Rroxscaffold_66G00437730

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000066
OG0000104
Physical Location & Seq
Forward (+)
141120 .. 141886
767 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_66G00437730.1

Sequence Viewer

Length: 531 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCCGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGCCTGCCCACCCCGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGCTTTCCCCGGCGTTCAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

176

Amino Acids

18.76

Weight (kDa)

11.39

Isoelectric Point (pI)

50.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 202
AccBSI CCGCTC 2 cut(s) 56, 415
AccI GTMKAC 1 cut(s) 486
AccII CGCG 4 cut(s) 16, 223, 406, 425
AccIII TCCGGA 1 cut(s) 259
AclWI GGATC 2 cut(s) 303, 316
AcoI YGGCCR 2 cut(s) 57, 431
AfaI GTAC 1 cut(s) 501
AfiI CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 290, 429, 436, 440
AgsI TTSAA 4 cut(s) 96, 110, 254, 480
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 1 cut(s) 33
AluBI AGCT 1 cut(s) 397
AluI AGCT 1 cut(s) 397
Alw21I GWGCWC 1 cut(s) 213
AlwI GGATC 2 cut(s) 303, 316
AlwNI CAGNNNCTG 1 cut(s) 202
Ama87I CYCGRG 3 cut(s) 319, 336, 392
Aor13HI TCCGGA 1 cut(s) 259
AoxI GGCC 5 cut(s) 57, 112, 155, 246, 431
ApeKI GCWGC 2 cut(s) 25, 397
AspLEI GCGC 2 cut(s) 16, 239
AspS9I GGNCC 4 cut(s) 193, 247, 265, 355
AsuC2I CCSGG 6 cut(s) 48, 168, 242, 285, 435, 472
AsuHPI GGTGA 1 cut(s) 395
AvaI CYCGRG 3 cut(s) 319, 336, 392
AvaII GGWCC 3 cut(s) 193, 265, 355
BaeGI GKGCMC 1 cut(s) 350
BamHI GGATCC 1 cut(s) 308
BanII GRGCYC 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 213
BbvI GCAGC 2 cut(s) 12, 384
BceAI ACGGC 3 cut(s) 44, 157, 190
BciT130I CCWGG 1 cut(s) 35
BcnI CCSGG 6 cut(s) 48, 168, 242, 285, 435, 472
BglI GCCNNNNNGGC 1 cut(s) 245
BglII AGATCT 1 cut(s) 70
BisI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 398, 407, 423
BlpI GCTNAGC 1 cut(s) 178
BlsI GCNGC 8 cut(s) 18, 27, 58, 201, 247, 399, 408, 424
Bme1390I CCNGG 7 cut(s) 35, 48, 168, 242, 285, 435, 472
Bme18I GGWCC 3 cut(s) 193, 265, 355
BmeT110I CYCGRG 3 cut(s) 319, 336, 392
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 4 cut(s) 193, 247, 265, 355
BmiI GGNNCC 5 cut(s) 131, 194, 310, 356, 357
BmrFI CCNGG 7 cut(s) 35, 48, 168, 242, 285, 435, 472
BmrI ACTGGG 2 cut(s) 353, 455
BmuI ACTGGG 2 cut(s) 353, 455
Bpu1102I GCTNAGC 1 cut(s) 178
BpuMI CCSGG 6 cut(s) 48, 168, 242, 285, 435, 472
BsaJI CCNNGG 7 cut(s) 34, 166, 240, 318, 404, 434, 470
BsaWI WCCGGW 2 cut(s) 231, 259
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 177, 207
Bsc4I CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 290, 429, 436, 440
Bse118I RCCGGY 1 cut(s) 429
Bse1I ACTGG 3 cut(s) 359, 450, 501
BseAI TCCGGA 1 cut(s) 259
BseBI CCWGG 1 cut(s) 35
BseDI CCNNGG 7 cut(s) 34, 166, 240, 318, 404, 434, 470
BseLI CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 290, 429, 436, 440
BseMII CTCAG 2 cut(s) 192, 504
BseNI ACTGG 3 cut(s) 359, 450, 501
BseSI GKGCMC 1 cut(s) 350
BseX3I CGGCCG 2 cut(s) 57, 431
BseXI GCAGC 2 cut(s) 12, 384
BseYI CCCAGC 1 cut(s) 343
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 4 cut(s) 16, 223, 406, 425
Bsh1285I CGRYCG 3 cut(s) 23, 60, 434
BshFI GGCC 5 cut(s) 59, 114, 157, 248, 433
BsiEI CGRYCG 3 cut(s) 23, 60, 434
BsiHKAI GWGCWC 1 cut(s) 213
BsiHKCI CYCGRG 3 cut(s) 319, 336, 392
BslFI GGGAC 3 cut(s) 341, 347, 452
BslI CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 290, 429, 436, 440
BsmFI GGGAC 3 cut(s) 341, 347, 452
BsnI GGCC 5 cut(s) 59, 114, 157, 248, 433
BsoBI CYCGRG 3 cut(s) 319, 336, 392
Bsp1286I GDGCHC 3 cut(s) 48, 213, 350
Bsp13I TCCGGA 1 cut(s) 259
Bsp143I GATC 2 cut(s) 70, 308
Bsp1720I GCTNAGC 1 cut(s) 178
BspANI GGCC 5 cut(s) 59, 114, 157, 248, 433
BspCNI CTCAG 2 cut(s) 191, 503
BspEI TCCGGA 1 cut(s) 259
BspFNI CGCG 4 cut(s) 16, 223, 406, 425
BspLI GGNNCC 5 cut(s) 131, 194, 310, 356, 357
BspPI GGATC 2 cut(s) 303, 316
BspQI GCTCTTC 1 cut(s) 201
BsrBI CCGCTC 2 cut(s) 56, 415
BsrFI RCCGGY 1 cut(s) 429
BsrI ACTGG 3 cut(s) 359, 450, 501
BssAI RCCGGY 1 cut(s) 429
BssECI CCNNGG 7 cut(s) 34, 166, 240, 318, 404, 434, 470
BssMI GATC 2 cut(s) 70, 308
Bst2UI CCWGG 1 cut(s) 35
Bst4CI ACNGT 2 cut(s) 484, 522
Bst6I CTCTTC 2 cut(s) 112, 201
BstC8I GCNNGC 3 cut(s) 159, 427, 431
BstDEI CTNAG 2 cut(s) 178, 490
BstDSI CCRYGG 1 cut(s) 404
BstFNI CGCG 4 cut(s) 16, 223, 406, 425
BstHHI GCGC 2 cut(s) 16, 239
BstKTI GATC 2 cut(s) 73, 311
BstMBI GATC 2 cut(s) 70, 308
BstMCI CGRYCG 3 cut(s) 23, 60, 434
BstNI CCWGG 1 cut(s) 35
BstSCI CCNGG 7 cut(s) 33, 46, 166, 240, 283, 433, 470
BstSLI GKGCMC 1 cut(s) 350
BstUI CGCG 4 cut(s) 16, 223, 406, 425
BstV1I GCAGC 2 cut(s) 12, 384
BstX2I RGATCY 2 cut(s) 70, 308
BstYI RGATCY 2 cut(s) 70, 308
BstZI CGGCCG 2 cut(s) 57, 431
BsuRI GGCC 5 cut(s) 59, 114, 157, 248, 433
BtgI CCRYGG 1 cut(s) 404
BtrI CACGTC 1 cut(s) 219
Cac8I GCNNGC 3 cut(s) 159, 427, 431
CaiI CAGNNNCTG 1 cut(s) 202
CfoI GCGC 2 cut(s) 16, 239
Cfr10I RCCGGY 1 cut(s) 429
Cfr13I GGNCC 4 cut(s) 193, 247, 265, 355
Cfr42I CCGCGG 1 cut(s) 407
Csp6I GTAC 1 cut(s) 500
CviAII CATG 2 cut(s) 134, 153
CviQI GTAC 1 cut(s) 500
DdeI CTNAG 2 cut(s) 178, 490
DpnI GATC 2 cut(s) 72, 310
DpnII GATC 2 cut(s) 70, 308
EaeI YGGCCR 2 cut(s) 57, 431
EagI CGGCCG 2 cut(s) 57, 431
Eam1104I CTCTTC 2 cut(s) 112, 201
EarI CTCTTC 2 cut(s) 112, 201
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 2 cut(s) 57, 431
Eco24I GRGCYC 1 cut(s) 48
Eco47I GGWCC 3 cut(s) 193, 265, 355
Eco52I CGGCCG 2 cut(s) 57, 431
Eco88I CYCGRG 3 cut(s) 319, 336, 392
EcoO109I RGGNCCY 1 cut(s) 355
EcoRII CCWGG 1 cut(s) 33
EcoT38I GRGCYC 1 cut(s) 48
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 2 cut(s) 135, 154
FaqI GGGAC 3 cut(s) 341, 347, 452
FatI CATG 2 cut(s) 133, 152
FauI CCCGC 1 cut(s) 408
FblI GTMKAC 1 cut(s) 486
Fnu4HI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 398, 407, 423
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 398, 407, 423
GlaI GCGC 2 cut(s) 15, 238
GluI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 398, 407, 423
GsaI CCCAGC 1 cut(s) 347
HaeIII GGCC 5 cut(s) 59, 114, 157, 248, 433
HhaI GCGC 2 cut(s) 16, 239
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 2 cut(s) 14, 237
HinP1I GCGC 2 cut(s) 14, 237
HincII GTYRAC 1 cut(s) 487
HindII GTYRAC 1 cut(s) 487
HinfI GANTC 2 cut(s) 488, 513
HphI GGTGA 1 cut(s) 395
Hpy166II GTNNAC 3 cut(s) 139, 386, 487
Hpy188I TCNGA 2 cut(s) 493, 518
Hpy188III TCNNGA 3 cut(s) 260, 321, 364
Hpy8I GTNNAC 3 cut(s) 139, 386, 487
Hpy99I CGWCG 3 cut(s) 65, 223, 376
HpyAV CCTTC 2 cut(s) 104, 467
HpyCH4III ACNGT 2 cut(s) 484, 522
HpyCH4IV ACGT 1 cut(s) 218
HpyCH4V TGCA 3 cut(s) 28, 68, 150
HpyF3I CTNAG 2 cut(s) 178, 490
HpySE526I ACGT 1 cut(s) 218
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 2 cut(s) 14, 237
KflI GGGWCCC 1 cut(s) 355
Kpn2I TCCGGA 1 cut(s) 259
KroI GCCGGC 1 cut(s) 429
KroNI GCCGGC 1 cut(s) 431
KspI CCGCGG 1 cut(s) 407
Kzo9I GATC 2 cut(s) 70, 308
LguI GCTCTTC 1 cut(s) 201
LmnI GCTCC 2 cut(s) 53, 459
Lsp1109I GCAGC 2 cut(s) 12, 384
MaeII ACGT 1 cut(s) 218
MaeIII GTNAC 1 cut(s) 313
MalI GATC 2 cut(s) 72, 310
MbiI CCGCTC 2 cut(s) 56, 415
MboI GATC 2 cut(s) 70, 308
MboII GAAGA 2 cut(s) 129, 218
MflI RGATCY 2 cut(s) 70, 308
MhlI GDGCHC 3 cut(s) 48, 213, 350
MluCI AATT 1 cut(s) 526
MlyI GAGTC 1 cut(s) 482
MnlI CCTC 6 cut(s) 3, 113, 179, 256, 328, 332
MroI TCCGGA 1 cut(s) 259
MroNI GCCGGC 1 cut(s) 429
MseI TTAA 2 cut(s) 525, 529
MspA1I CMGCKG 2 cut(s) 199, 406
MspR9I CCNGG 7 cut(s) 35, 48, 168, 242, 285, 435, 472
MvaI CCWGG 1 cut(s) 35
MvnI CGCG 4 cut(s) 16, 223, 406, 425
NaeI GCCGGC 1 cut(s) 431
NciI CCSGG 6 cut(s) 48, 168, 242, 285, 435, 472
NdeII GATC 2 cut(s) 70, 308
NgoMIV GCCGGC 1 cut(s) 429
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 5 cut(s) 131, 194, 310, 356, 357
PacI TTAATTAA 1 cut(s) 529
PaeR7I CTCGAG 2 cut(s) 336, 392
PciSI GCTCTTC 1 cut(s) 201
PdiI GCCGGC 1 cut(s) 431
PfeI GAWTC 1 cut(s) 513
PflMI CCANNNNNTGG 1 cut(s) 202
PkrI GCNGC 8 cut(s) 18, 27, 58, 201, 247, 399, 408, 424
PleI GAGTC 1 cut(s) 482
PpsI GAGTC 1 cut(s) 482
PpuMI RGGWCCY 1 cut(s) 355
Psp5II RGGWCCY 1 cut(s) 355
Psp6I CCWGG 1 cut(s) 33
PspFI CCCAGC 1 cut(s) 343
PspGI CCWGG 1 cut(s) 33
PspN4I GGNNCC 5 cut(s) 131, 194, 310, 356, 357
PspPI GGNCC 4 cut(s) 193, 247, 265, 355
PspPPI RGGWCCY 1 cut(s) 355
PspXI VCTCGAGB 2 cut(s) 336, 392
PstNI CAGNNNCTG 1 cut(s) 202
PsuI RGATCY 2 cut(s) 70, 308
RsaI GTAC 1 cut(s) 501
RsaNI GTAC 1 cut(s) 500
SacII CCGCGG 1 cut(s) 407
SalI GTCGAC 1 cut(s) 485
SapI GCTCTTC 1 cut(s) 201
SaqAI TTAA 2 cut(s) 525, 529
SatI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 398, 407, 423
Sau3AI GATC 2 cut(s) 70, 308
Sau96I GGNCC 4 cut(s) 193, 247, 265, 355
SchI GAGTC 1 cut(s) 482
ScrFI CCNGG 7 cut(s) 35, 48, 168, 242, 285, 435, 472
SduI GDGCHC 3 cut(s) 48, 213, 350
SetI ASST 6 cut(s) 36, 131, 190, 221, 320, 399
Sfr274I CTCGAG 2 cut(s) 336, 392
Sfr303I CCGCGG 1 cut(s) 407
SgrBI CCGCGG 1 cut(s) 407
SinI GGWCC 3 cut(s) 193, 265, 355
SlaI CTCGAG 2 cut(s) 336, 392
SmlI CTYRAG 2 cut(s) 336, 392
SmoI CTYRAG 2 cut(s) 336, 392
Sse9I AATT 1 cut(s) 526
SspI AATATT 1 cut(s) 92
StyD4I CCNGG 7 cut(s) 33, 46, 166, 240, 283, 433, 470
TaaI ACNGT 2 cut(s) 484, 522
TaiI ACGT 1 cut(s) 221
TaqI TCGA 3 cut(s) 337, 393, 486
TaqII GACCGA 1 cut(s) 282
TasI AATT 1 cut(s) 526
TauI GCSGC 6 cut(s) 19, 59, 202, 248, 409, 425
TfiI GAWTC 1 cut(s) 513
Tru1I TTAA 2 cut(s) 525, 529
Tru9I TTAA 2 cut(s) 525, 529
TseI GCWGC 2 cut(s) 25, 397
TspGWI ACGGA 3 cut(s) 301, 456, 517
Van91I CCANNNNNTGG 1 cut(s) 202
VpaK11BI GGWCC 3 cut(s) 193, 265, 355
XhoI CTCGAG 2 cut(s) 336, 392
XmiI GTMKAC 1 cut(s) 486
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.