Rroxscaffold_30G00449490

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000030
OG0000104
Physical Location & Seq
Forward (+)
11660 .. 12424
765 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_30G00449490.1

Sequence Viewer

Length: 585 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCCGGGGCGTGAGCCCGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGGAGTCCGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCCGGAAACGGCTCAGCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCTGGGCACGGGGGTCCCGGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGCTTTCCCGGGCGTTCAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

194

Amino Acids

20.69

Weight (kDa)

11.15

Isoelectric Point (pI)

50.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 171
AccB7I CCANNNNNTGG 1 cut(s) 256
AccBSI CCGCTC 2 cut(s) 56, 469
AccI GTMKAC 1 cut(s) 540
AccII CGCG 4 cut(s) 16, 277, 460, 479
AccIII TCCGGA 1 cut(s) 313
AclWI GGATC 2 cut(s) 357, 370
AcoI YGGCCR 2 cut(s) 57, 485
AcyI GRCGYC 1 cut(s) 168
AfaI GTAC 1 cut(s) 555
AfiI CCNNNNNNNGG 7 cut(s) 121, 228, 256, 344, 483, 490, 494
AgsI TTSAA 4 cut(s) 96, 110, 308, 534
AjiI CACGTC 1 cut(s) 273
AluBI AGCT 1 cut(s) 451
AluI AGCT 1 cut(s) 451
Alw21I GWGCWC 1 cut(s) 267
Alw26I GTCTC 1 cut(s) 159
AlwI GGATC 2 cut(s) 357, 370
AlwNI CAGNNNCTG 1 cut(s) 256
Ama87I CYCGRG 6 cut(s) 34, 182, 373, 390, 446, 524
Aor13HI TCCGGA 1 cut(s) 313
AoxI GGCC 5 cut(s) 57, 112, 178, 300, 485
ApeKI GCWGC 2 cut(s) 25, 451
AspLEI GCGC 2 cut(s) 16, 293
AspS9I GGNCC 6 cut(s) 178, 247, 301, 319, 409, 415
AsuHPI GGTGA 1 cut(s) 449
AvaI CYCGRG 6 cut(s) 34, 182, 373, 390, 446, 524
AvaII GGWCC 4 cut(s) 247, 319, 409, 415
BaeGI GKGCMC 1 cut(s) 404
BamHI GGATCC 1 cut(s) 362
BanII GRGCYC 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 267
BbvI GCAGC 2 cut(s) 12, 438
BceAI ACGGC 3 cut(s) 44, 157, 245
BcoDI GTCTC 1 cut(s) 159
BglI GCCNNNNNGGC 1 cut(s) 299
BglII AGATCT 1 cut(s) 70
BisI GCNGC 8 cut(s) 17, 26, 57, 254, 300, 452, 461, 477
BlpI GCTNAGC 1 cut(s) 233
BlsI GCNGC 8 cut(s) 18, 27, 58, 255, 301, 453, 462, 478
Bme18I GGWCC 4 cut(s) 247, 319, 409, 415
BmeT110I CYCGRG 6 cut(s) 34, 182, 373, 390, 446, 524
BmgBI CACGTC 1 cut(s) 273
BmgT120I GGNCC 6 cut(s) 178, 247, 301, 319, 409, 415
BmiI GGNNCC 7 cut(s) 131, 179, 248, 364, 410, 411, 417
BmrI ACTGGG 1 cut(s) 509
BmuI ACTGGG 1 cut(s) 509
Bpu1102I GCTNAGC 1 cut(s) 233
BsaHI GRCGYC 1 cut(s) 168
BsaJI CCNNGG 9 cut(s) 34, 35, 181, 221, 294, 372, 458, 488, 524
BsaWI WCCGGW 2 cut(s) 285, 313
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 231, 261
Bsc4I CCNNNNNNNGG 7 cut(s) 121, 228, 256, 344, 483, 490, 494
Bse118I RCCGGY 1 cut(s) 483
Bse1I ACTGG 2 cut(s) 504, 555
BseAI TCCGGA 1 cut(s) 313
BseDI CCNNGG 9 cut(s) 34, 35, 181, 221, 294, 372, 458, 488, 524
BseLI CCNNNNNNNGG 7 cut(s) 121, 228, 256, 344, 483, 490, 494
BseMII CTCAG 2 cut(s) 247, 558
BseNI ACTGG 2 cut(s) 504, 555
BseSI GKGCMC 1 cut(s) 404
BseX3I CGGCCG 2 cut(s) 57, 485
BseXI GCAGC 2 cut(s) 12, 438
BseYI CCCAGC 1 cut(s) 397
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 4 cut(s) 16, 277, 460, 479
Bsh1285I CGRYCG 3 cut(s) 23, 60, 488
BshFI GGCC 5 cut(s) 59, 114, 180, 302, 487
BsiEI CGRYCG 3 cut(s) 23, 60, 488
BsiHKAI GWGCWC 1 cut(s) 267
BsiHKCI CYCGRG 6 cut(s) 34, 182, 373, 390, 446, 524
BslFI GGGAC 3 cut(s) 395, 401, 506
BslI CCNNNNNNNGG 7 cut(s) 121, 228, 256, 344, 483, 490, 494
BsmAI GTCTC 1 cut(s) 159
BsmBI CGTCTC 1 cut(s) 159
BsmFI GGGAC 3 cut(s) 395, 401, 506
BsnI GGCC 5 cut(s) 59, 114, 180, 302, 487
BsoBI CYCGRG 6 cut(s) 34, 182, 373, 390, 446, 524
Bsp1286I GDGCHC 3 cut(s) 48, 267, 404
Bsp13I TCCGGA 1 cut(s) 313
Bsp143I GATC 2 cut(s) 70, 362
Bsp1720I GCTNAGC 1 cut(s) 233
BspANI GGCC 5 cut(s) 59, 114, 180, 302, 487
BspCNI CTCAG 2 cut(s) 246, 557
BspEI TCCGGA 1 cut(s) 313
BspFNI CGCG 4 cut(s) 16, 277, 460, 479
BspLI GGNNCC 7 cut(s) 131, 179, 248, 364, 410, 411, 417
BspPI GGATC 2 cut(s) 357, 370
BspQI GCTCTTC 1 cut(s) 255
BsrBI CCGCTC 2 cut(s) 56, 469
BsrFI RCCGGY 1 cut(s) 483
BsrI ACTGG 2 cut(s) 504, 555
BssAI RCCGGY 1 cut(s) 483
BssECI CCNNGG 9 cut(s) 34, 35, 181, 221, 294, 372, 458, 488, 524
BssMI GATC 2 cut(s) 70, 362
BssNI GRCGYC 1 cut(s) 168
Bst4CI ACNGT 2 cut(s) 538, 576
Bst6I CTCTTC 3 cut(s) 112, 182, 255
BstACI GRCGYC 1 cut(s) 168
BstC8I GCNNGC 3 cut(s) 214, 481, 485
BstDEI CTNAG 2 cut(s) 233, 544
BstDSI CCRYGG 1 cut(s) 458
BstFNI CGCG 4 cut(s) 16, 277, 460, 479
BstHHI GCGC 2 cut(s) 16, 293
BstKTI GATC 2 cut(s) 73, 365
BstMAI GTCTC 1 cut(s) 159
BstMBI GATC 2 cut(s) 70, 362
BstMCI CGRYCG 3 cut(s) 23, 60, 488
BstSLI GKGCMC 1 cut(s) 404
BstUI CGCG 4 cut(s) 16, 277, 460, 479
BstV1I GCAGC 2 cut(s) 12, 438
BstX2I RGATCY 2 cut(s) 70, 362
BstYI RGATCY 2 cut(s) 70, 362
BstZI CGGCCG 2 cut(s) 57, 485
BsuRI GGCC 5 cut(s) 59, 114, 180, 302, 487
BtgI CCRYGG 1 cut(s) 458
BtrI CACGTC 1 cut(s) 273
Cac8I GCNNGC 3 cut(s) 214, 481, 485
CaiI CAGNNNCTG 1 cut(s) 256
CfoI GCGC 2 cut(s) 16, 293
Cfr10I RCCGGY 1 cut(s) 483
Cfr13I GGNCC 6 cut(s) 178, 247, 301, 319, 409, 415
Cfr42I CCGCGG 1 cut(s) 461
Cfr9I CCCGGG 2 cut(s) 34, 524
Csp6I GTAC 1 cut(s) 554
CviAII CATG 2 cut(s) 134, 153
CviQI GTAC 1 cut(s) 554
DdeI CTNAG 2 cut(s) 233, 544
DpnI GATC 2 cut(s) 72, 364
DpnII GATC 2 cut(s) 70, 362
EaeI YGGCCR 2 cut(s) 57, 485
EagI CGGCCG 2 cut(s) 57, 485
Eam1104I CTCTTC 3 cut(s) 112, 182, 255
EarI CTCTTC 3 cut(s) 112, 182, 255
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 2 cut(s) 57, 485
Eco24I GRGCYC 1 cut(s) 48
Eco47I GGWCC 4 cut(s) 247, 319, 409, 415
Eco52I CGGCCG 2 cut(s) 57, 485
Eco88I CYCGRG 6 cut(s) 34, 182, 373, 390, 446, 524
EcoO109I RGGNCCY 2 cut(s) 178, 409
EcoT38I GRGCYC 1 cut(s) 48
Esp3I CGTCTC 1 cut(s) 159
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 2 cut(s) 135, 154
FaqI GGGAC 3 cut(s) 395, 401, 506
FatI CATG 2 cut(s) 133, 152
FauI CCCGC 2 cut(s) 167, 462
FblI GTMKAC 1 cut(s) 540
Fnu4HI GCNGC 8 cut(s) 17, 26, 57, 254, 300, 452, 461, 477
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 8 cut(s) 17, 26, 57, 254, 300, 452, 461, 477
GlaI GCGC 2 cut(s) 15, 292
GluI GCNGC 8 cut(s) 17, 26, 57, 254, 300, 452, 461, 477
GsaI CCCAGC 1 cut(s) 401
HaeIII GGCC 5 cut(s) 59, 114, 180, 302, 487
HhaI GCGC 2 cut(s) 16, 293
Hin1I GRCGYC 1 cut(s) 168
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 2 cut(s) 14, 291
HinP1I GCGC 2 cut(s) 14, 291
HincII GTYRAC 1 cut(s) 541
HindII GTYRAC 1 cut(s) 541
HinfI GANTC 3 cut(s) 159, 542, 567
HphI GGTGA 1 cut(s) 449
Hpy166II GTNNAC 3 cut(s) 139, 440, 541
Hpy188I TCNGA 3 cut(s) 164, 547, 572
Hpy188III TCNNGA 4 cut(s) 184, 314, 375, 418
Hpy8I GTNNAC 3 cut(s) 139, 440, 541
Hpy99I CGWCG 4 cut(s) 65, 173, 277, 430
HpyAV CCTTC 2 cut(s) 104, 521
HpyCH4III ACNGT 2 cut(s) 538, 576
HpyCH4IV ACGT 2 cut(s) 168, 272
HpyCH4V TGCA 3 cut(s) 28, 68, 150
HpyF3I CTNAG 2 cut(s) 233, 544
HpySE526I ACGT 2 cut(s) 168, 272
Hsp92I GRCGYC 1 cut(s) 168
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 2 cut(s) 14, 291
KflI GGGWCCC 1 cut(s) 409
Kpn2I TCCGGA 1 cut(s) 313
KroI GCCGGC 1 cut(s) 483
KroNI GCCGGC 1 cut(s) 485
KspI CCGCGG 1 cut(s) 461
Kzo9I GATC 2 cut(s) 70, 362
LguI GCTCTTC 1 cut(s) 255
LmnI GCTCC 2 cut(s) 53, 513
Lsp1109I GCAGC 2 cut(s) 12, 438
MaeII ACGT 2 cut(s) 168, 272
MaeIII GTNAC 1 cut(s) 367
MalI GATC 2 cut(s) 72, 364
MbiI CCGCTC 2 cut(s) 56, 469
MboI GATC 2 cut(s) 70, 362
MboII GAAGA 3 cut(s) 129, 199, 272
MflI RGATCY 2 cut(s) 70, 362
MhlI GDGCHC 3 cut(s) 48, 267, 404
MluCI AATT 1 cut(s) 580
MlyI GAGTC 2 cut(s) 168, 536
MnlI CCTC 7 cut(s) 3, 113, 191, 233, 310, 382, 386
MroI TCCGGA 1 cut(s) 313
MroNI GCCGGC 1 cut(s) 483
MseI TTAA 3 cut(s) 206, 579, 583
MspA1I CMGCKG 3 cut(s) 237, 253, 460
MvnI CGCG 4 cut(s) 16, 277, 460, 479
NaeI GCCGGC 1 cut(s) 485
NdeII GATC 2 cut(s) 70, 362
NgoMIV GCCGGC 1 cut(s) 483
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 7 cut(s) 131, 179, 248, 364, 410, 411, 417
PacI TTAATTAA 1 cut(s) 583
PaeR7I CTCGAG 2 cut(s) 390, 446
PciSI GCTCTTC 1 cut(s) 255
PdiI GCCGGC 1 cut(s) 485
PfeI GAWTC 1 cut(s) 567
PflMI CCANNNNNTGG 1 cut(s) 256
PkrI GCNGC 8 cut(s) 18, 27, 58, 255, 301, 453, 462, 478
PleI GAGTC 2 cut(s) 167, 536
PpsI GAGTC 2 cut(s) 167, 536
PpuMI RGGWCCY 1 cut(s) 409
Psp5II RGGWCCY 1 cut(s) 409
PspFI CCCAGC 1 cut(s) 397
PspN4I GGNNCC 7 cut(s) 131, 179, 248, 364, 410, 411, 417
PspPI GGNCC 6 cut(s) 178, 247, 301, 319, 409, 415
PspPPI RGGWCCY 1 cut(s) 409
PspXI VCTCGAGB 2 cut(s) 390, 446
PstNI CAGNNNCTG 1 cut(s) 256
PsuI RGATCY 2 cut(s) 70, 362
RsaI GTAC 1 cut(s) 555
RsaNI GTAC 1 cut(s) 554
SacII CCGCGG 1 cut(s) 461
SalI GTCGAC 1 cut(s) 539
SapI GCTCTTC 1 cut(s) 255
SaqAI TTAA 3 cut(s) 206, 579, 583
SatI GCNGC 8 cut(s) 17, 26, 57, 254, 300, 452, 461, 477
Sau3AI GATC 2 cut(s) 70, 362
Sau96I GGNCC 6 cut(s) 178, 247, 301, 319, 409, 415
SchI GAGTC 2 cut(s) 168, 536
SduI GDGCHC 3 cut(s) 48, 267, 404
SetI ASST 6 cut(s) 131, 171, 244, 275, 374, 453
Sfr274I CTCGAG 2 cut(s) 390, 446
Sfr303I CCGCGG 1 cut(s) 461
SgrBI CCGCGG 1 cut(s) 461
SinI GGWCC 4 cut(s) 247, 319, 409, 415
SlaI CTCGAG 2 cut(s) 390, 446
SmaI CCCGGG 2 cut(s) 36, 526
SmlI CTYRAG 2 cut(s) 390, 446
SmoI CTYRAG 2 cut(s) 390, 446
Sse9I AATT 1 cut(s) 580
SspI AATATT 1 cut(s) 92
TaaI ACNGT 2 cut(s) 538, 576
TaiI ACGT 2 cut(s) 171, 275
TaqI TCGA 3 cut(s) 391, 447, 540
TaqII GACCGA 1 cut(s) 336
TasI AATT 1 cut(s) 580
TauI GCSGC 6 cut(s) 19, 59, 256, 302, 463, 479
TfiI GAWTC 1 cut(s) 567
Tru1I TTAA 3 cut(s) 206, 579, 583
Tru9I TTAA 3 cut(s) 206, 579, 583
TseI GCWGC 2 cut(s) 25, 451
TspGWI ACGGA 3 cut(s) 355, 510, 571
TspMI CCCGGG 2 cut(s) 34, 524
Van91I CCANNNNNTGG 1 cut(s) 256
VpaK11BI GGWCC 4 cut(s) 247, 319, 409, 415
XhoI CTCGAG 2 cut(s) 390, 446
XmaI CCCGGG 2 cut(s) 34, 524
XmiI GTMKAC 1 cut(s) 540
ZraI GACGTC 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.