG 2 cut(s) 103, 472
BstDSI CCRYGG 1 cut(s) 386
BstFNI CGCG 4 cut(s) 16, 148, 388, 407
BstH2I RGCGCY 1 cut(s) 173
BstHHI GCGC 3 cut(s) 16, 164, 172
BstKTI GATC 2 cut(s) 75, 296
BstMAI GTCTC 1 cut(s) 238
BstMBI GATC 2 cut(s) 72, 293
BstMCI CGRYCG 6 cut(s) 23, 60, 128, 213, 416, 503
BstMWI GCNNNNNNNGC 9 cut(s) 22, 25, 65, 133, 204, 379, 385, 388, 394
BstSCI CCNGG 9 cut(s) 33, 34, 46, 91, 165, 207, 415, 427, 452
BstSLI GKGCMC 1 cut(s) 334
BstUI CGCG 4 cut(s) 16, 148, 388, 407
BstV1I GCAGC 2 cut(s) 12, 366
BstX2I RGATCY 2 cut(s) 72, 293
BstYI RGATCY 2 cut(s) 72, 293
BstZI CGGCCG 3 cut(s) 57, 125, 413
BsuRI GGCC 3 cut(s) 59, 127, 415
BtgI CCRYGG 1 cut(s) 386
BtrI CACGTC 1 cut(s) 144
Cac8I GCNNGC 3 cut(s) 84, 409, 413
CaiI CAGNNNCTG 1 cut(s) 252
CfoI GCGC 3 cut(s) 16, 164, 172
Cfr10I RCCGGY 1 cut(s) 411
Cfr13I GGNCC 4 cut(s) 118, 189, 338, 425
Cfr42I CCGCGG 1 cut(s) 389
Cfr9I CCCGGG 1 cut(s) 34
CpoI CGGWCCG 1 cut(s) 425
Csp6I GTAC 2 cut(s) 215, 482
CspI CGGWCCG 1 cut(s) 425
CviQI GTAC 2 cut(s) 215, 482
DdeI CTNAG 2 cut(s) 103, 472
DinI GGCGCC 1 cut(s) 171
DpnI GATC 2 cut(s) 74, 295
DpnII GATC 2 cut(s) 72, 293
EaeI YGGCCR 3 cut(s) 57, 125, 413
EagI CGGCCG 3 cut(s) 57, 125, 413
Eam1104I CTCTTC 1 cut(s) 126
EarI CTCTTC 1 cut(s) 126
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 3 cut(s) 57, 125, 413
Eco130I CCWWGG 1 cut(s) 237
Eco24I GRGCYC 1 cut(s) 48
Eco47I GGWCC 4 cut(s) 118, 189, 338, 425
Eco52I CGGCCG 3 cut(s) 57, 125, 413
Eco88I CYCGRG 3 cut(s) 34, 320, 374
EcoO109I RGGNCCY 1 cut(s) 338
EcoT14I CCWWGG 1 cut(s) 237
EcoT38I GRGCYC 1 cut(s) 48
EgeI GGCGCC 1 cut(s) 171
EheI GGCGCC 1 cut(s) 171
ErhI CCWWGG 1 cut(s) 237
FaiI YATR 1 cut(s) 221
FaqI GGGAC 3 cut(s) 324, 329, 434
FauI CCCGC 1 cut(s) 390
FblI GTMKAC 1 cut(s) 468
Fnu4HI GCNGC 7 cut(s) 17, 26, 57, 125, 380, 389, 405
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 7 cut(s) 17, 26, 57, 125, 380, 389, 405
GlaI GCGC 3 cut(s) 15, 163, 171
GluI GCNGC 7 cut(s) 17, 26, 57, 125, 380, 389, 405
GsaI CCCAGC 1 cut(s) 331
HaeII RGCGCY 1 cut(s) 173
HaeIII GGCC 3 cut(s) 59, 127, 415
HhaI GCGC 3 cut(s) 16, 164, 172
Hin1I GRCGYC 1 cut(s) 170
Hin6I GCGC 3 cut(s) 14, 162, 170
HinP1I GCGC 3 cut(s) 14, 162, 170
HincII GTYRAC 1 cut(s) 469
HindII GTYRAC 1 cut(s) 469
HinfI GANTC 2 cut(s) 470, 495
HphI GGTGA 2 cut(s) 253, 377
Hpy166II GTNNAC 3 cut(s) 244, 368, 469
Hpy188I TCNGA 3 cut(s) 307, 475, 500
Hpy188III TCNNGA 2 cut(s) 184, 346
Hpy8I GTNNAC 3 cut(s) 244, 368, 469
Hpy99I CGWCG 3 cut(s) 65, 148, 358
HpyAV CCTTC 1 cut(s) 449
HpyCH4III ACNGT 2 cut(s) 466, 504
HpyCH4IV ACGT 1 cut(s) 143
HpyCH4V TGCA 2 cut(s) 28, 68
HpyF10VI GCNNNNNNNGC 9 cut(s) 22, 25, 65, 133, 204, 379, 385, 388, 394
HpyF3I CTNAG 2 cut(s) 103, 472
HpySE526I ACGT 1 cut(s) 143
Hsp92I GRCGYC 1 cut(s) 170
HspAI GCGC 3 cut(s) 14, 162, 170
KasI GGCGCC 1 cut(s) 169
KflI GGGWCCC 1 cut(s) 338
Kpn2I TCCGGA 1 cut(s) 183
KroI GCCGGC 1 cut(s) 411
KroNI GCCGGC 1 cut(s) 413
KspI CCGCGG 1 cut(s) 389
Kzo9I GATC 2 cut(s) 72, 293
LguI GCTCTTC 1 cut(s) 126
LmnI GCTCC 2 cut(s) 53, 441
Lsp1109I GCAGC 2 cut(s) 12, 366
LweI GCATC 1 cut(s) 236
MaeII ACGT 1 cut(s) 143
MaeIII GTNAC 1 cut(s) 298
MalI GATC 2 cut(s) 74, 295
MbiI CCGCTC 2 cut(s) 56, 397
MboI GATC 2 cut(s) 72, 293
MboII GAAGA 1 cut(s) 143
MflI RGATCY 2 cut(s) 72, 293
MhlI GDGCHC 3 cut(s) 48, 138, 334
MluCI AATT 1 cut(s) 508
Mly113I GGCGCC 1 cut(s) 170
MlyI GAGTC 1 cut(s) 464
MnlI CCTC 6 cut(s) 3, 104, 180, 260, 313, 316
MroI TCCGGA 1 cut(s) 183
MroNI GCCGGC 1 cut(s) 411
MseI TTAA 2 cut(s) 507, 511
MspA1I CMGCKG 2 cut(s) 124, 388
MspR9I CCNGG 9 cut(s) 35, 36, 48, 93, 167, 209, 417, 429, 454
MvnI CGCG 4 cut(s) 16, 148, 388, 407
MwoI GCNNNNNNNGC 9 cut(s) 22, 25, 65, 133, 204, 379, 385, 388, 394
NaeI GCCGGC 1 cut(s) 413
NarI GGCGCC 1 cut(s) 170
NciI CCSGG 9 cut(s) 35, 36, 48, 93, 167, 209, 417, 429, 454
NdeII GATC 2 cut(s) 72, 293
NgoMIV GCCGGC 1 cut(s) 411
NlaIV GGNNCC 6 cut(s) 81, 119, 171, 295, 339, 340
PacI TTAATTAA 1 cut(s) 511
PaeR7I CTCGAG 2 cut(s) 320, 374
PciSI GCTCTTC 1 cut(s) 126
PdiI GCCGGC 1 cut(s) 413
PfeI GAWTC 1 cut(s) 495
PkrI GCNGC 7 cut(s) 18, 27, 58, 126, 381, 390, 406
PleI GAGTC 1 cut(s) 464
PluTI GGCGCC 1 cut(s) 173
PpsI GAGTC 1 cut(s) 464
PpuMI RGGWCCY 1 cut(s) 338
Psp5II RGGWCCY 1 cut(s) 338
PspFI CCCAGC 1 cut(s) 327
PspN4I GGNNCC 6 cut(s) 81, 119, 171, 295, 339, 340
PspPI GGNCC 4 cut(s) 118, 189, 338, 425
PspPPI RGGWCCY 1 cut(s) 338
PspXI VCTCGAGB 2 cut(s) 320, 374
PstNI CAGNNNCTG 1 cut(s) 252
PsuI RGATCY 2 cut(s) 72, 293
RsaI GTAC 2 cut(s) 216, 483
RsaNI GTAC 2 cut(s) 215, 482
Rsr2I CGGWCCG 1 cut(s) 425
RsrII CGGWCCG 1 cut(s) 425
SacII CCGCGG 1 cut(s) 389
SalI GTCGAC 1 cut(s) 467
SapI GCTCTTC 1 cut(s) 126
SaqAI TTAA 2 cut(s) 507, 511
SatI GCNGC 7 cut(s) 17, 26, 57, 125, 380, 389, 405
Sau3AI GATC 2 cut(s) 72, 293
Sau96I GGNCC 4 cut(s) 118, 189, 338, 425
SchI GAGTC 1 cut(s) 464
ScrFI CCNGG 9 cut(s) 35, 36, 48, 93, 167, 209, 417, 429, 454
SduI GDGCHC 3 cut(s) 48, 138, 334
SetI ASST 5 cut(s) 115, 146, 243, 305, 381
SfaNI GCATC 1 cut(s) 236
SfoI GGCGCC 1 cut(s) 171
Sfr274I CTCGAG 2 cut(s) 320, 374
Sfr303I CCGCGG 1 cut(s) 389
SgrBI CCGCGG 1 cut(s) 389
SinI GGWCC 4 cut(s) 118, 189, 338, 425
SlaI CTCGAG 2 cut(s) 320, 374
SmaI CCCGGG 1 cut(s) 36
SmlI CTYRAG 2 cut(s) 320, 374
SmoI CTYRAG 2 cut(s) 320, 374
Sse9I AATT 1 cut(s) 508
SspDI GGCGCC 1 cut(s) 169
StyD4I CCNGG 9 cut(s) 33, 34, 46, 91, 165, 207, 415, 427, 452
StyI CCWWGG 1 cut(s) 237
TaaI ACNGT 2 cut(s) 466, 504
TaiI ACGT 1 cut(s) 146
TaqI TCGA 3 cut(s) 321, 375, 468
TaqII GACCGA 1 cut(s) 206
TasI AATT 1 cut(s) 508
TauI GCSGC 5 cut(s) 19, 59, 127, 391, 407
TfiI GAWTC 1 cut(s) 495
Tru1I TTAA 2 cut(s) 507, 511
Tru9I TTAA 2 cut(s) 507, 511
TseI GCWGC 2 cut(s) 25, 379
TspGWI ACGGA 3 cut(s) 286, 438, 499
TspMI CCCGGG 1 cut(s) 34
VpaK11BI GGWCC 4 cut(s) 118, 189, 338, 425
XhoI CTCGAG 2 cut(s) 320, 374
XmaI CCCGGG 1 cut(s) 34
XmiI GTMKAC 1 cut(s) 468
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.