Rroxscaffold_97G00442360

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000097
OG0000104
Physical Location & Seq
Reverse (-)
89023 .. 91901
2879 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_97G00442360.1

Sequence Viewer

Length: 711 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACACAGGGCGTGAGCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGCCTGCCCACCACTGGAAACGGCTCGGCCGGAGGTAGGGTCCGGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACGAGCCTGCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGGCTGGGCACGGGGGTCCCGGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACGGTCGACTCGGAACTGGCTTGCCAAGACAATGCCGAGGCTAGGCAATGCCATGGCGACGAGAGGCTTGCTAGCGAAGGCTAATGCAATGTCAAGCCAAGGCTTGCCAAGACAATGCCAAGAGGAGGGCTTGCTAGCGAGGCTAATGCAATGCCAAGCCAAGGCTTGCCAAGACAATGCCGAGGCTTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

236

Amino Acids

24.83

Weight (kDa)

11.32

Isoelectric Point (pI)

58.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 56, 453
AccI GTMKAC 1 cut(s) 524
AccII CGCG 4 cut(s) 16, 196, 444, 463
AccIII TCCGGA 1 cut(s) 232
AclWI GGATC 2 cut(s) 339, 352
AcoI YGGCCR 3 cut(s) 57, 153, 468
AfaI GTAC 1 cut(s) 264
AfiI CCNNNNNNNGG 8 cut(s) 121, 140, 162, 175, 477, 560, 643, 679
AgsI TTSAA 4 cut(s) 96, 110, 227, 518
AjiI CACGTC 1 cut(s) 192
AluBI AGCT 1 cut(s) 435
AluI AGCT 1 cut(s) 435
Alw21I GWGCWC 1 cut(s) 186
Alw26I GTCTC 1 cut(s) 287
AlwI GGATC 2 cut(s) 339, 352
Ama87I CYCGRG 3 cut(s) 355, 430, 508
Aor13HI TCCGGA 1 cut(s) 232
AoxI GGCC 5 cut(s) 57, 112, 153, 219, 468
ApeKI GCWGC 3 cut(s) 25, 371, 435
AspLEI GCGC 2 cut(s) 16, 212
AspS9I GGNCC 5 cut(s) 166, 220, 238, 393, 399
AsuC2I CCSGG 6 cut(s) 48, 215, 397, 472, 509, 510
AsuHPI GGTGA 2 cut(s) 302, 433
AsuNHI GCTAGC 2 cut(s) 589, 652
AvaI CYCGRG 3 cut(s) 355, 430, 508
AvaII GGWCC 4 cut(s) 166, 238, 393, 399
BaeGI GKGCMC 1 cut(s) 388
BamHI GGATCC 1 cut(s) 344
Bbv12I GWGCWC 1 cut(s) 186
BbvI GCAGC 3 cut(s) 12, 358, 422
BceAI ACGGC 2 cut(s) 44, 163
BcgI CGANNNNNNTGC 4 cut(s) 568, 602, 646, 680
BcnI CCSGG 6 cut(s) 48, 215, 397, 472, 509, 510
BcoDI GTCTC 1 cut(s) 287
BfaI CTAG 4 cut(s) 560, 590, 653, 709
BglI GCCNNNNNGGC 1 cut(s) 218
BglII AGATCT 1 cut(s) 70
Bme1390I CCNGG 6 cut(s) 48, 215, 397, 472, 509, 510
Bme18I GGWCC 4 cut(s) 166, 238, 393, 399
BmeT110I CYCGRG 3 cut(s) 355, 430, 508
BmgBI CACGTC 1 cut(s) 192
BmgT120I GGNCC 5 cut(s) 166, 220, 238, 393, 399
BmiI GGNNCC 5 cut(s) 167, 346, 394, 395, 401
BmrFI CCNGG 6 cut(s) 48, 215, 397, 472, 509, 510
BmrI ACTGGG 1 cut(s) 492
BmsI GCATC 1 cut(s) 284
BmtI GCTAGC 2 cut(s) 593, 656
BmuI ACTGGG 1 cut(s) 492
BpuMI CCSGG 6 cut(s) 48, 215, 397, 472, 509, 510
BsaI GGTCTC 1 cut(s) 287
BsaWI WCCGGW 2 cut(s) 204, 232
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 150, 180
Bsc4I CCNNNNNNNGG 8 cut(s) 121, 140, 162, 175, 477, 560, 643, 679
Bse118I RCCGGY 1 cut(s) 256
Bse1I ACTGG 3 cut(s) 145, 487, 539
Bse3DI GCAATG 3 cut(s) 571, 612, 674
BseAI TCCGGA 1 cut(s) 232
BseLI CCNNNNNNNGG 8 cut(s) 121, 140, 162, 175, 477, 560, 643, 679
BseMI GCAATG 3 cut(s) 571, 612, 674
BseNI ACTGG 3 cut(s) 145, 487, 539
BseRI GAGGAG 1 cut(s) 656
BseSI GKGCMC 1 cut(s) 388
BseX3I CGGCCG 3 cut(s) 57, 153, 468
BseXI GCAGC 3 cut(s) 12, 358, 422
BseYI CCCAGC 1 cut(s) 381
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 4 cut(s) 16, 196, 444, 463
Bsh1285I CGRYCG 6 cut(s) 23, 60, 156, 261, 471, 524
BshFI GGCC 5 cut(s) 59, 114, 155, 221, 470
BsiEI CGRYCG 6 cut(s) 23, 60, 156, 261, 471, 524
BsiHKAI GWGCWC 1 cut(s) 186
BsiHKCI CYCGRG 3 cut(s) 355, 430, 508
BslFI GGGAC 3 cut(s) 379, 385, 489
BslI CCNNNNNNNGG 8 cut(s) 121, 140, 162, 175, 477, 560, 643, 679
BsmAI GTCTC 1 cut(s) 287
BsmFI GGGAC 3 cut(s) 379, 385, 489
BsnI GGCC 5 cut(s) 59, 114, 155, 221, 470
Bso31I GGTCTC 1 cut(s) 287
BsoBI CYCGRG 3 cut(s) 355, 430, 508
Bsp1286I GDGCHC 2 cut(s) 186, 388
Bsp13I TCCGGA 1 cut(s) 232
Bsp143I GATC 2 cut(s) 70, 344
Bsp19I CCATGG 1 cut(s) 570
BspANI GGCC 5 cut(s) 59, 114, 155, 221, 470
BspEI TCCGGA 1 cut(s) 232
BspFNI CGCG 4 cut(s) 16, 196, 444, 463
BspLI GGNNCC 5 cut(s) 167, 346, 394, 395, 401
BspOI GCTAGC 2 cut(s) 593, 656
BspPI GGATC 2 cut(s) 339, 352
BspQI GCTCTTC 1 cut(s) 174
BspTNI GGTCTC 1 cut(s) 287
BsrBI CCGCTC 2 cut(s) 56, 453
BsrDI GCAATG 3 cut(s) 571, 612, 674
BsrFI RCCGGY 1 cut(s) 256
BsrI ACTGG 3 cut(s) 145, 487, 539
BssAI RCCGGY 1 cut(s) 256
BssMI GATC 2 cut(s) 70, 344
BssT1I CCWWGG 4 cut(s) 286, 570, 616, 678
Bst4CI ACNGT 1 cut(s) 522
Bst6I CTCTTC 2 cut(s) 112, 174
BstDSI CCRYGG 2 cut(s) 442, 570
BstFNI CGCG 4 cut(s) 16, 196, 444, 463
BstHHI GCGC 2 cut(s) 16, 212
BstKTI GATC 2 cut(s) 73, 347
BstMAI GTCTC 1 cut(s) 287
BstMBI GATC 2 cut(s) 70, 344
BstMCI CGRYCG 6 cut(s) 23, 60, 156, 261, 471, 524
BstSCI CCNGG 6 cut(s) 46, 213, 395, 470, 507, 508
BstSLI GKGCMC 1 cut(s) 388
BstUI CGCG 4 cut(s) 16, 196, 444, 463
BstV1I GCAGC 3 cut(s) 12, 358, 422
BstX2I RGATCY 2 cut(s) 70, 344
BstYI RGATCY 2 cut(s) 70, 344
BstZI CGGCCG 3 cut(s) 57, 153, 468
BsuRI GGCC 5 cut(s) 59, 114, 155, 221, 470
BtgI CCRYGG 2 cut(s) 442, 570
BtrI CACGTC 1 cut(s) 192
BtsIMutI CAGTG 1 cut(s) 138
CfoI GCGC 2 cut(s) 16, 212
Cfr10I RCCGGY 1 cut(s) 256
Cfr13I GGNCC 5 cut(s) 166, 220, 238, 393, 399
Cfr42I CCGCGG 1 cut(s) 445
Cfr9I CCCGGG 1 cut(s) 508
Csp6I GTAC 1 cut(s) 263
CviAII CATG 1 cut(s) 571
CviQI GTAC 1 cut(s) 263
DpnI GATC 2 cut(s) 72, 346
DpnII GATC 2 cut(s) 70, 344
EaeI YGGCCR 3 cut(s) 57, 153, 468
EagI CGGCCG 3 cut(s) 57, 153, 468
Eam1104I CTCTTC 2 cut(s) 112, 174
EarI CTCTTC 2 cut(s) 112, 174
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 3 cut(s) 57, 153, 468
Eco130I CCWWGG 4 cut(s) 286, 570, 616, 678
Eco31I GGTCTC 1 cut(s) 287
Eco47I GGWCC 4 cut(s) 166, 238, 393, 399
Eco52I CGGCCG 3 cut(s) 57, 153, 468
Eco88I CYCGRG 3 cut(s) 355, 430, 508
EcoO109I RGGNCCY 1 cut(s) 393
EcoT14I CCWWGG 4 cut(s) 286, 570, 616, 678
ErhI CCWWGG 4 cut(s) 286, 570, 616, 678
FaeI CATG 1 cut(s) 574
FaiI YATR 2 cut(s) 269, 572
FaqI GGGAC 3 cut(s) 379, 385, 489
FatI CATG 1 cut(s) 570
FauI CCCGC 1 cut(s) 446
FblI GTMKAC 1 cut(s) 524
FspBI CTAG 4 cut(s) 560, 590, 653, 709
GlaI GCGC 2 cut(s) 15, 211
GsaI CCCAGC 1 cut(s) 385
HaeIII GGCC 5 cut(s) 59, 114, 155, 221, 470
HhaI GCGC 2 cut(s) 16, 212
Hin1II CATG 1 cut(s) 574
Hin6I GCGC 2 cut(s) 14, 210
HinP1I GCGC 2 cut(s) 14, 210
HincII GTYRAC 1 cut(s) 525
HindII GTYRAC 1 cut(s) 525
HinfI GANTC 1 cut(s) 526
HphI GGTGA 2 cut(s) 302, 433
Hpy166II GTNNAC 3 cut(s) 293, 424, 525
Hpy188I TCNGA 1 cut(s) 531
Hpy188III TCNNGA 3 cut(s) 233, 357, 402
Hpy8I GTNNAC 3 cut(s) 293, 424, 525
Hpy99I CGWCG 4 cut(s) 65, 196, 414, 580
HpyAV CCTTC 3 cut(s) 104, 504, 589
HpyCH4III ACNGT 1 cut(s) 522
HpyCH4IV ACGT 1 cut(s) 191
HpyCH4V TGCA 4 cut(s) 28, 68, 605, 667
HpySE526I ACGT 1 cut(s) 191
Hsp92II CATG 1 cut(s) 574
HspAI GCGC 2 cut(s) 14, 210
KflI GGGWCCC 1 cut(s) 393
Kpn2I TCCGGA 1 cut(s) 232
KspI CCGCGG 1 cut(s) 445
Kzo9I GATC 2 cut(s) 70, 344
LguI GCTCTTC 1 cut(s) 174
LmnI GCTCC 2 cut(s) 53, 496
Lsp1109I GCAGC 3 cut(s) 12, 358, 422
LweI GCATC 1 cut(s) 284
MaeI CTAG 4 cut(s) 560, 590, 653, 709
MaeII ACGT 1 cut(s) 191
MaeIII GTNAC 1 cut(s) 349
MalI GATC 2 cut(s) 72, 346
MbiI CCGCTC 2 cut(s) 56, 453
MboI GATC 2 cut(s) 70, 344
MboII GAAGA 2 cut(s) 129, 191
MflI RGATCY 2 cut(s) 70, 344
MhlI GDGCHC 2 cut(s) 186, 388
MlyI GAGTC 1 cut(s) 520
MroI TCCGGA 1 cut(s) 232
MspA1I CMGCKG 1 cut(s) 444
MspR9I CCNGG 6 cut(s) 48, 215, 397, 472, 509, 510
MvnI CGCG 4 cut(s) 16, 196, 444, 463
NciI CCSGG 6 cut(s) 48, 215, 397, 472, 509, 510
NcoI CCATGG 1 cut(s) 570
NdeII GATC 2 cut(s) 70, 344
NheI GCTAGC 2 cut(s) 589, 652
NlaIII CATG 1 cut(s) 574
NlaIV GGNNCC 5 cut(s) 167, 346, 394, 395, 401
NmeAIII GCCGAG 2 cut(s) 131, 579
PaeR7I CTCGAG 1 cut(s) 430
PciSI GCTCTTC 1 cut(s) 174
PleI GAGTC 1 cut(s) 520
PpsI GAGTC 1 cut(s) 520
PpuMI RGGWCCY 1 cut(s) 393
Psp5II RGGWCCY 1 cut(s) 393
PspFI CCCAGC 1 cut(s) 381
PspN4I GGNNCC 5 cut(s) 167, 346, 394, 395, 401
PspPI GGNCC 5 cut(s) 166, 220, 238, 393, 399
PspPPI RGGWCCY 1 cut(s) 393
PspXI VCTCGAGB 1 cut(s) 430
PsuI RGATCY 2 cut(s) 70, 344
RsaI GTAC 1 cut(s) 264
RsaNI GTAC 1 cut(s) 263
SacII CCGCGG 1 cut(s) 445
SalI GTCGAC 1 cut(s) 523
SapI GCTCTTC 1 cut(s) 174
Sau3AI GATC 2 cut(s) 70, 344
Sau96I GGNCC 5 cut(s) 166, 220, 238, 393, 399
SchI GAGTC 1 cut(s) 520
ScrFI CCNGG 6 cut(s) 48, 215, 397, 472, 509, 510
SduI GDGCHC 2 cut(s) 186, 388
SetI ASST 6 cut(s) 163, 194, 283, 292, 356, 437
SfaNI GCATC 1 cut(s) 284
Sfr274I CTCGAG 1 cut(s) 430
Sfr303I CCGCGG 1 cut(s) 445
SgrBI CCGCGG 1 cut(s) 445
SinI GGWCC 4 cut(s) 166, 238, 393, 399
SlaI CTCGAG 1 cut(s) 430
SmaI CCCGGG 1 cut(s) 510
SmlI CTYRAG 1 cut(s) 430
SmoI CTYRAG 1 cut(s) 430
SspI AATATT 1 cut(s) 92
SspMI CTAG 4 cut(s) 560, 590, 653, 709
StyD4I CCNGG 6 cut(s) 46, 213, 395, 470, 507, 508
StyI CCWWGG 4 cut(s) 286, 570, 616, 678
TaaI ACNGT 1 cut(s) 522
TaiI ACGT 1 cut(s) 194
TaqI TCGA 2 cut(s) 431, 524
TaqII GACCGA 1 cut(s) 255
TauI GCSGC 7 cut(s) 19, 59, 175, 221, 447, 463, 470
TscAI CASTG 1 cut(s) 145
TseI GCWGC 3 cut(s) 25, 371, 435
TspGWI ACGGA 2 cut(s) 337, 493
TspMI CCCGGG 1 cut(s) 508
TspRI CASTG 1 cut(s) 145
VpaK11BI GGWCC 4 cut(s) 166, 238, 393, 399
XhoI CTCGAG 1 cut(s) 430
XmaI CCCGGG 1 cut(s) 508
XmiI GTMKAC 1 cut(s) 524
XspI CTAG 4 cut(s) 560, 590, 653, 709
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.