Rroxscaffold_38G00444530

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000038
OG0000104
Physical Location & Seq
Reverse (-)
39997 .. 42344
2348 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_38G00444530.1

Sequence Viewer

Length: 576 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCCGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGCCAGTCTCTCACACAATATGTTTTGCTCGACCTGCTTGGCACTTGACAGTCATCTCGGACTCTGCTTGGCCTTGCCGACAGACGCTTCCTAACGAATGCGATGCCAAGCCAAGGCTAGGCAATGCCGTGGCCGACAGAGGCTTCCTAGCGAAGGATAATGCAATGCCGAGCCAAGGCTTTGCCAAGACAATGCCAAGGCTTGCTAGTGAGGCTAATGCAATGTCAAGCCAAGGCTTGCCAAGACAATGCCAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

191

Amino Acids

20.77

Weight (kDa)

10.65

Isoelectric Point (pI)

59.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 358
AccB7I CCANNNNNTGG 1 cut(s) 202
AccBSI CCGCTC 1 cut(s) 56
AccII CGCG 2 cut(s) 16, 223
AccIII TCCGGA 1 cut(s) 259
AciI CCGC 8 cut(s) 16, 19, 51, 56, 199, 214, 245, 301
AcoI YGGCCR 2 cut(s) 57, 447
AfaI GTAC 1 cut(s) 292
AfiI CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 429, 434, 469, 491
AgsI TTSAA 3 cut(s) 96, 110, 254
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 2 cut(s) 33, 166
Alw21I GWGCWC 1 cut(s) 213
Alw26I GTCTC 2 cut(s) 315, 328
AlwNI CAGNNNCTG 1 cut(s) 202
Aor13HI TCCGGA 1 cut(s) 259
AoxI GGCC 7 cut(s) 57, 112, 155, 246, 317, 386, 447
ApeKI GCWGC 1 cut(s) 25
AspLEI GCGC 2 cut(s) 16, 239
AspS9I GGNCC 3 cut(s) 193, 247, 265
AsuC2I CCSGG 3 cut(s) 48, 242, 285
AvaII GGWCC 2 cut(s) 193, 265
BanII GRGCYC 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 213
BbvI GCAGC 1 cut(s) 12
BceAI ACGGC 4 cut(s) 44, 157, 190, 428
BcgI CGANNNNNNTGC 2 cut(s) 401, 435
BciT130I CCWGG 2 cut(s) 35, 168
BcnI CCSGG 3 cut(s) 48, 242, 285
BcoDI GTCTC 2 cut(s) 315, 328
BfaI CTAG 4 cut(s) 434, 464, 522, 574
BfuAI ACCTGC 1 cut(s) 358
BglI GCCNNNNNGGC 1 cut(s) 245
BglII AGATCT 1 cut(s) 70
BisI GCNGC 5 cut(s) 17, 26, 57, 200, 246
BlpI GCTNAGC 1 cut(s) 178
BlsI GCNGC 5 cut(s) 18, 27, 58, 201, 247
Bme1390I CCNGG 5 cut(s) 35, 48, 168, 242, 285
Bme18I GGWCC 2 cut(s) 193, 265
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 3 cut(s) 193, 247, 265
BmiI GGNNCC 2 cut(s) 131, 194
BmrFI CCNGG 5 cut(s) 35, 48, 168, 242, 285
BmsI GCATC 2 cut(s) 312, 409
Bpu1102I GCTNAGC 1 cut(s) 178
BpuMI CCSGG 3 cut(s) 48, 242, 285
BsaI GGTCTC 1 cut(s) 315
BsaWI WCCGGW 2 cut(s) 231, 259
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 177, 207
Bsc4I CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 429, 434, 469, 491
Bse1I ACTGG 1 cut(s) 320
Bse3DI GCAATG 3 cut(s) 445, 486, 543
BseAI TCCGGA 1 cut(s) 259
BseBI CCWGG 2 cut(s) 35, 168
BseLI CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 429, 434, 469, 491
BseMI GCAATG 3 cut(s) 445, 486, 543
BseMII CTCAG 1 cut(s) 192
BseNI ACTGG 1 cut(s) 320
BseX3I CGGCCG 1 cut(s) 57
BseXI GCAGC 1 cut(s) 12
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 2 cut(s) 16, 223
Bsh1285I CGRYCG 3 cut(s) 23, 60, 289
BshFI GGCC 7 cut(s) 59, 114, 157, 248, 319, 388, 449
BsiEI CGRYCG 3 cut(s) 23, 60, 289
BsiHKAI GWGCWC 1 cut(s) 213
BsiSI CCGG 6 cut(s) 48, 183, 232, 242, 260, 285
BslI CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 429, 434, 469, 491
BsmAI GTCTC 2 cut(s) 315, 328
BsmI GAATGC 1 cut(s) 419
BsnI GGCC 7 cut(s) 59, 114, 157, 248, 319, 388, 449
Bso31I GGTCTC 1 cut(s) 315
Bsp1286I GDGCHC 2 cut(s) 48, 213
Bsp13I TCCGGA 1 cut(s) 259
Bsp143I GATC 1 cut(s) 70
Bsp1720I GCTNAGC 1 cut(s) 178
BspACI CCGC 8 cut(s) 16, 19, 51, 56, 199, 214, 245, 301
BspANI GGCC 7 cut(s) 59, 114, 157, 248, 319, 388, 449
BspCNI CTCAG 1 cut(s) 191
BspEI TCCGGA 1 cut(s) 259
BspFNI CGCG 2 cut(s) 16, 223
BspLI GGNNCC 2 cut(s) 131, 194
BspMI ACCTGC 1 cut(s) 358
BspQI GCTCTTC 1 cut(s) 201
BspTNI GGTCTC 1 cut(s) 315
BsrBI CCGCTC 1 cut(s) 56
BsrDI GCAATG 3 cut(s) 445, 486, 543
BsrI ACTGG 1 cut(s) 320
BssMI GATC 1 cut(s) 70
BssT1I CCWWGG 6 cut(s) 314, 428, 490, 512, 547, 568
Bst2UI CCWGG 2 cut(s) 35, 168
Bst4CI ACNGT 1 cut(s) 367
Bst6I CTCTTC 2 cut(s) 112, 201
BstC8I GCNNGC 3 cut(s) 159, 519, 554
BstDEI CTNAG 1 cut(s) 178
BstDSI CCRYGG 1 cut(s) 444
BstENI CCTNNNNNAGG 1 cut(s) 467
BstFNI CGCG 2 cut(s) 16, 223
BstHHI GCGC 2 cut(s) 16, 239
BstKTI GATC 1 cut(s) 73
BstMAI GTCTC 2 cut(s) 315, 328
BstMBI GATC 1 cut(s) 70
BstMCI CGRYCG 3 cut(s) 23, 60, 289
BstMWI GCNNNNNNNGC 8 cut(s) 22, 25, 65, 208, 245, 280, 350, 527
BstNI CCWGG 2 cut(s) 35, 168
BstSCI CCNGG 5 cut(s) 33, 46, 166, 240, 283
BstUI CGCG 2 cut(s) 16, 223
BstV1I GCAGC 1 cut(s) 12
BstX2I RGATCY 1 cut(s) 70
BstYI RGATCY 1 cut(s) 70
BstZI CGGCCG 1 cut(s) 57
BsuRI GGCC 7 cut(s) 59, 114, 157, 248, 319, 388, 449
BtgI CCRYGG 1 cut(s) 444
BtgZI GCGATG 1 cut(s) 432
BtrI CACGTC 1 cut(s) 219
BveI ACCTGC 1 cut(s) 358
Cac8I GCNNGC 3 cut(s) 159, 519, 554
CaiI CAGNNNCTG 1 cut(s) 202
CfoI GCGC 2 cut(s) 16, 239
Cfr13I GGNCC 3 cut(s) 193, 247, 265
CseI GACGC 1 cut(s) 409
Csp6I GTAC 1 cut(s) 291
CviAII CATG 2 cut(s) 134, 153
CviQI GTAC 1 cut(s) 291
DdeI CTNAG 1 cut(s) 178
DpnI GATC 1 cut(s) 72
DpnII GATC 1 cut(s) 70
EaeI YGGCCR 2 cut(s) 57, 447
EagI CGGCCG 1 cut(s) 57
Eam1104I CTCTTC 2 cut(s) 112, 201
EarI CTCTTC 2 cut(s) 112, 201
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 1 cut(s) 57
Eco130I CCWWGG 6 cut(s) 314, 428, 490, 512, 547, 568
Eco24I GRGCYC 1 cut(s) 48
Eco31I GGTCTC 1 cut(s) 315
Eco47I GGWCC 2 cut(s) 193, 265
Eco52I CGGCCG 1 cut(s) 57
EcoNI CCTNNNNNAGG 1 cut(s) 467
EcoRII CCWGG 2 cut(s) 33, 166
EcoT14I CCWWGG 6 cut(s) 314, 428, 490, 512, 547, 568
EcoT38I GRGCYC 1 cut(s) 48
ErhI CCWWGG 6 cut(s) 314, 428, 490, 512, 547, 568
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 4 cut(s) 135, 154, 297, 337
FatI CATG 2 cut(s) 133, 152
Fnu4HI GCNGC 5 cut(s) 17, 26, 57, 200, 246
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 5 cut(s) 17, 26, 57, 200, 246
FspBI CTAG 4 cut(s) 434, 464, 522, 574
GlaI GCGC 2 cut(s) 15, 238
GluI GCNGC 5 cut(s) 17, 26, 57, 200, 246
HaeIII GGCC 7 cut(s) 59, 114, 157, 248, 319, 388, 449
HapII CCGG 6 cut(s) 48, 183, 232, 242, 260, 285
HgaI GACGC 1 cut(s) 409
HhaI GCGC 2 cut(s) 16, 239
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 2 cut(s) 14, 237
HinP1I GCGC 2 cut(s) 14, 237
HinfI GANTC 1 cut(s) 377
HpaII CCGG 6 cut(s) 48, 183, 232, 242, 260, 285
Hpy166II GTNNAC 1 cut(s) 139
Hpy188I TCNGA 1 cut(s) 376
Hpy188III TCNNGA 1 cut(s) 260
Hpy8I GTNNAC 1 cut(s) 139
Hpy99I CGWCG 2 cut(s) 65, 223
HpyAV CCTTC 2 cut(s) 104, 463
HpyCH4III ACNGT 1 cut(s) 367
HpyCH4IV ACGT 1 cut(s) 218
HpyCH4V TGCA 5 cut(s) 28, 68, 150, 479, 536
HpyF10VI GCNNNNNNNGC 8 cut(s) 22, 25, 65, 208, 245, 280, 350, 527
HpyF3I CTNAG 1 cut(s) 178
HpySE526I ACGT 1 cut(s) 218
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 2 cut(s) 14, 237
Kpn2I TCCGGA 1 cut(s) 259
Kzo9I GATC 1 cut(s) 70
LguI GCTCTTC 1 cut(s) 201
LmnI GCTCC 1 cut(s) 53
Lsp1109I GCAGC 1 cut(s) 12
LweI GCATC 2 cut(s) 312, 409
MaeI CTAG 4 cut(s) 434, 464, 522, 574
MaeII ACGT 1 cut(s) 218
MalI GATC 1 cut(s) 72
MbiI CCGCTC 1 cut(s) 56
MboI GATC 1 cut(s) 70
MboII GAAGA 2 cut(s) 129, 218
MflI RGATCY 1 cut(s) 70
MhlI GDGCHC 2 cut(s) 48, 213
MlyI GAGTC 1 cut(s) 371
MnlI CCTC 6 cut(s) 3, 113, 179, 256, 449, 520
MroI TCCGGA 1 cut(s) 259
MspA1I CMGCKG 1 cut(s) 199
MspI CCGG 6 cut(s) 48, 183, 232, 242, 260, 285
MspR9I CCNGG 5 cut(s) 35, 48, 168, 242, 285
Mva1269I GAATGC 1 cut(s) 419
MvaI CCWGG 2 cut(s) 35, 168
MvnI CGCG 2 cut(s) 16, 223
MwoI GCNNNNNNNGC 8 cut(s) 22, 25, 65, 208, 245, 280, 350, 527
NciI CCSGG 3 cut(s) 48, 242, 285
NdeII GATC 1 cut(s) 70
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 2 cut(s) 131, 194
NmeAIII GCCGAG 1 cut(s) 510
PciSI GCTCTTC 1 cut(s) 201
PctI GAATGC 1 cut(s) 419
PflMI CCANNNNNTGG 1 cut(s) 202
PkrI GCNGC 5 cut(s) 18, 27, 58, 201, 247
PleI GAGTC 1 cut(s) 371
PpsI GAGTC 1 cut(s) 371
Psp6I CCWGG 2 cut(s) 33, 166
PspGI CCWGG 2 cut(s) 33, 166
PspN4I GGNNCC 2 cut(s) 131, 194
PspPI GGNCC 3 cut(s) 193, 247, 265
PstNI CAGNNNCTG 1 cut(s) 202
PsuI RGATCY 1 cut(s) 70
RsaI GTAC 1 cut(s) 292
RsaNI GTAC 1 cut(s) 291
SapI GCTCTTC 1 cut(s) 201
SatI GCNGC 5 cut(s) 17, 26, 57, 200, 246
Sau3AI GATC 1 cut(s) 70
Sau96I GGNCC 3 cut(s) 193, 247, 265
SchI GAGTC 1 cut(s) 371
ScrFI CCNGG 5 cut(s) 35, 48, 168, 242, 285
SduI GDGCHC 2 cut(s) 48, 213
SetI ASST 6 cut(s) 36, 131, 190, 221, 311, 352
SfaNI GCATC 2 cut(s) 312, 409
SinI GGWCC 2 cut(s) 193, 265
SsiI CCGC 8 cut(s) 16, 19, 51, 56, 199, 214, 245, 301
SspI AATATT 1 cut(s) 92
SspMI CTAG 4 cut(s) 434, 464, 522, 574
StyD4I CCNGG 5 cut(s) 33, 46, 166, 240, 283
StyI CCWWGG 6 cut(s) 314, 428, 490, 512, 547, 568
TaaI ACNGT 1 cut(s) 367
TaiI ACGT 1 cut(s) 221
TaqI TCGA 1 cut(s) 346
TaqII GACCGA 1 cut(s) 282
TauI GCSGC 4 cut(s) 19, 59, 202, 248
TseI GCWGC 1 cut(s) 25
Van91I CCANNNNNTGG 1 cut(s) 202
VpaK11BI GGWCC 2 cut(s) 193, 265
XagI CCTNNNNNAGG 1 cut(s) 467
XspI CTAG 4 cut(s) 434, 464, 522, 574
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.