Rroxscaffold_69G00446790

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000069
OG0000104
Physical Location & Seq
Forward (+)
58150 .. 58819
670 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_69G00446790.1

Sequence Viewer

Length: 654 bp
ATGGCGCTTAAGCGCGTGACCTATACCGGCCGTCGGGGCAAGTGCCGGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACACAGGGCGTGAGCCGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGAGGCGGGTAACCCGTCGATAGCGCGTCTCGCGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCGAACCGGGACGTGGTGGTTGACGGCAACGTTAGGGGAGTCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTACGTTTAACGACTGCCCACCCACGGAAACGGCTCGGCGGAGTAGGGTCCGGCGGCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGGTCGTACTCATAACCGCATCGGGTCTCCAAAGGTGAACAGCCTGCGGTCAATGGAACAATGTAGGGCAAGGGAAGTCGGCAAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGGCGGGCACGGGGGTCCCGGTCCCGAACCCGTCGGCTGTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

217

Amino Acids

23.22

Weight (kDa)

11.52

Isoelectric Point (pI)

45.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 321
AccBSI CCGCTC 1 cut(s) 109
AccII CGCG 6 cut(s) 15, 70, 232, 239, 241, 425
AccIII TCCGGA 1 cut(s) 460
AclI AACGTT 1 cut(s) 300
AclWI GGATC 2 cut(s) 570, 583
AcoI YGGCCR 2 cut(s) 28, 110
AcsI RAATTY 1 cut(s) 267
AcyI GRCGYC 1 cut(s) 318
AfaI GTAC 1 cut(s) 493
AfiI CCNNNNNNNGG 3 cut(s) 33, 283, 372
AflII CTTAAG 1 cut(s) 8
AgsI TTSAA 3 cut(s) 149, 163, 455
AjiI CACGTC 2 cut(s) 283, 421
Alw21I GWGCWC 1 cut(s) 415
Alw26I GTCTC 3 cut(s) 239, 309, 516
AlwI GGATC 2 cut(s) 570, 583
Ama87I CYCGRG 2 cut(s) 332, 586
Aor13HI TCCGGA 1 cut(s) 460
AoxI GGCC 6 cut(s) 28, 48, 110, 165, 328, 447
ApaI GGGCCC 1 cut(s) 52
ApeKI GCWGC 2 cut(s) 79, 602
ApoI RAATTY 1 cut(s) 267
AspLEI GCGC 6 cut(s) 7, 15, 70, 232, 241, 441
AspS9I GGNCC 8 cut(s) 48, 49, 328, 396, 448, 466, 623, 629
AsuC2I CCSGG 5 cut(s) 47, 278, 443, 486, 627
AsuHPI GGTGA 1 cut(s) 532
AsuII TTCGAA 1 cut(s) 248
AvaI CYCGRG 2 cut(s) 332, 586
AvaII GGWCC 4 cut(s) 396, 466, 623, 629
BaeGI GKGCMC 2 cut(s) 52, 618
BamHI GGATCC 1 cut(s) 575
BanII GRGCYC 1 cut(s) 52
Bbv12I GWGCWC 1 cut(s) 415
BbvI GCAGC 2 cut(s) 66, 589
BceAI ACGGC 5 cut(s) 15, 97, 209, 310, 395
BcnI CCSGG 5 cut(s) 47, 278, 443, 486, 627
BcoDI GTCTC 3 cut(s) 239, 309, 516
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 8
BglI GCCNNNNNGGC 1 cut(s) 36
BglII AGATCT 1 cut(s) 123
BisI GCNGC 6 cut(s) 71, 80, 110, 403, 447, 603
BlsI GCNGC 6 cut(s) 72, 81, 111, 404, 448, 604
Bme1390I CCNGG 5 cut(s) 47, 278, 443, 486, 627
Bme18I GGWCC 4 cut(s) 396, 466, 623, 629
BmeT110I CYCGRG 2 cut(s) 332, 586
BmgBI CACGTC 2 cut(s) 283, 421
BmgT120I GGNCC 8 cut(s) 48, 49, 328, 396, 448, 466, 623, 629
BmiI GGNNCC 9 cut(s) 50, 51, 183, 329, 397, 577, 624, 625, 631
BmrFI CCNGG 5 cut(s) 47, 278, 443, 486, 627
BmsI GCATC 1 cut(s) 513
Bpu14I TTCGAA 1 cut(s) 248
BpuMI CCSGG 5 cut(s) 47, 278, 443, 486, 627
BsaHI GRCGYC 1 cut(s) 318
BsaI GGTCTC 1 cut(s) 516
BsaJI CCNNGG 3 cut(s) 331, 371, 585
BsaWI WCCGGW 2 cut(s) 433, 460
BsaXI ACNNNNNCTCC 2 cut(s) 98, 128
Bsc4I CCNNNNNNNGG 3 cut(s) 33, 283, 372
Bse118I RCCGGY 2 cut(s) 26, 100
BseAI TCCGGA 1 cut(s) 460
BseDI CCNNGG 3 cut(s) 331, 371, 585
BseLI CCNNNNNNNGG 3 cut(s) 33, 283, 372
BseSI GKGCMC 2 cut(s) 52, 618
BseX3I CGGCCG 2 cut(s) 28, 110
BseXI GCAGC 2 cut(s) 66, 589
BsgI GTGCAG 1 cut(s) 140
Bsh1236I CGCG 6 cut(s) 15, 70, 232, 239, 241, 425
Bsh1285I CGRYCG 3 cut(s) 31, 77, 113
BshFI GGCC 6 cut(s) 30, 50, 112, 167, 330, 449
BsiEI CGRYCG 3 cut(s) 31, 77, 113
BsiHKAI GWGCWC 1 cut(s) 415
BsiHKCI CYCGRG 2 cut(s) 332, 586
BslFI GGGAC 3 cut(s) 293, 609, 615
BslI CCNNNNNNNGG 3 cut(s) 33, 283, 372
BsmAI GTCTC 3 cut(s) 239, 309, 516
BsmBI CGTCTC 2 cut(s) 239, 309
BsmFI GGGAC 3 cut(s) 293, 609, 615
BsnI GGCC 6 cut(s) 30, 50, 112, 167, 330, 449
Bso31I GGTCTC 1 cut(s) 516
BsoBI CYCGRG 2 cut(s) 332, 586
Bsp119I TTCGAA 1 cut(s) 248
Bsp120I GGGCCC 1 cut(s) 48
Bsp1286I GDGCHC 3 cut(s) 52, 415, 618
Bsp13I TCCGGA 1 cut(s) 460
Bsp143I GATC 2 cut(s) 123, 575
BspANI GGCC 6 cut(s) 30, 50, 112, 167, 330, 449
BspEI TCCGGA 1 cut(s) 460
BspFNI CGCG 6 cut(s) 15, 70, 232, 239, 241, 425
BspLI GGNNCC 9 cut(s) 50, 51, 183, 329, 397, 577, 624, 625, 631
BspPI GGATC 2 cut(s) 570, 583
BspQI GCTCTTC 1 cut(s) 403
BspT104I TTCGAA 1 cut(s) 248
BspTI CTTAAG 1 cut(s) 8
BspTNI GGTCTC 1 cut(s) 516
BsrBI CCGCTC 1 cut(s) 109
BsrFI RCCGGY 2 cut(s) 26, 100
BssAI RCCGGY 2 cut(s) 26, 100
BssECI CCNNGG 3 cut(s) 331, 371, 585
BssMI GATC 2 cut(s) 123, 575
BssNI GRCGYC 1 cut(s) 318
Bst6I CTCTTC 3 cut(s) 165, 332, 403
BstACI GRCGYC 1 cut(s) 318
BstAFI CTTAAG 1 cut(s) 8
BstBI TTCGAA 1 cut(s) 248
BstC8I GCNNGC 3 cut(s) 102, 530, 614
BstDSI CCRYGG 1 cut(s) 371
BstEII GGTNACC 1 cut(s) 215
BstFNI CGCG 6 cut(s) 15, 70, 232, 239, 241, 425
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 6 cut(s) 7, 15, 70, 232, 241, 441
BstKTI GATC 2 cut(s) 126, 578
BstMAI GTCTC 3 cut(s) 239, 309, 516
BstMBI GATC 2 cut(s) 123, 575
BstMCI CGRYCG 3 cut(s) 31, 77, 113
BstMWI GCNNNNNNNGC 8 cut(s) 36, 76, 79, 106, 118, 236, 238, 481
BstPI GGTNACC 1 cut(s) 215
BstSCI CCNGG 5 cut(s) 45, 276, 441, 484, 625
BstSLI GKGCMC 2 cut(s) 52, 618
BstUI CGCG 6 cut(s) 15, 70, 232, 239, 241, 425
BstV1I GCAGC 2 cut(s) 66, 589
BstX2I RGATCY 2 cut(s) 123, 575
BstYI RGATCY 2 cut(s) 123, 575
BstZI CGGCCG 2 cut(s) 28, 110
BsuRI GGCC 6 cut(s) 30, 50, 112, 167, 330, 449
BtgI CCRYGG 1 cut(s) 371
BtrI CACGTC 2 cut(s) 283, 421
Cac8I GCNNGC 3 cut(s) 102, 530, 614
CfoI GCGC 6 cut(s) 7, 15, 70, 232, 241, 441
Cfr10I RCCGGY 2 cut(s) 26, 100
Cfr13I GGNCC 8 cut(s) 48, 49, 328, 396, 448, 466, 623, 629
CseI GACGC 1 cut(s) 221
Csp6I GTAC 1 cut(s) 492
CviAII CATG 2 cut(s) 186, 205
CviQI GTAC 1 cut(s) 492
DpnI GATC 2 cut(s) 125, 577
DpnII GATC 2 cut(s) 123, 575
EaeI YGGCCR 2 cut(s) 28, 110
EagI CGGCCG 2 cut(s) 28, 110
Eam1104I CTCTTC 3 cut(s) 165, 332, 403
EarI CTCTTC 3 cut(s) 165, 332, 403
EciI GGCGGA 3 cut(s) 119, 402, 420
EclXI CGGCCG 2 cut(s) 28, 110
Eco24I GRGCYC 1 cut(s) 52
Eco31I GGTCTC 1 cut(s) 516
Eco47I GGWCC 4 cut(s) 396, 466, 623, 629
Eco52I CGGCCG 2 cut(s) 28, 110
Eco88I CYCGRG 2 cut(s) 332, 586
Eco91I GGTNACC 1 cut(s) 215
EcoO109I RGGNCCY 3 cut(s) 49, 328, 623
EcoO65I GGTNACC 1 cut(s) 215
EcoT38I GRGCYC 1 cut(s) 52
Esp3I CGTCTC 2 cut(s) 239, 309
FaeI CATG 2 cut(s) 189, 208
FaiI YATR 4 cut(s) 24, 187, 206, 498
FaqI GGGAC 3 cut(s) 293, 609, 615
FatI CATG 2 cut(s) 185, 204
FauI CCCGC 3 cut(s) 205, 317, 605
Fnu4HI GCNGC 6 cut(s) 71, 80, 110, 403, 447, 603
FriOI GRGCYC 1 cut(s) 52
Fsp4HI GCNGC 6 cut(s) 71, 80, 110, 403, 447, 603
GlaI GCGC 6 cut(s) 6, 14, 69, 231, 240, 440
GluI GCNGC 6 cut(s) 71, 80, 110, 403, 447, 603
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 6 cut(s) 30, 50, 112, 167, 330, 449
HgaI GACGC 1 cut(s) 221
HhaI GCGC 6 cut(s) 7, 15, 70, 232, 241, 441
Hin1I GRCGYC 1 cut(s) 318
Hin1II CATG 2 cut(s) 189, 208
Hin6I GCGC 6 cut(s) 5, 13, 68, 230, 239, 439
HinP1I GCGC 6 cut(s) 5, 13, 68, 230, 239, 439
HincII GTYRAC 1 cut(s) 292
HindII GTYRAC 1 cut(s) 292
HinfI GANTC 2 cut(s) 256, 309
HphI GGTGA 1 cut(s) 532
Hpy166II GTNNAC 3 cut(s) 191, 292, 523
Hpy188I TCNGA 2 cut(s) 273, 314
Hpy188III TCNNGA 4 cut(s) 334, 461, 588, 632
Hpy8I GTNNAC 3 cut(s) 191, 292, 523
Hpy99I CGWCG 6 cut(s) 36, 118, 226, 323, 425, 644
HpyAV CCTTC 1 cut(s) 157
HpyCH4IV ACGT 5 cut(s) 282, 300, 318, 352, 420
HpyCH4V TGCA 3 cut(s) 82, 121, 202
HpyF10VI GCNNNNNNNGC 8 cut(s) 36, 76, 79, 106, 118, 236, 238, 481
HpySE526I ACGT 5 cut(s) 282, 300, 318, 352, 420
Hsp92I GRCGYC 1 cut(s) 318
Hsp92II CATG 2 cut(s) 189, 208
HspAI GCGC 6 cut(s) 5, 13, 68, 230, 239, 439
KflI GGGWCCC 1 cut(s) 623
Kpn2I TCCGGA 1 cut(s) 460
KroI GCCGGC 1 cut(s) 100
KroNI GCCGGC 1 cut(s) 102
Kzo9I GATC 2 cut(s) 123, 575
LguI GCTCTTC 1 cut(s) 403
LmnI GCTCC 1 cut(s) 106
Lsp1109I GCAGC 2 cut(s) 66, 589
LweI GCATC 1 cut(s) 513
MaeII ACGT 5 cut(s) 282, 300, 318, 352, 420
MaeIII GTNAC 3 cut(s) 16, 215, 580
MalI GATC 2 cut(s) 125, 577
MbiI CCGCTC 1 cut(s) 109
MboI GATC 2 cut(s) 123, 575
MboII GAAGA 3 cut(s) 182, 349, 420
MflI RGATCY 2 cut(s) 123, 575
MhlI GDGCHC 3 cut(s) 52, 415, 618
MluCI AATT 1 cut(s) 267
MlyI GAGTC 1 cut(s) 318
MmeI TCCRAC 1 cut(s) 292
MnlI CCTC 7 cut(s) 57, 166, 202, 341, 457, 595, 600
MroI TCCGGA 1 cut(s) 460
MroNI GCCGGC 1 cut(s) 100
MseI TTAA 3 cut(s) 9, 264, 356
MspCI CTTAAG 1 cut(s) 8
MspR9I CCNGG 5 cut(s) 47, 278, 443, 486, 627
MvnI CGCG 6 cut(s) 15, 70, 232, 239, 241, 425
MwoI GCNNNNNNNGC 8 cut(s) 36, 76, 79, 106, 118, 236, 238, 481
NaeI GCCGGC 1 cut(s) 102
NciI CCSGG 5 cut(s) 47, 278, 443, 486, 627
NdeII GATC 2 cut(s) 123, 575
NgoMIV GCCGGC 1 cut(s) 100
NlaIII CATG 2 cut(s) 189, 208
NlaIV GGNNCC 9 cut(s) 50, 51, 183, 329, 397, 577, 624, 625, 631
NmeAIII GCCGAG 1 cut(s) 363
NmuCI GTSAC 1 cut(s) 16
NspV TTCGAA 1 cut(s) 248
PciSI GCTCTTC 1 cut(s) 403
PdiI GCCGGC 1 cut(s) 102
PfeI GAWTC 1 cut(s) 256
PkrI GCNGC 6 cut(s) 72, 81, 111, 404, 448, 604
PleI GAGTC 1 cut(s) 317
PpsI GAGTC 1 cut(s) 317
PpuMI RGGWCCY 1 cut(s) 623
Psp1406I AACGTT 1 cut(s) 300
Psp5II RGGWCCY 1 cut(s) 623
PspEI GGTNACC 1 cut(s) 215
PspN4I GGNNCC 9 cut(s) 50, 51, 183, 329, 397, 577, 624, 625, 631
PspOMI GGGCCC 1 cut(s) 48
PspPI GGNCC 8 cut(s) 48, 49, 328, 396, 448, 466, 623, 629
PspPPI RGGWCCY 1 cut(s) 623
PsuI RGATCY 2 cut(s) 123, 575
RsaI GTAC 1 cut(s) 493
RsaNI GTAC 1 cut(s) 492
SapI GCTCTTC 1 cut(s) 403
SaqAI TTAA 3 cut(s) 9, 264, 356
SatI GCNGC 6 cut(s) 71, 80, 110, 403, 447, 603
Sau3AI GATC 2 cut(s) 123, 575
Sau96I GGNCC 8 cut(s) 48, 49, 328, 396, 448, 466, 623, 629
SchI GAGTC 1 cut(s) 318
ScrFI CCNGG 5 cut(s) 47, 278, 443, 486, 627
SduI GDGCHC 3 cut(s) 52, 415, 618
SetI ASST 9 cut(s) 23, 183, 285, 303, 321, 355, 423, 522, 587
SfaNI GCATC 1 cut(s) 513
SfuI TTCGAA 1 cut(s) 248
SinI GGWCC 4 cut(s) 396, 466, 623, 629
SmlI CTYRAG 1 cut(s) 8
SmoI CTYRAG 1 cut(s) 8
Sse9I AATT 1 cut(s) 267
SspI AATATT 1 cut(s) 145
StyD4I CCNGG 5 cut(s) 45, 276, 441, 484, 625
TaiI ACGT 5 cut(s) 285, 303, 321, 355, 423
TaqI TCGA 2 cut(s) 224, 248
TaqII GACCGA 1 cut(s) 483
TasI AATT 1 cut(s) 267
TauI GCSGC 4 cut(s) 73, 112, 405, 449
TfiI GAWTC 1 cut(s) 256
Tru1I TTAA 3 cut(s) 9, 264, 356
Tru9I TTAA 3 cut(s) 9, 264, 356
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 2 cut(s) 79, 602
Tsp45I GTSAC 1 cut(s) 16
TspGWI ACGGA 2 cut(s) 388, 568
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 4 cut(s) 396, 466, 623, 629
XapI RAATTY 1 cut(s) 267
ZraI GACGTC 1 cut(s) 319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.