Rroxscaffold_34G00443310

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000034
OG0000104
Physical Location & Seq
Forward (+)
59899 .. 60697
799 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_34G00443310.1

Sequence Viewer

Length: 627 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCAGGGCGTGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGCCTGCCCACCCTGGAAACGGCTCGGCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTGCTGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGCTGGGCACGGGGGTCCCAGTCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCGCGTGCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACAGTCGACTCGGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

208

Amino Acids

21.97

Weight (kDa)

10.96

Isoelectric Point (pI)

65.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 202
AccBSI CCGCTC 2 cut(s) 56, 478
AccI GTMKAC 1 cut(s) 548
AccII CGCG 5 cut(s) 16, 223, 469, 485, 487
AccIII TCCGGA 1 cut(s) 258
AclWI GGATC 2 cut(s) 366, 379
AcoI YGGCCR 2 cut(s) 57, 492
AfaI GTAC 2 cut(s) 291, 563
AfiI CCNNNNNNNGG 4 cut(s) 121, 174, 202, 501
AgsI TTSAA 4 cut(s) 96, 110, 253, 542
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 2 cut(s) 33, 167
AluBI AGCT 1 cut(s) 460
AluI AGCT 1 cut(s) 460
Alw21I GWGCWC 1 cut(s) 213
Alw26I GTCTC 1 cut(s) 314
AlwI GGATC 2 cut(s) 366, 379
AlwNI CAGNNNCTG 1 cut(s) 202
Ama87I CYCGRG 4 cut(s) 46, 382, 455, 532
Aor13HI TCCGGA 1 cut(s) 258
AoxI GGCC 5 cut(s) 57, 112, 156, 245, 492
ApeKI GCWGC 3 cut(s) 25, 398, 460
AspLEI GCGC 3 cut(s) 16, 238, 487
AspS9I GGNCC 5 cut(s) 193, 246, 264, 419, 611
AsuC2I CCSGG 7 cut(s) 47, 48, 241, 284, 496, 533, 534
AsuHPI GGTGA 2 cut(s) 329, 458
AvaI CYCGRG 4 cut(s) 46, 382, 455, 532
AvaII GGWCC 4 cut(s) 193, 264, 419, 611
BaeGI GKGCMC 1 cut(s) 414
BamHI GGATCC 1 cut(s) 371
BanII GRGCYC 1 cut(s) 47
Bbv12I GWGCWC 1 cut(s) 213
BbvI GCAGC 3 cut(s) 12, 385, 447
BccI CCATC 1 cut(s) 602
BceAI ACGGC 3 cut(s) 44, 158, 191
BciT130I CCWGG 2 cut(s) 35, 169
BcnI CCSGG 7 cut(s) 47, 48, 241, 284, 496, 533, 534
BcoDI GTCTC 1 cut(s) 314
BglI GCCNNNNNGGC 1 cut(s) 244
BglII AGATCT 1 cut(s) 70
BisI GCNGC 9 cut(s) 17, 26, 57, 200, 245, 399, 461, 470, 492
BlsI GCNGC 9 cut(s) 18, 27, 58, 201, 246, 400, 462, 471, 493
Bme1390I CCNGG 9 cut(s) 35, 47, 48, 169, 241, 284, 496, 533, 534
Bme18I GGWCC 4 cut(s) 193, 264, 419, 611
BmeT110I CYCGRG 4 cut(s) 46, 382, 455, 532
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 5 cut(s) 193, 246, 264, 419, 611
BmiI GGNNCC 6 cut(s) 132, 194, 373, 420, 421, 613
BmrFI CCNGG 9 cut(s) 35, 47, 48, 169, 241, 284, 496, 533, 534
BmrI ACTGGG 2 cut(s) 417, 516
BmsI GCATC 1 cut(s) 311
BmuI ACTGGG 2 cut(s) 417, 516
BpuMI CCSGG 7 cut(s) 47, 48, 241, 284, 496, 533, 534
BsaI GGTCTC 1 cut(s) 314
BsaJI CCNNGG 9 cut(s) 34, 46, 167, 239, 313, 381, 467, 495, 532
BsaWI WCCGGW 1 cut(s) 258
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 177, 207
Bsc4I CCNNNNNNNGG 4 cut(s) 121, 174, 202, 501
Bse1I ACTGG 3 cut(s) 423, 511, 563
Bse3DI GCAATG 1 cut(s) 601
BseAI TCCGGA 1 cut(s) 258
BseBI CCWGG 2 cut(s) 35, 169
BseDI CCNNGG 9 cut(s) 34, 46, 167, 239, 313, 381, 467, 495, 532
BseGI GGATG 1 cut(s) 626
BseLI CCNNNNNNNGG 4 cut(s) 121, 174, 202, 501
BseMI GCAATG 1 cut(s) 601
BseNI ACTGG 3 cut(s) 423, 511, 563
BseSI GKGCMC 1 cut(s) 414
BseX3I CGGCCG 2 cut(s) 57, 492
BseXI GCAGC 3 cut(s) 12, 385, 447
BseYI CCCAGC 1 cut(s) 407
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 5 cut(s) 16, 223, 469, 485, 487
Bsh1285I CGRYCG 4 cut(s) 23, 60, 288, 495
BshFI GGCC 5 cut(s) 59, 114, 158, 247, 494
BsiEI CGRYCG 4 cut(s) 23, 60, 288, 495
BsiHKAI GWGCWC 1 cut(s) 213
BsiHKCI CYCGRG 4 cut(s) 46, 382, 455, 532
BsiSI CCGG 6 cut(s) 47, 241, 259, 284, 495, 533
BslFI GGGAC 3 cut(s) 405, 513, 597
BslI CCNNNNNNNGG 4 cut(s) 121, 174, 202, 501
BsmAI GTCTC 1 cut(s) 314
BsmFI GGGAC 3 cut(s) 405, 513, 597
BsnI GGCC 5 cut(s) 59, 114, 158, 247, 494
Bso31I GGTCTC 1 cut(s) 314
BsoBI CYCGRG 4 cut(s) 46, 382, 455, 532
Bsp1286I GDGCHC 3 cut(s) 47, 213, 414
Bsp13I TCCGGA 1 cut(s) 258
Bsp143I GATC 2 cut(s) 70, 371
BspANI GGCC 5 cut(s) 59, 114, 158, 247, 494
BspEI TCCGGA 1 cut(s) 258
BspFNI CGCG 5 cut(s) 16, 223, 469, 485, 487
BspLI GGNNCC 6 cut(s) 132, 194, 373, 420, 421, 613
BspPI GGATC 2 cut(s) 366, 379
BspQI GCTCTTC 1 cut(s) 201
BspTNI GGTCTC 1 cut(s) 314
BsrBI CCGCTC 2 cut(s) 56, 478
BsrDI GCAATG 1 cut(s) 601
BsrI ACTGG 3 cut(s) 423, 511, 563
BssECI CCNNGG 9 cut(s) 34, 46, 167, 239, 313, 381, 467, 495, 532
BssMI GATC 2 cut(s) 70, 371
BssT1I CCWWGG 1 cut(s) 313
Bst2UI CCWGG 2 cut(s) 35, 169
Bst4CI ACNGT 2 cut(s) 546, 584
Bst6I CTCTTC 2 cut(s) 112, 201
BstC8I GCNNGC 3 cut(s) 160, 327, 489
BstDSI CCRYGG 1 cut(s) 467
BstF5I GGATG 1 cut(s) 626
BstFNI CGCG 5 cut(s) 16, 223, 469, 485, 487
BstHHI GCGC 3 cut(s) 16, 238, 487
BstKTI GATC 2 cut(s) 73, 374
BstMAI GTCTC 1 cut(s) 314
BstMBI GATC 2 cut(s) 70, 371
BstMCI CGRYCG 4 cut(s) 23, 60, 288, 495
BstNI CCWGG 2 cut(s) 35, 169
BstSCI CCNGG 9 cut(s) 33, 45, 46, 167, 239, 282, 494, 531, 532
BstSLI GKGCMC 1 cut(s) 414
BstUI CGCG 5 cut(s) 16, 223, 469, 485, 487
BstV1I GCAGC 3 cut(s) 12, 385, 447
BstX2I RGATCY 2 cut(s) 70, 371
BstYI RGATCY 2 cut(s) 70, 371
BstZI CGGCCG 2 cut(s) 57, 492
BsuRI GGCC 5 cut(s) 59, 114, 158, 247, 494
BtgI CCRYGG 1 cut(s) 467
BtgZI GCGATG 1 cut(s) 621
BtrI CACGTC 1 cut(s) 219
BtsCI GGATG 1 cut(s) 626
Cac8I GCNNGC 3 cut(s) 160, 327, 489
CaiI CAGNNNCTG 1 cut(s) 202
CfoI GCGC 3 cut(s) 16, 238, 487
Cfr13I GGNCC 5 cut(s) 193, 246, 264, 419, 611
Cfr42I CCGCGG 1 cut(s) 470
Cfr9I CCCGGG 2 cut(s) 46, 532
Csp6I GTAC 2 cut(s) 290, 562
CviAII CATG 2 cut(s) 135, 154
CviQI GTAC 2 cut(s) 290, 562
DpnI GATC 2 cut(s) 72, 373
DpnII GATC 2 cut(s) 70, 371
EaeI YGGCCR 2 cut(s) 57, 492
EagI CGGCCG 2 cut(s) 57, 492
Eam1104I CTCTTC 2 cut(s) 112, 201
EarI CTCTTC 2 cut(s) 112, 201
EciI GGCGGA 2 cut(s) 66, 198
EclXI CGGCCG 2 cut(s) 57, 492
Eco130I CCWWGG 1 cut(s) 313
Eco24I GRGCYC 1 cut(s) 47
Eco31I GGTCTC 1 cut(s) 314
Eco47I GGWCC 4 cut(s) 193, 264, 419, 611
Eco52I CGGCCG 2 cut(s) 57, 492
Eco88I CYCGRG 4 cut(s) 46, 382, 455, 532
EcoO109I RGGNCCY 1 cut(s) 419
EcoRII CCWGG 2 cut(s) 33, 167
EcoT14I CCWWGG 1 cut(s) 313
EcoT38I GRGCYC 1 cut(s) 47
ErhI CCWWGG 1 cut(s) 313
FaeI CATG 2 cut(s) 138, 157
FaiI YATR 3 cut(s) 136, 155, 296
FaqI GGGAC 3 cut(s) 405, 513, 597
FatI CATG 2 cut(s) 134, 153
FauI CCCGC 1 cut(s) 471
FblI GTMKAC 1 cut(s) 548
Fnu4HI GCNGC 9 cut(s) 17, 26, 57, 200, 245, 399, 461, 470, 492
FriOI GRGCYC 1 cut(s) 47
Fsp4HI GCNGC 9 cut(s) 17, 26, 57, 200, 245, 399, 461, 470, 492
GlaI GCGC 3 cut(s) 15, 237, 486
GluI GCNGC 9 cut(s) 17, 26, 57, 200, 245, 399, 461, 470, 492
GsaI CCCAGC 1 cut(s) 411
HaeIII GGCC 5 cut(s) 59, 114, 158, 247, 494
HapII CCGG 6 cut(s) 47, 241, 259, 284, 495, 533
HhaI GCGC 3 cut(s) 16, 238, 487
Hin1II CATG 2 cut(s) 138, 157
Hin6I GCGC 3 cut(s) 14, 236, 485
HinP1I GCGC 3 cut(s) 14, 236, 485
HincII GTYRAC 1 cut(s) 549
HindII GTYRAC 1 cut(s) 549
HinfI GANTC 2 cut(s) 550, 575
HpaII CCGG 6 cut(s) 47, 241, 259, 284, 495, 533
HphI GGTGA 2 cut(s) 329, 458
Hpy166II GTNNAC 4 cut(s) 140, 320, 449, 549
Hpy188I TCNGA 3 cut(s) 429, 555, 580
Hpy188III TCNNGA 2 cut(s) 259, 384
Hpy8I GTNNAC 4 cut(s) 140, 320, 449, 549
Hpy99I CGWCG 3 cut(s) 65, 223, 439
HpyAV CCTTC 2 cut(s) 104, 528
HpyCH4III ACNGT 2 cut(s) 546, 584
HpyCH4IV ACGT 1 cut(s) 218
HpyCH4V TGCA 3 cut(s) 28, 68, 151
HpySE526I ACGT 1 cut(s) 218
Hsp92II CATG 2 cut(s) 138, 157
HspAI GCGC 3 cut(s) 14, 236, 485
KflI GGGWCCC 1 cut(s) 419
Kpn2I TCCGGA 1 cut(s) 258
KspI CCGCGG 1 cut(s) 470
Kzo9I GATC 2 cut(s) 70, 371
LguI GCTCTTC 1 cut(s) 201
LmnI GCTCC 2 cut(s) 53, 520
Lsp1109I GCAGC 3 cut(s) 12, 385, 447
LweI GCATC 1 cut(s) 311
MaeII ACGT 1 cut(s) 218
MaeIII GTNAC 1 cut(s) 376
MalI GATC 2 cut(s) 72, 373
MbiI CCGCTC 2 cut(s) 56, 478
MboI GATC 2 cut(s) 70, 371
MboII GAAGA 2 cut(s) 129, 218
MflI RGATCY 2 cut(s) 70, 371
MhlI GDGCHC 3 cut(s) 47, 213, 414
MluCI AATT 1 cut(s) 588
MlyI GAGTC 1 cut(s) 544
MmeI TCCRAC 1 cut(s) 603
MnlI CCTC 6 cut(s) 3, 113, 179, 255, 391, 396
MroI TCCGGA 1 cut(s) 258
MseI TTAA 3 cut(s) 587, 591, 625
MslI CAYNNNNRTG 1 cut(s) 606
MspA1I CMGCKG 2 cut(s) 199, 469
MspI CCGG 6 cut(s) 47, 241, 259, 284, 495, 533
MspR9I CCNGG 9 cut(s) 35, 47, 48, 169, 241, 284, 496, 533, 534
MvaI CCWGG 2 cut(s) 35, 169
MvnI CGCG 5 cut(s) 16, 223, 469, 485, 487
NciI CCSGG 7 cut(s) 47, 48, 241, 284, 496, 533, 534
NdeII GATC 2 cut(s) 70, 371
NlaIII CATG 2 cut(s) 138, 157
NlaIV GGNNCC 6 cut(s) 132, 194, 373, 420, 421, 613
NmeAIII GCCGAG 1 cut(s) 159
PacI TTAATTAA 1 cut(s) 591
PaeR7I CTCGAG 1 cut(s) 455
PciSI GCTCTTC 1 cut(s) 201
PfeI GAWTC 1 cut(s) 575
PflMI CCANNNNNTGG 1 cut(s) 202
PkrI GCNGC 9 cut(s) 18, 27, 58, 201, 246, 400, 462, 471, 493
PleI GAGTC 1 cut(s) 544
PpsI GAGTC 1 cut(s) 544
PpuMI RGGWCCY 1 cut(s) 419
Psp5II RGGWCCY 1 cut(s) 419
Psp6I CCWGG 2 cut(s) 33, 167
PspFI CCCAGC 1 cut(s) 407
PspGI CCWGG 2 cut(s) 33, 167
PspN4I GGNNCC 6 cut(s) 132, 194, 373, 420, 421, 613
PspPI GGNCC 5 cut(s) 193, 246, 264, 419, 611
PspPPI RGGWCCY 1 cut(s) 419
PspXI VCTCGAGB 1 cut(s) 455
PstNI CAGNNNCTG 1 cut(s) 202
PsuI RGATCY 2 cut(s) 70, 371
RsaI GTAC 2 cut(s) 291, 563
RsaNI GTAC 2 cut(s) 290, 562
RseI CAYNNNNRTG 1 cut(s) 606
SacII CCGCGG 1 cut(s) 470
SalI GTCGAC 1 cut(s) 547
SapI GCTCTTC 1 cut(s) 201
SaqAI TTAA 3 cut(s) 587, 591, 625
SatI GCNGC 9 cut(s) 17, 26, 57, 200, 245, 399, 461, 470, 492
Sau3AI GATC 2 cut(s) 70, 371
Sau96I GGNCC 5 cut(s) 193, 246, 264, 419, 611
SchI GAGTC 1 cut(s) 544
ScrFI CCNGG 9 cut(s) 35, 47, 48, 169, 241, 284, 496, 533, 534
SduI GDGCHC 3 cut(s) 47, 213, 414
SetI ASST 7 cut(s) 132, 190, 221, 310, 319, 383, 462
SfaNI GCATC 1 cut(s) 311
Sfr274I CTCGAG 1 cut(s) 455
Sfr303I CCGCGG 1 cut(s) 470
SgrBI CCGCGG 1 cut(s) 470
SinI GGWCC 4 cut(s) 193, 264, 419, 611
SlaI CTCGAG 1 cut(s) 455
SmaI CCCGGG 2 cut(s) 48, 534
SmiMI CAYNNNNRTG 1 cut(s) 606
SmlI CTYRAG 1 cut(s) 455
SmoI CTYRAG 1 cut(s) 455
SrfI GCCCGGGC 1 cut(s) 48
Sse9I AATT 1 cut(s) 588
SspI AATATT 1 cut(s) 92
StyD4I CCNGG 9 cut(s) 33, 45, 46, 167, 239, 282, 494, 531, 532
StyI CCWWGG 1 cut(s) 313
TaaI ACNGT 2 cut(s) 546, 584
TaiI ACGT 1 cut(s) 221
TaqI TCGA 2 cut(s) 456, 548
TaqII GACCGA 1 cut(s) 281
TasI AATT 1 cut(s) 588
TauI GCSGC 6 cut(s) 19, 59, 202, 247, 472, 494
TfiI GAWTC 1 cut(s) 575
Tru1I TTAA 3 cut(s) 587, 591, 625
Tru9I TTAA 3 cut(s) 587, 591, 625
TseI GCWGC 3 cut(s) 25, 398, 460
TspGWI ACGGA 3 cut(s) 364, 517, 579
TspMI CCCGGG 2 cut(s) 46, 532
Van91I CCANNNNNTGG 1 cut(s) 202
VpaK11BI GGWCC 4 cut(s) 193, 264, 419, 611
XhoI CTCGAG 1 cut(s) 455
XmaI CCCGGG 2 cut(s) 46, 532
XmiI GTMKAC 1 cut(s) 548
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.