Rroxscaffold_48G00448430

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000048
OG0000104
Physical Location & Seq
Reverse (-)
1432 .. 2880
1449 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_48G00448430.1

Sequence Viewer

Length: 723 bp
ATGTGTGCGAGTCAACGGGTGATTAAACCCGTAAGGCGCAAGGAAGCTAATGTGCGGGATCCCTTTGCGGGTGCACCGCCGACCGACCTTGATCTTCGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCGGTGGAGGCCCGCAGCGATGCGACGTGCAAATCGTTCGTCGACTTGGGACGGCGTGGCTGCTTTGTTGAGCCACGCCAAGGAATCGAGAGCTCCAAGTGGGCCATTTTTGCCTGCCCACCCTGGAAACGGCTCGGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACGCCTGCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCTGGGCACGGGGGTCCCGGTCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACGGTCGACTCGGAACTGGTACGGACAAGGGGAATCCGACTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

240

Amino Acids

25.81

Weight (kDa)

10.26

Isoelectric Point (pI)

51.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 337
AccBSI CCGCTC 2 cut(s) 159, 610
AccI GTMKAC 2 cut(s) 221, 682
AccII CGCG 3 cut(s) 358, 601, 620
AccIII TCCGGA 1 cut(s) 394
AclWI GGATC 4 cut(s) 53, 66, 499, 512
AcoI YGGCCR 2 cut(s) 315, 626
AfaI GTAC 2 cut(s) 426, 697
AgsI TTSAA 2 cut(s) 389, 676
AjiI CACGTC 2 cut(s) 206, 354
AjnI CCWGG 1 cut(s) 301
AluBI AGCT 3 cut(s) 47, 272, 592
AluI AGCT 3 cut(s) 47, 272, 592
Alw21I GWGCWC 3 cut(s) 76, 274, 348
Alw26I GTCTC 1 cut(s) 449
Alw44I GTGCAC 1 cut(s) 72
AlwI GGATC 4 cut(s) 53, 66, 499, 512
AlwNI CAGNNNCTG 1 cut(s) 337
Ama87I CYCGRG 4 cut(s) 515, 532, 587, 666
Aor13HI TCCGGA 1 cut(s) 394
AoxI GGCC 5 cut(s) 188, 281, 315, 381, 626
ApaLI GTGCAC 1 cut(s) 72
ApeKI GCWGC 3 cut(s) 194, 239, 592
ArsI GACNNNNNNTTYG 2 cut(s) 203, 235
AspLEI GCGC 2 cut(s) 39, 374
AspS9I GGNCC 8 cut(s) 130, 189, 281, 328, 382, 400, 551, 557
AsuC2I CCSGG 5 cut(s) 377, 555, 630, 667, 668
AsuHPI GGTGA 4 cut(s) 31, 155, 464, 590
AvaI CYCGRG 4 cut(s) 515, 532, 587, 666
AvaII GGWCC 5 cut(s) 130, 328, 400, 551, 557
BaeGI GKGCMC 2 cut(s) 76, 546
BamHI GGATCC 2 cut(s) 58, 504
BanII GRGCYC 1 cut(s) 274
Bbv12I GWGCWC 3 cut(s) 76, 274, 348
BbvI GCAGC 3 cut(s) 206, 226, 579
BccI CCATC 1 cut(s) 134
BceAI ACGGC 2 cut(s) 247, 325
BcgI CGANNNNNNTGC 4 cut(s) 107, 141, 198, 232
BciT130I CCWGG 1 cut(s) 303
BcnI CCSGG 5 cut(s) 377, 555, 630, 667, 668
BcoDI GTCTC 1 cut(s) 449
BglI GCCNNNNNGGC 1 cut(s) 380
BisI GCNGC 7 cut(s) 195, 240, 335, 381, 593, 602, 618
BlsI GCNGC 7 cut(s) 196, 241, 336, 382, 594, 603, 619
Bme1390I CCNGG 6 cut(s) 303, 377, 555, 630, 667, 668
Bme18I GGWCC 5 cut(s) 130, 328, 400, 551, 557
BmeT110I CYCGRG 4 cut(s) 515, 532, 587, 666
BmgBI CACGTC 2 cut(s) 206, 354
BmgT120I GGNCC 8 cut(s) 130, 189, 281, 328, 382, 400, 551, 557
BmiI GGNNCC 7 cut(s) 60, 131, 132, 329, 506, 552, 553
BmrFI CCNGG 6 cut(s) 303, 377, 555, 630, 667, 668
BmrI ACTGGG 1 cut(s) 650
BmsI GCATC 2 cut(s) 189, 446
BmuI ACTGGG 1 cut(s) 650
Bpu10I CCTNAGC 1 cut(s) 155
BpuMI CCSGG 5 cut(s) 377, 555, 630, 667, 668
BsaI GGTCTC 1 cut(s) 449
BsaJI CCNNGG 8 cut(s) 258, 301, 375, 448, 514, 599, 629, 666
BsaWI WCCGGW 2 cut(s) 366, 394
BsaXI ACNNNNNCTCC 2 cut(s) 312, 342
Bse118I RCCGGY 2 cut(s) 418, 624
Bse1I ACTGG 2 cut(s) 645, 697
BseAI TCCGGA 1 cut(s) 394
BseBI CCWGG 1 cut(s) 303
BseDI CCNNGG 8 cut(s) 258, 301, 375, 448, 514, 599, 629, 666
BseMII CTCAG 1 cut(s) 146
BseNI ACTGG 2 cut(s) 645, 697
BseSI GKGCMC 2 cut(s) 76, 546
BseX3I CGGCCG 2 cut(s) 315, 626
BseXI GCAGC 3 cut(s) 206, 226, 579
BseYI CCCAGC 1 cut(s) 539
Bsh1236I CGCG 3 cut(s) 358, 601, 620
Bsh1285I CGRYCG 5 cut(s) 84, 318, 423, 629, 682
BshFI GGCC 5 cut(s) 190, 283, 317, 383, 628
BsiEI CGRYCG 5 cut(s) 84, 318, 423, 629, 682
BsiHKAI GWGCWC 3 cut(s) 76, 274, 348
BsiHKCI CYCGRG 4 cut(s) 515, 532, 587, 666
BsiSI CCGG 9 cut(s) 318, 367, 377, 395, 419, 555, 625, 629, 667
BslFI GGGAC 4 cut(s) 143, 242, 537, 647
BsmAI GTCTC 1 cut(s) 449
BsmFI GGGAC 4 cut(s) 143, 242, 537, 647
BsnI GGCC 5 cut(s) 190, 283, 317, 383, 628
Bso31I GGTCTC 1 cut(s) 449
BsoBI CYCGRG 4 cut(s) 515, 532, 587, 666
Bsp1286I GDGCHC 4 cut(s) 76, 274, 348, 546
Bsp13I TCCGGA 1 cut(s) 394
Bsp143I GATC 3 cut(s) 58, 91, 504
BspANI GGCC 5 cut(s) 190, 283, 317, 383, 628
BspCNI CTCAG 1 cut(s) 147
BspEI TCCGGA 1 cut(s) 394
BspFNI CGCG 3 cut(s) 358, 601, 620
BspLI GGNNCC 7 cut(s) 60, 131, 132, 329, 506, 552, 553
BspPI GGATC 4 cut(s) 53, 66, 499, 512
BspQI GCTCTTC 1 cut(s) 336
BspTNI GGTCTC 1 cut(s) 449
BsrBI CCGCTC 2 cut(s) 159, 610
BsrFI RCCGGY 2 cut(s) 418, 624
BsrI ACTGG 2 cut(s) 645, 697
BssAI RCCGGY 2 cut(s) 418, 624
BssECI CCNNGG 8 cut(s) 258, 301, 375, 448, 514, 599, 629, 666
BssMI GATC 3 cut(s) 58, 91, 504
BssT1I CCWWGG 2 cut(s) 258, 448
Bst2UI CCWGG 1 cut(s) 303
Bst4CI ACNGT 2 cut(s) 680, 718
Bst6I CTCTTC 1 cut(s) 336
BstC8I GCNNGC 6 cut(s) 120, 192, 294, 461, 622, 626
BstDEI CTNAG 1 cut(s) 155
BstDSI CCRYGG 1 cut(s) 599
BstFNI CGCG 3 cut(s) 358, 601, 620
BstHHI GCGC 2 cut(s) 39, 374
BstKTI GATC 3 cut(s) 61, 94, 507
BstMAI GTCTC 1 cut(s) 449
BstMBI GATC 3 cut(s) 58, 91, 504
BstMCI CGRYCG 5 cut(s) 84, 318, 423, 629, 682
BstMWI GCNNNNNNNGC 8 cut(s) 289, 343, 380, 415, 592, 598, 601, 607
BstNI CCWGG 1 cut(s) 303
BstNSI RCATGY 1 cut(s) 122
BstSCI CCNGG 6 cut(s) 301, 375, 553, 628, 665, 666
BstSLI GKGCMC 2 cut(s) 76, 546
BstUI CGCG 3 cut(s) 358, 601, 620
BstV1I GCAGC 3 cut(s) 206, 226, 579
BstX2I RGATCY 2 cut(s) 58, 504
BstYI RGATCY 2 cut(s) 58, 504
BstZI CGGCCG 2 cut(s) 315, 626
BsuRI GGCC 5 cut(s) 190, 283, 317, 383, 628
BtgI CCRYGG 1 cut(s) 599
BtgZI GCGATG 1 cut(s) 212
BtrI CACGTC 2 cut(s) 206, 354
Cac8I GCNNGC 6 cut(s) 120, 192, 294, 461, 622, 626
CaiI CAGNNNCTG 1 cut(s) 337
CfoI GCGC 2 cut(s) 39, 374
Cfr10I RCCGGY 2 cut(s) 418, 624
Cfr13I GGNCC 8 cut(s) 130, 189, 281, 328, 382, 400, 551, 557
Cfr42I CCGCGG 1 cut(s) 602
Cfr9I CCCGGG 1 cut(s) 666
CpoI CGGWCCG 1 cut(s) 557
Csp6I GTAC 2 cut(s) 425, 696
CspI CGGWCCG 1 cut(s) 557
CviAII CATG 1 cut(s) 119
CviQI GTAC 2 cut(s) 425, 696
DdeI CTNAG 1 cut(s) 155
DpnI GATC 3 cut(s) 60, 93, 506
DpnII GATC 3 cut(s) 58, 91, 504
EaeI YGGCCR 2 cut(s) 315, 626
EagI CGGCCG 2 cut(s) 315, 626
Eam1104I CTCTTC 1 cut(s) 336
EarI CTCTTC 1 cut(s) 336
Ecl136II GAGCTC 1 cut(s) 272
EclXI CGGCCG 2 cut(s) 315, 626
Eco130I CCWWGG 2 cut(s) 258, 448
Eco24I GRGCYC 1 cut(s) 274
Eco31I GGTCTC 1 cut(s) 449
Eco47I GGWCC 5 cut(s) 130, 328, 400, 551, 557
Eco52I CGGCCG 2 cut(s) 315, 626
Eco53kI GAGCTC 1 cut(s) 272
Eco88I CYCGRG 4 cut(s) 515, 532, 587, 666
EcoICRI GAGCTC 1 cut(s) 272
EcoO109I RGGNCCY 2 cut(s) 130, 551
EcoRII CCWGG 1 cut(s) 301
EcoT14I CCWWGG 2 cut(s) 258, 448
EcoT38I GRGCYC 1 cut(s) 274
ErhI CCWWGG 2 cut(s) 258, 448
FaeI CATG 1 cut(s) 122
FaiI YATR 3 cut(s) 120, 151, 431
FaqI GGGAC 4 cut(s) 143, 242, 537, 647
FatI CATG 1 cut(s) 118
FauI CCCGC 5 cut(s) 48, 61, 152, 199, 603
FblI GTMKAC 2 cut(s) 221, 682
Fnu4HI GCNGC 7 cut(s) 195, 240, 335, 381, 593, 602, 618
FriOI GRGCYC 1 cut(s) 274
Fsp4HI GCNGC 7 cut(s) 195, 240, 335, 381, 593, 602, 618
GlaI GCGC 2 cut(s) 38, 373
GluI GCNGC 7 cut(s) 195, 240, 335, 381, 593, 602, 618
GsaI CCCAGC 1 cut(s) 543
HaeIII GGCC 5 cut(s) 190, 283, 317, 383, 628
HapII CCGG 9 cut(s) 318, 367, 377, 395, 419, 555, 625, 629, 667
HhaI GCGC 2 cut(s) 39, 374
Hin1II CATG 1 cut(s) 122
Hin6I GCGC 2 cut(s) 37, 372
HinP1I GCGC 2 cut(s) 37, 372
HincII GTYRAC 3 cut(s) 14, 222, 683
HindII GTYRAC 3 cut(s) 14, 222, 683
HinfI GANTC 4 cut(s) 10, 263, 684, 709
HpaII CCGG 9 cut(s) 318, 367, 377, 395, 419, 555, 625, 629, 667
HphI GGTGA 4 cut(s) 31, 155, 464, 590
Hpy166II GTNNAC 7 cut(s) 14, 74, 146, 222, 455, 581, 683
Hpy188I TCNGA 3 cut(s) 561, 689, 714
Hpy188III TCNNGA 5 cut(s) 98, 128, 267, 395, 517
Hpy8I GTNNAC 7 cut(s) 14, 74, 146, 222, 455, 581, 683
Hpy99I CGWCG 4 cut(s) 207, 223, 358, 571
HpyAV CCTTC 2 cut(s) 95, 662
HpyCH4III ACNGT 2 cut(s) 680, 718
HpyCH4IV ACGT 2 cut(s) 205, 353
HpyCH4V TGCA 2 cut(s) 74, 209
HpyF10VI GCNNNNNNNGC 8 cut(s) 289, 343, 380, 415, 592, 598, 601, 607
HpyF3I CTNAG 1 cut(s) 155
HpySE526I ACGT 2 cut(s) 205, 353
Hsp92II CATG 1 cut(s) 122
HspAI GCGC 2 cut(s) 37, 372
KflI GGGWCCC 2 cut(s) 130, 551
Kpn2I TCCGGA 1 cut(s) 394
KroI GCCGGC 1 cut(s) 624
KroNI GCCGGC 1 cut(s) 626
KspI CCGCGG 1 cut(s) 602
Kzo9I GATC 3 cut(s) 58, 91, 504
LguI GCTCTTC 1 cut(s) 336
LmnI GCTCC 2 cut(s) 277, 654
Lsp1109I GCAGC 3 cut(s) 206, 226, 579
LweI GCATC 2 cut(s) 189, 446
MaeII ACGT 2 cut(s) 205, 353
MaeIII GTNAC 1 cut(s) 509
MalI GATC 3 cut(s) 60, 93, 506
MbiI CCGCTC 2 cut(s) 159, 610
MboI GATC 3 cut(s) 58, 91, 504
MboII GAAGA 2 cut(s) 86, 353
MflI RGATCY 2 cut(s) 58, 504
MhlI GDGCHC 4 cut(s) 76, 274, 348, 546
MlyI GAGTC 2 cut(s) 19, 678
MnlI CCTC 6 cut(s) 166, 180, 314, 391, 524, 528
MroI TCCGGA 1 cut(s) 394
MroNI GCCGGC 1 cut(s) 624
MseI TTAA 2 cut(s) 24, 721
MspA1I CMGCKG 2 cut(s) 334, 601
MspI CCGG 9 cut(s) 318, 367, 377, 395, 419, 555, 625, 629, 667
MspR9I CCNGG 6 cut(s) 303, 377, 555, 630, 667, 668
MvaI CCWGG 1 cut(s) 303
MvnI CGCG 3 cut(s) 358, 601, 620
MwoI GCNNNNNNNGC 8 cut(s) 289, 343, 380, 415, 592, 598, 601, 607
NaeI GCCGGC 1 cut(s) 626
NciI CCSGG 5 cut(s) 377, 555, 630, 667, 668
NdeII GATC 3 cut(s) 58, 91, 504
NgoMIV GCCGGC 1 cut(s) 624
NlaIII CATG 1 cut(s) 122
NlaIV GGNNCC 7 cut(s) 60, 131, 132, 329, 506, 552, 553
NmeAIII GCCGAG 1 cut(s) 293
NspI RCATGY 1 cut(s) 122
PaeI GCATGC 1 cut(s) 122
PaeR7I CTCGAG 2 cut(s) 532, 587
PciSI GCTCTTC 1 cut(s) 336
PcsI WCGNNNNNNNCGW 1 cut(s) 211
PdiI GCCGGC 1 cut(s) 626
PfeI GAWTC 2 cut(s) 263, 709
PflMI CCANNNNNTGG 1 cut(s) 337
PkrI GCNGC 7 cut(s) 196, 241, 336, 382, 594, 603, 619
PleI GAGTC 2 cut(s) 18, 678
PpsI GAGTC 2 cut(s) 18, 678
PpuMI RGGWCCY 2 cut(s) 130, 551
Psp124BI GAGCTC 1 cut(s) 274
Psp5II RGGWCCY 2 cut(s) 130, 551
Psp6I CCWGG 1 cut(s) 301
PspFI CCCAGC 1 cut(s) 539
PspGI CCWGG 1 cut(s) 301
PspN4I GGNNCC 7 cut(s) 60, 131, 132, 329, 506, 552, 553
PspPI GGNCC 8 cut(s) 130, 189, 281, 328, 382, 400, 551, 557
PspPPI RGGWCCY 2 cut(s) 130, 551
PspXI VCTCGAGB 2 cut(s) 532, 587
PstNI CAGNNNCTG 1 cut(s) 337
PsuI RGATCY 2 cut(s) 58, 504
RsaI GTAC 2 cut(s) 426, 697
RsaNI GTAC 2 cut(s) 425, 696
Rsr2I CGGWCCG 1 cut(s) 557
RsrII CGGWCCG 1 cut(s) 557
SacI GAGCTC 1 cut(s) 274
SacII CCGCGG 1 cut(s) 602
SalI GTCGAC 2 cut(s) 220, 681
SapI GCTCTTC 1 cut(s) 336
SaqAI TTAA 2 cut(s) 24, 721
SatI GCNGC 7 cut(s) 195, 240, 335, 381, 593, 602, 618
Sau3AI GATC 3 cut(s) 58, 91, 504
Sau96I GGNCC 8 cut(s) 130, 189, 281, 328, 382, 400, 551, 557
SchI GAGTC 2 cut(s) 19, 678
ScrFI CCNGG 6 cut(s) 303, 377, 555, 630, 667, 668
SduI GDGCHC 4 cut(s) 76, 274, 348, 546
SfaNI GCATC 2 cut(s) 189, 446
Sfr274I CTCGAG 2 cut(s) 532, 587
Sfr303I CCGCGG 1 cut(s) 602
SgrBI CCGCGG 1 cut(s) 602
SinI GGWCC 5 cut(s) 130, 328, 400, 551, 557
SlaI CTCGAG 2 cut(s) 532, 587
SmaI CCCGGG 1 cut(s) 668
SmlI CTYRAG 2 cut(s) 532, 587
SmoI CTYRAG 2 cut(s) 532, 587
SphI GCATGC 1 cut(s) 122
SstI GAGCTC 1 cut(s) 274
StyD4I CCNGG 6 cut(s) 301, 375, 553, 628, 665, 666
StyI CCWWGG 2 cut(s) 258, 448
TaaI ACNGT 2 cut(s) 680, 718
TaiI ACGT 2 cut(s) 208, 356
TaqI TCGA 7 cut(s) 97, 108, 221, 266, 533, 588, 682
TaqII GACCGA 2 cut(s) 98, 417
TauI GCSGC 4 cut(s) 337, 383, 604, 620
TfiI GAWTC 2 cut(s) 263, 709
Tru1I TTAA 2 cut(s) 24, 721
Tru9I TTAA 2 cut(s) 24, 721
TseI GCWGC 3 cut(s) 194, 239, 592
TspGWI ACGGA 3 cut(s) 497, 651, 713
TspMI CCCGGG 1 cut(s) 666
Van91I CCANNNNNTGG 1 cut(s) 337
VneI GTGCAC 1 cut(s) 72
VpaK11BI GGWCC 5 cut(s) 130, 328, 400, 551, 557
XceI RCATGY 1 cut(s) 122
XhoI CTCGAG 2 cut(s) 532, 587
XmaI CCCGGG 1 cut(s) 666
XmiI GTMKAC 2 cut(s) 221, 682
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.