protein Sb1514s002020 source
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 2 cut(s) | 56, 243 |
| AccI | GTMKAC | 1 cut(s) | 313 |
| AccII | CGCG | 3 cut(s) | 16, 234, 253 |
| AciI | CCGC | 8 cut(s) | 16, 19, 51, 56, 232, 234, 243, 251 |
| AcoI | YGGCCR | 2 cut(s) | 57, 259 |
| AfaI | GTAC | 1 cut(s) | 328 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 121, 257 |
| AgsI | TTSAA | 3 cut(s) | 96, 110, 307 |
| AjnI | CCWGG | 1 cut(s) | 33 |
| AluBI | AGCT | 1 cut(s) | 225 |
| AluI | AGCT | 1 cut(s) | 225 |
| Ama87I | CYCGRG | 3 cut(s) | 164, 220, 297 |
| AoxI | GGCC | 3 cut(s) | 57, 112, 259 |
| ApeKI | GCWGC | 2 cut(s) | 25, 225 |
| AspLEI | GCGC | 1 cut(s) | 16 |
| AspS9I | GGNCC | 1 cut(s) | 183 |
| AsuC2I | CCSGG | 4 cut(s) | 48, 263, 298, 299 |
| AsuHPI | GGTGA | 1 cut(s) | 223 |
| AvaI | CYCGRG | 3 cut(s) | 164, 220, 297 |
| AvaII | GGWCC | 1 cut(s) | 183 |
| BaeGI | GKGCMC | 1 cut(s) | 178 |
| BanII | GRGCYC | 1 cut(s) | 48 |
| BbvI | GCAGC | 2 cut(s) | 12, 212 |
| BceAI | ACGGC | 2 cut(s) | 44, 157 |
| BciT130I | CCWGG | 1 cut(s) | 35 |
| BcnI | CCSGG | 4 cut(s) | 48, 263, 298, 299 |
| BglII | AGATCT | 1 cut(s) | 70 |
| BisI | GCNGC | 6 cut(s) | 17, 26, 57, 226, 235, 251 |
| BlsI | GCNGC | 6 cut(s) | 18, 27, 58, 227, 236, 252 |
| Bme1390I | CCNGG | 5 cut(s) | 35, 48, 263, 298, 299 |
| Bme18I | GGWCC | 1 cut(s) | 183 |
| BmeT110I | CYCGRG | 3 cut(s) | 164, 220, 297 |
| BmgT120I | GGNCC | 1 cut(s) | 183 |
| BmiI | GGNNCC | 3 cut(s) | 131, 184, 185 |
| BmrFI | CCNGG | 5 cut(s) | 35, 48, 263, 298, 299 |
| BmrI | ACTGGG | 2 cut(s) | 181, 282 |
| BmuI | ACTGGG | 2 cut(s) | 181, 282 |
| BpuMI | CCSGG | 4 cut(s) | 48, 263, 298, 299 |
| BsaJI | CCNNGG | 4 cut(s) | 34, 232, 262, 297 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 45, 75 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 121, 257 |
| Bse118I | RCCGGY | 1 cut(s) | 257 |
| Bse1I | ACTGG | 3 cut(s) | 187, 277, 328 |
| BseBI | CCWGG | 1 cut(s) | 35 |
| BseDI | CCNNGG | 4 cut(s) | 34, 232, 262, 297 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 121, 257 |
| BseMII | CTCAG | 1 cut(s) | 331 |
| BseNI | ACTGG | 3 cut(s) | 187, 277, 328 |
| BseSI | GKGCMC | 1 cut(s) | 178 |
| BseX3I | CGGCCG | 2 cut(s) | 57, 259 |
| BseXI | GCAGC | 2 cut(s) | 12, 212 |
| BseYI | CCCAGC | 1 cut(s) | 171 |
| BsgI | GTGCAG | 1 cut(s) | 87 |
| Bsh1236I | CGCG | 3 cut(s) | 16, 234, 253 |
| Bsh1285I | CGRYCG | 3 cut(s) | 23, 60, 262 |
| BshFI | GGCC | 3 cut(s) | 59, 114, 261 |
| BsiEI | CGRYCG | 3 cut(s) | 23, 60, 262 |
| BsiHKCI | CYCGRG | 3 cut(s) | 164, 220, 297 |
| BsiSI | CCGG | 4 cut(s) | 48, 258, 262, 298 |
| BslFI | GGGAC | 3 cut(s) | 169, 175, 279 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 121, 257 |
| BsmFI | GGGAC | 3 cut(s) | 169, 175, 279 |
| BsnI | GGCC | 3 cut(s) | 59, 114, 261 |
| BsoBI | CYCGRG | 3 cut(s) | 164, 220, 297 |
| Bsp1286I | GDGCHC | 2 cut(s) | 48, 178 |
| Bsp143I | GATC | 1 cut(s) | 70 |
| BspACI | CCGC | 8 cut(s) | 16, 19, 51, 56, 232, 234, 243, 251 |
| BspANI | GGCC | 3 cut(s) | 59, 114, 261 |
| BspCNI | CTCAG | 1 cut(s) | 330 |
| BspFNI | CGCG | 3 cut(s) | 16, 234, 253 |
| BspLI | GGNNCC | 3 cut(s) | 131, 184, 185 |
| BsrBI | CCGCTC | 2 cut(s) | 56, 243 |
| BsrFI | RCCGGY | 1 cut(s) | 257 |
| BsrI | ACTGG | 3 cut(s) | 187, 277, 328 |
| BssAI | RCCGGY | 1 cut(s) | 257 |
| BssECI | CCNNGG | 4 cut(s) | 34, 232, 262, 297 |
| BssMI | GATC | 1 cut(s) | 70 |
| Bst2UI | CCWGG | 1 cut(s) | 35 |
| Bst4CI | ACNGT | 2 cut(s) | 311, 349 |
| Bst6I | CTCTTC | 1 cut(s) | 112 |
| BstC8I | GCNNGC | 2 cut(s) | 255, 259 |
| BstDEI | CTNAG | 1 cut(s) | 317 |
| BstDSI | CCRYGG | 1 cut(s) | 232 |
| BstFNI | CGCG | 3 cut(s) | 16, 234, 253 |
| BstHHI | GCGC | 1 cut(s) | 16 |
| BstKTI | GATC | 1 cut(s) | 73 |
| BstMBI | GATC | 1 cut(s) | 70 |
| BstMCI | CGRYCG | 3 cut(s) | 23, 60, 262 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 22, 25, 65, 225, 231, 234, 240 |
| BstNI | CCWGG | 1 cut(s) | 35 |
| BstSCI | CCNGG | 5 cut(s) | 33, 46, 261, 296, 297 |
| BstSLI | GKGCMC | 1 cut(s) | 178 |
| BstUI | CGCG | 3 cut(s) | 16, 234, 253 |
| BstV1I | GCAGC | 2 cut(s) | 12, 212 |
| BstX2I | RGATCY | 1 cut(s) | 70 |
| BstYI | RGATCY | 1 cut(s) | 70 |
| BstZI | CGGCCG | 2 cut(s) | 57, 259 |
| BsuRI | GGCC | 3 cut(s) | 59, 114, 261 |
| BtgI | CCRYGG | 1 cut(s) | 232 |
| Cac8I | GCNNGC | 2 cut(s) | 255, 259 |
| CfoI | GCGC | 1 cut(s) | 16 |
| Cfr10I | RCCGGY | 1 cut(s) | 257 |
| Cfr13I | GGNCC | 1 cut(s) | 183 |
| Cfr42I | CCGCGG | 1 cut(s) | 235 |
| Cfr9I | CCCGGG | 1 cut(s) | 297 |
| Csp6I | GTAC | 1 cut(s) | 327 |
| CviAII | CATG | 2 cut(s) | 134, 153 |
| CviJI | RGCY | 9 cut(s) | 46, 59, 114, 163, 171, 205, 225, 261, 292 |
| CviKI_1 | RGCY | 9 cut(s) | 46, 59, 114, 163, 171, 205, 225, 261, 292 |
| CviQI | GTAC | 1 cut(s) | 327 |
| DdeI | CTNAG | 1 cut(s) | 317 |
| DpnI | GATC | 1 cut(s) | 72 |
| DpnII | GATC | 1 cut(s) | 70 |
| EaeI | YGGCCR | 2 cut(s) | 57, 259 |
| EagI | CGGCCG | 2 cut(s) | 57, 259 |
| Eam1104I | CTCTTC | 1 cut(s) | 112 |
| EarI | CTCTTC | 1 cut(s) | 112 |
| EciI | GGCGGA | 1 cut(s) | 66 |
| EclXI | CGGCCG | 2 cut(s) | 57, 259 |
| Eco24I | GRGCYC | 1 cut(s) | 48 |
| Eco47I | GGWCC | 1 cut(s) | 183 |
| Eco52I | CGGCCG | 2 cut(s) | 57, 259 |
| Eco88I | CYCGRG | 3 cut(s) | 164, 220, 297 |
| EcoO109I | RGGNCCY | 1 cut(s) | 183 |
| EcoRII | CCWGG | 1 cut(s) | 33 |
| EcoT38I | GRGCYC | 1 cut(s) | 48 |
| FaeI | CATG | 2 cut(s) | 137, 156 |
| FaiI | YATR | 2 cut(s) | 135, 154 |
| FaqI | GGGAC | 3 cut(s) | 169, 175, 279 |
| FatI | CATG | 2 cut(s) | 133, 152 |
| FauI | CCCGC | 1 cut(s) | 236 |
| FblI | GTMKAC | 1 cut(s) | 313 |
| Fnu4HI | GCNGC | 6 cut(s) | 17, 26, 57, 226, 235, 251 |
| FriOI | GRGCYC | 1 cut(s) | 48 |
| Fsp4HI | GCNGC | 6 cut(s) | 17, 26, 57, 226, 235, 251 |
| GlaI | GCGC | 1 cut(s) | 15 |
| GluI | GCNGC | 6 cut(s) | 17, 26, 57, 226, 235, 251 |
| GsaI | CCCAGC | 1 cut(s) | 175 |
| HaeIII | GGCC | 3 cut(s) | 59, 114, 261 |
| HapII | CCGG | 4 cut(s) | 48, 258, 262, 298 |
| HhaI | GCGC | 1 cut(s) | 16 |
| Hin1II | CATG | 2 cut(s) | 137, 156 |
| Hin6I | GCGC | 1 cut(s) | 14 |
| HinP1I | GCGC | 1 cut(s) | 14 |
| HincII | GTYRAC | 1 cut(s) | 314 |
| HindII | GTYRAC | 1 cut(s) | 314 |
| HinfI | GANTC | 2 cut(s) | 315, 340 |
| HpaII | CCGG | 4 cut(s) | 48, 258, 262, 298 |
| HphI | GGTGA | 1 cut(s) | 223 |
| Hpy166II | GTNNAC | 3 cut(s) | 139, 214, 314 |
| Hpy188I | TCNGA | 2 cut(s) | 320, 345 |
| Hpy188III | TCNNGA | 1 cut(s) | 192 |
| Hpy8I | GTNNAC | 3 cut(s) | 139, 214, 314 |
| Hpy99I | CGWCG | 2 cut(s) | 65, 204 |
| HpyAV | CCTTC | 2 cut(s) | 104, 294 |
| HpyCH4III | ACNGT | 2 cut(s) | 311, 349 |
| HpyCH4V | TGCA | 3 cut(s) | 28, 68, 150 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 22, 25, 65, 225, 231, 234, 240 |
| HpyF3I | CTNAG | 1 cut(s) | 317 |
| Hsp92II | CATG | 2 cut(s) | 137, 156 |
| HspAI | GCGC | 1 cut(s) | 14 |
| KflI | GGGWCCC | 1 cut(s) | 183 |
| KroI | GCCGGC | 1 cut(s) | 257 |
| KroNI | GCCGGC | 1 cut(s) | 259 |
| KspI | CCGCGG | 1 cut(s) | 235 |
| Kzo9I | GATC | 1 cut(s) | 70 |
| LmnI | GCTCC | 2 cut(s) | 53, 286 |
| Lsp1109I | GCAGC | 2 cut(s) | 12, 212 |
| MalI | GATC | 1 cut(s) | 72 |
| MbiI | CCGCTC | 2 cut(s) | 56, 243 |
| MboI | GATC | 1 cut(s) | 70 |
| MboII | GAAGA | 1 cut(s) | 129 |
| MflI | RGATCY | 1 cut(s) | 70 |
| MhlI | GDGCHC | 2 cut(s) | 48, 178 |
| MlyI | GAGTC | 1 cut(s) | 309 |
| MnlI | CCTC | 3 cut(s) | 3, 113, 160 |
| MroNI | GCCGGC | 1 cut(s) | 257 |
| MseI | TTAA | 1 cut(s) | 352 |
| MspA1I | CMGCKG | 1 cut(s) | 234 |
| MspI | CCGG | 4 cut(s) | 48, 258, 262, 298 |
| MspR9I | CCNGG | 5 cut(s) | 35, 48, 263, 298, 299 |
| MvaI | CCWGG | 1 cut(s) | 35 |
| MvnI | CGCG | 3 cut(s) | 16, 234, 253 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 22, 25, 65, 225, 231, 234, 240 |
| NaeI | GCCGGC | 1 cut(s) | 259 |
| NciI | CCSGG | 4 cut(s) | 48, 263, 298, 299 |
| NdeII | GATC | 1 cut(s) | 70 |
| NgoMIV | GCCGGC | 1 cut(s) | 257 |
| NlaIII | CATG | 2 cut(s) | 137, 156 |
| NlaIV | GGNNCC | 3 cut(s) | 131, 184, 185 |
| PaeR7I | CTCGAG | 2 cut(s) | 164, 220 |
| PdiI | GCCGGC | 1 cut(s) | 259 |
| PfeI | GAWTC | 1 cut(s) | 340 |
| PkrI | GCNGC | 6 cut(s) | 18, 27, 58, 227, 236, 252 |
| PleI | GAGTC | 1 cut(s) | 309 |
| PpsI | GAGTC | 1 cut(s) | 309 |
| PpuMI | RGGWCCY | 1 cut(s) | 183 |
| Psp5II | RGGWCCY | 1 cut(s) | 183 |
| Psp6I | CCWGG | 1 cut(s) | 33 |
| PspFI | CCCAGC | 1 cut(s) | 171 |
| PspGI | CCWGG | 1 cut(s) | 33 |
| PspN4I | GGNNCC | 3 cut(s) | 131, 184, 185 |
| PspPI | GGNCC | 1 cut(s) | 183 |
| PspPPI | RGGWCCY | 1 cut(s) | 183 |
| PspXI | VCTCGAGB | 2 cut(s) | 164, 220 |
| PsuI | RGATCY | 1 cut(s) | 70 |
| RsaI | GTAC | 1 cut(s) | 328 |
| RsaNI | GTAC | 1 cut(s) | 327 |
| SacII | CCGCGG | 1 cut(s) | 235 |
| SalI | GTCGAC | 1 cut(s) | 312 |
| SaqAI | TTAA | 1 cut(s) | 352 |
| SatI | GCNGC | 6 cut(s) | 17, 26, 57, 226, 235, 251 |
| Sau3AI | GATC | 1 cut(s) | 70 |
| Sau96I | GGNCC | 1 cut(s) | 183 |
| SchI | GAGTC | 1 cut(s) | 309 |
| ScrFI | CCNGG | 5 cut(s) | 35, 48, 263, 298, 299 |
| SduI | GDGCHC | 2 cut(s) | 48, 178 |
| SetI | ASST | 3 cut(s) | 36, 131, 227 |
| Sfr274I | CTCGAG | 2 cut(s) | 164, 220 |
| Sfr303I | CCGCGG | 1 cut(s) | 235 |
| SgrBI | CCGCGG | 1 cut(s) | 235 |
| SinI | GGWCC | 1 cut(s) | 183 |
| SlaI | CTCGAG | 2 cut(s) | 164, 220 |
| SmaI | CCCGGG | 1 cut(s) | 299 |
| SmlI | CTYRAG | 2 cut(s) | 164, 220 |
| SmoI | CTYRAG | 2 cut(s) | 164, 220 |
| SsiI | CCGC | 8 cut(s) | 16, 19, 51, 56, 232, 234, 243, 251 |
| SspI | AATATT | 1 cut(s) | 92 |
| StyD4I | CCNGG | 5 cut(s) | 33, 46, 261, 296, 297 |
| TaaI | ACNGT | 2 cut(s) | 311, 349 |
| TaqI | TCGA | 3 cut(s) | 165, 221, 313 |
| TauI | GCSGC | 4 cut(s) | 19, 59, 237, 253 |
| TfiI | GAWTC | 1 cut(s) | 340 |
| Tru1I | TTAA | 1 cut(s) | 352 |
| Tru9I | TTAA | 1 cut(s) | 352 |
| TseI | GCWGC | 2 cut(s) | 25, 225 |
| TspGWI | ACGGA | 2 cut(s) | 283, 344 |
| TspMI | CCCGGG | 1 cut(s) | 297 |
| VpaK11BI | GGWCC | 1 cut(s) | 183 |
| XhoI | CTCGAG | 2 cut(s) | 164, 220 |
| XmaI | CCCGGG | 1 cut(s) | 297 |
| XmiI | GTMKAC | 1 cut(s) | 313 |