Rroxscaffold_66G00437570

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000066
OG0000104
Physical Location & Seq
Forward (+)
1650 .. 2490
841 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_66G00437570.1

Sequence Viewer

Length: 414 bp
ATGCGGGATGAACCGGGAAGCCGGTTACGTGCCCAACTACGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTCCTGCCCACCCCGGAAACGGCTCAGCCCGAGGTAGGGTCCAGCGGCCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGCGCGCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGTCGTACTCATAACCGCATCAGTCTCCAAGGTGAACAGCCTCTGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCTGGGCACGGGGGTCCCGGCCCCGAACCCGTCGGCTGTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

137

Amino Acids

15.17

Weight (kDa)

11.97

Isoelectric Point (pI)

68.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 3 cut(s) 42, 190, 204
AccIII TCCGGA 1 cut(s) 225
AciI CCGC 6 cut(s) 4, 113, 166, 181, 211, 267
AclWI GGATC 2 cut(s) 331, 344
AcoI YGGCCR 1 cut(s) 167
AfaI GTAC 1 cut(s) 258
AfiI CCNNNNNNNGG 5 cut(s) 62, 140, 156, 157, 169
AgsI TTSAA 1 cut(s) 220
AjiI CACGTC 1 cut(s) 186
Alw21I GWGCWC 1 cut(s) 180
Alw26I GTCTC 1 cut(s) 280
AlwI GGATC 2 cut(s) 331, 344
AlwNI CAGNNNCTG 1 cut(s) 294
Ama87I CYCGRG 3 cut(s) 150, 347, 364
Aor13HI TCCGGA 1 cut(s) 225
AoxI GGCC 3 cut(s) 167, 212, 388
AscI GGCGCGCC 1 cut(s) 202
AspLEI GCGC 3 cut(s) 44, 204, 206
AspS9I GGNCC 5 cut(s) 160, 213, 231, 383, 389
AsuC2I CCSGG 5 cut(s) 15, 135, 208, 251, 387
AsuHPI GGTGA 1 cut(s) 295
AvaI CYCGRG 3 cut(s) 150, 347, 364
AvaII GGWCC 3 cut(s) 160, 231, 383
BaeGI GKGCMC 2 cut(s) 34, 378
BamHI GGATCC 1 cut(s) 336
Bbv12I GWGCWC 1 cut(s) 180
BceAI ACGGC 1 cut(s) 157
BcnI CCSGG 5 cut(s) 15, 135, 208, 251, 387
BcoDI GTCTC 1 cut(s) 280
BfaI CTAG 1 cut(s) 50
BisI GCNGC 2 cut(s) 167, 212
BlpI GCTNAGC 1 cut(s) 145
BlsI GCNGC 2 cut(s) 168, 213
Bme1390I CCNGG 5 cut(s) 15, 135, 208, 251, 387
Bme18I GGWCC 3 cut(s) 160, 231, 383
BmeT110I CYCGRG 3 cut(s) 150, 347, 364
BmgBI CACGTC 1 cut(s) 186
BmgT120I GGNCC 5 cut(s) 160, 213, 231, 383, 389
BmiI GGNNCC 5 cut(s) 161, 338, 384, 385, 391
BmrFI CCNGG 5 cut(s) 15, 135, 208, 251, 387
BmsI GCATC 1 cut(s) 278
BoxI GACNNNNGTC 1 cut(s) 93
Bpu10I CCTNAGC 1 cut(s) 116
Bpu1102I GCTNAGC 1 cut(s) 145
BpuMI CCSGG 5 cut(s) 15, 135, 208, 251, 387
BsaAI YACGTR 1 cut(s) 29
BsaJI CCNNGG 4 cut(s) 133, 151, 279, 346
BsaWI WCCGGW 1 cut(s) 225
Bsc4I CCNNNNNNNGG 5 cut(s) 62, 140, 156, 157, 169
Bse118I RCCGGY 1 cut(s) 21
BseAI TCCGGA 1 cut(s) 225
BseDI CCNNGG 4 cut(s) 133, 151, 279, 346
BseGI GGATG 1 cut(s) 13
BseLI CCNNNNNNNGG 5 cut(s) 62, 140, 156, 157, 169
BseMII CTCAG 1 cut(s) 159
BsePI GCGCGC 1 cut(s) 202
BseSI GKGCMC 2 cut(s) 34, 378
BseX3I CGGCCG 1 cut(s) 167
BseYI CCCAGC 1 cut(s) 371
Bsh1236I CGCG 3 cut(s) 42, 190, 204
Bsh1285I CGRYCG 2 cut(s) 170, 255
BshFI GGCC 3 cut(s) 169, 214, 390
BsiEI CGRYCG 2 cut(s) 170, 255
BsiHKAI GWGCWC 1 cut(s) 180
BsiHKCI CYCGRG 3 cut(s) 150, 347, 364
BsiSI CCGG 9 cut(s) 14, 22, 135, 170, 199, 208, 226, 251, 387
BslFI GGGAC 1 cut(s) 369
BslI CCNNNNNNNGG 5 cut(s) 62, 140, 156, 157, 169
BsmAI GTCTC 1 cut(s) 280
BsmFI GGGAC 1 cut(s) 369
BsnI GGCC 3 cut(s) 169, 214, 390
BsoBI CYCGRG 3 cut(s) 150, 347, 364
Bsp1286I GDGCHC 3 cut(s) 34, 180, 378
Bsp13I TCCGGA 1 cut(s) 225
Bsp143I GATC 1 cut(s) 336
Bsp1720I GCTNAGC 1 cut(s) 145
BspACI CCGC 6 cut(s) 4, 113, 166, 181, 211, 267
BspANI GGCC 3 cut(s) 169, 214, 390
BspCNI CTCAG 1 cut(s) 158
BspEI TCCGGA 1 cut(s) 225
BspFNI CGCG 3 cut(s) 42, 190, 204
BspLI GGNNCC 5 cut(s) 161, 338, 384, 385, 391
BspPI GGATC 2 cut(s) 331, 344
BspQI GCTCTTC 1 cut(s) 168
BsrFI RCCGGY 1 cut(s) 21
BssAI RCCGGY 1 cut(s) 21
BssECI CCNNGG 4 cut(s) 133, 151, 279, 346
BssHII GCGCGC 1 cut(s) 202
BssMI GATC 1 cut(s) 336
BssT1I CCWWGG 1 cut(s) 279
Bst4CI ACNGT 1 cut(s) 92
Bst6I CTCTTC 1 cut(s) 168
BstBAI YACGTR 1 cut(s) 29
BstC8I GCNNGC 1 cut(s) 204
BstDEI CTNAG 2 cut(s) 116, 145
BstF5I GGATG 1 cut(s) 13
BstFNI CGCG 3 cut(s) 42, 190, 204
BstHHI GCGC 3 cut(s) 44, 204, 206
BstKTI GATC 1 cut(s) 339
BstMAI GTCTC 1 cut(s) 280
BstMBI GATC 1 cut(s) 336
BstMCI CGRYCG 2 cut(s) 170, 255
BstMWI GCNNNNNNNGC 3 cut(s) 175, 208, 246
BstPAI GACNNNNGTC 1 cut(s) 93
BstSCI CCNGG 5 cut(s) 13, 133, 206, 249, 385
BstSLI GKGCMC 2 cut(s) 34, 378
BstUI CGCG 3 cut(s) 42, 190, 204
BstX2I RGATCY 1 cut(s) 336
BstYI RGATCY 1 cut(s) 336
BstZI CGGCCG 1 cut(s) 167
BsuRI GGCC 3 cut(s) 169, 214, 390
BtrI CACGTC 1 cut(s) 186
BtsCI GGATG 1 cut(s) 13
Cac8I GCNNGC 1 cut(s) 204
CaiI CAGNNNCTG 1 cut(s) 294
CfoI GCGC 3 cut(s) 44, 204, 206
Cfr10I RCCGGY 1 cut(s) 21
Cfr13I GGNCC 5 cut(s) 160, 213, 231, 383, 389
Csp6I GTAC 1 cut(s) 257
CviAII CATG 1 cut(s) 98
CviQI GTAC 1 cut(s) 257
DdeI CTNAG 2 cut(s) 116, 145
DpnI GATC 1 cut(s) 338
DpnII GATC 1 cut(s) 336
EaeI YGGCCR 1 cut(s) 167
EagI CGGCCG 1 cut(s) 167
Eam1104I CTCTTC 1 cut(s) 168
EarI CTCTTC 1 cut(s) 168
EclXI CGGCCG 1 cut(s) 167
Eco130I CCWWGG 1 cut(s) 279
Eco47I GGWCC 3 cut(s) 160, 231, 383
Eco52I CGGCCG 1 cut(s) 167
Eco88I CYCGRG 3 cut(s) 150, 347, 364
EcoO109I RGGNCCY 1 cut(s) 383
EcoT14I CCWWGG 1 cut(s) 279
ErhI CCWWGG 1 cut(s) 279
FaeI CATG 1 cut(s) 101
FaiI YATR 2 cut(s) 99, 263
FaqI GGGAC 1 cut(s) 369
FatI CATG 1 cut(s) 97
Fnu4HI GCNGC 2 cut(s) 167, 212
FokI GGATG 1 cut(s) 20
Fsp4HI GCNGC 2 cut(s) 167, 212
FspBI CTAG 1 cut(s) 50
GlaI GCGC 3 cut(s) 43, 203, 205
GluI GCNGC 2 cut(s) 167, 212
GsaI CCCAGC 1 cut(s) 375
HaeIII GGCC 3 cut(s) 169, 214, 390
HapII CCGG 9 cut(s) 14, 22, 135, 170, 199, 208, 226, 251, 387
HhaI GCGC 3 cut(s) 44, 204, 206
Hin1II CATG 1 cut(s) 101
Hin6I GCGC 3 cut(s) 42, 202, 204
HinP1I GCGC 3 cut(s) 42, 202, 204
HinfI GANTC 1 cut(s) 121
HpaII CCGG 9 cut(s) 14, 22, 135, 170, 199, 208, 226, 251, 387
HphI GGTGA 1 cut(s) 295
Hpy166II GTNNAC 1 cut(s) 286
Hpy188III TCNNGA 2 cut(s) 226, 349
Hpy8I GTNNAC 1 cut(s) 286
Hpy99I CGWCG 2 cut(s) 190, 404
HpyCH4III ACNGT 1 cut(s) 92
HpyCH4IV ACGT 2 cut(s) 28, 185
HpyF10VI GCNNNNNNNGC 3 cut(s) 175, 208, 246
HpyF3I CTNAG 2 cut(s) 116, 145
HpySE526I ACGT 2 cut(s) 28, 185
Hsp92II CATG 1 cut(s) 101
HspAI GCGC 3 cut(s) 42, 202, 204
KflI GGGWCCC 1 cut(s) 383
Kpn2I TCCGGA 1 cut(s) 225
Kzo9I GATC 1 cut(s) 336
LguI GCTCTTC 1 cut(s) 168
LweI GCATC 1 cut(s) 278
MaeI CTAG 1 cut(s) 50
MaeII ACGT 2 cut(s) 28, 185
MaeIII GTNAC 2 cut(s) 24, 341
MalI GATC 1 cut(s) 338
MboI GATC 1 cut(s) 336
MboII GAAGA 1 cut(s) 185
MflI RGATCY 1 cut(s) 336
MhlI GDGCHC 3 cut(s) 34, 180, 378
MlyI GAGTC 1 cut(s) 130
MnlI CCTC 5 cut(s) 146, 222, 302, 356, 360
MroI TCCGGA 1 cut(s) 225
MseI TTAA 1 cut(s) 77
MspA1I CMGCKG 1 cut(s) 166
MspI CCGG 9 cut(s) 14, 22, 135, 170, 199, 208, 226, 251, 387
MspR9I CCNGG 5 cut(s) 15, 135, 208, 251, 387
MvnI CGCG 3 cut(s) 42, 190, 204
MwoI GCNNNNNNNGC 3 cut(s) 175, 208, 246
NciI CCSGG 5 cut(s) 15, 135, 208, 251, 387
NdeII GATC 1 cut(s) 336
NlaIII CATG 1 cut(s) 101
NlaIV GGNNCC 5 cut(s) 161, 338, 384, 385, 391
PaeR7I CTCGAG 1 cut(s) 364
PalAI GGCGCGCC 1 cut(s) 202
PauI GCGCGC 1 cut(s) 202
PciSI GCTCTTC 1 cut(s) 168
PkrI GCNGC 2 cut(s) 168, 213
PleI GAGTC 1 cut(s) 129
PpsI GAGTC 1 cut(s) 129
Ppu21I YACGTR 1 cut(s) 29
PpuMI RGGWCCY 1 cut(s) 383
PshAI GACNNNNGTC 1 cut(s) 93
Psp5II RGGWCCY 1 cut(s) 383
PspFI CCCAGC 1 cut(s) 371
PspN4I GGNNCC 5 cut(s) 161, 338, 384, 385, 391
PspPI GGNCC 5 cut(s) 160, 213, 231, 383, 389
PspPPI RGGWCCY 1 cut(s) 383
PspXI VCTCGAGB 1 cut(s) 364
PstNI CAGNNNCTG 1 cut(s) 294
PsuI RGATCY 1 cut(s) 336
PteI GCGCGC 1 cut(s) 202
RsaI GTAC 1 cut(s) 258
RsaNI GTAC 1 cut(s) 257
SapI GCTCTTC 1 cut(s) 168
SaqAI TTAA 1 cut(s) 77
SatI GCNGC 2 cut(s) 167, 212
Sau3AI GATC 1 cut(s) 336
Sau96I GGNCC 5 cut(s) 160, 213, 231, 383, 389
SchI GAGTC 1 cut(s) 130
ScrFI CCNGG 5 cut(s) 15, 135, 208, 251, 387
SduI GDGCHC 3 cut(s) 34, 180, 378
SetI ASST 6 cut(s) 31, 51, 157, 188, 285, 348
SfaNI GCATC 1 cut(s) 278
Sfr274I CTCGAG 1 cut(s) 364
SgsI GGCGCGCC 1 cut(s) 202
SinI GGWCC 3 cut(s) 160, 231, 383
SlaI CTCGAG 1 cut(s) 364
SmlI CTYRAG 1 cut(s) 364
SmoI CTYRAG 1 cut(s) 364
SsiI CCGC 6 cut(s) 4, 113, 166, 181, 211, 267
SspMI CTAG 1 cut(s) 50
StyD4I CCNGG 5 cut(s) 13, 133, 206, 249, 385
StyI CCWWGG 1 cut(s) 279
TaaI ACNGT 1 cut(s) 92
TaiI ACGT 2 cut(s) 31, 188
TaqI TCGA 3 cut(s) 73, 106, 365
TaqII GACCGA 1 cut(s) 248
TauI GCSGC 2 cut(s) 169, 214
Tru1I TTAA 1 cut(s) 77
Tru9I TTAA 1 cut(s) 77
TspDTI ATGAA 1 cut(s) 24
TspGWI ACGGA 1 cut(s) 329
VpaK11BI GGWCC 3 cut(s) 160, 231, 383
XhoI CTCGAG 1 cut(s) 364
XspI CTAG 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.