Rroxscaffold_38G00444600

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000038
OG0000104
Physical Location & Seq
Reverse (-)
86048 .. 89376
3329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_38G00444600.1

Sequence Viewer

Length: 864 bp
ATGGGGGCCGGCGATGCGCCTCGGTCGGATGTGGAACGGTCACAAGCCGGTCCGCCACTCGACTCGGGCGTGGACCGTTACGGATTGCGGCGGGCGGCCAAAGCCCGGCTGTTGATATGCCCGTGGAGACGTCGTCGACGCGATCATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCTGCGGGGCGAAGCCAGAGGAAACTCTGGTGGTGGAGGCCCGCAGCGATACCGACGTGCAAATCGACGGCGTGGCTGCTTTGTTGAGCCACGCCAAGGAATCGAGAGCTCCAAGTGGGCCATTTTTGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGCAAGGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGCTCCCTTCGGGGGCTTTCCCGGGCGTTCAACAGTCGACTCAGAACTGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGACGCTTCCTAACGAATGCGATGCCAAGCCAAGGCTAGGCAATGCCGTGGCTGACAGAGGCTTCCTAGCGAAGGATAATGCAATGCCGAGCCAAGGCTTTGCCAAGACAATGCCAAGGCTTGCTAGTGAGGCTAATGCAATGTCAAGCCAAGGCTTGCCAAGACAATGCCAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

287

Amino Acids

29.94

Weight (kDa)

10.32

Isoelectric Point (pI)

60.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 133
AccB7I CCANNNNNTGG 1 cut(s) 368
AccBSI CCGCTC 1 cut(s) 529
AccI GTMKAC 2 cut(s) 136, 602
AccII CGCG 5 cut(s) 141, 389, 520, 539, 652
AclWI GGATC 2 cut(s) 417, 430
AcoI YGGCCR 2 cut(s) 96, 545
AcsI RAATTY 1 cut(s) 638
AcyI GRCGYC 1 cut(s) 130
AflII CTTAAG 1 cut(s) 683
AgsI TTSAA 2 cut(s) 596, 643
AjiI CACGTC 2 cut(s) 250, 385
AjnI CCWGG 1 cut(s) 331
AluBI AGCT 2 cut(s) 302, 511
AluI AGCT 2 cut(s) 302, 511
Alw21I GWGCWC 4 cut(s) 194, 304, 379, 619
Alw26I GTCTC 2 cut(s) 121, 171
AlwI GGATC 2 cut(s) 417, 430
AlwNI CAGNNNCTG 1 cut(s) 368
Ama87I CYCGRG 4 cut(s) 64, 433, 506, 586
AoxI GGCC 5 cut(s) 6, 96, 231, 311, 545
ApeKI GCWGC 4 cut(s) 154, 237, 269, 511
ApoI RAATTY 1 cut(s) 638
Asp700I GAANNNNTTC 1 cut(s) 638
AspLEI GCGC 3 cut(s) 19, 163, 652
AspS9I GGNCC 7 cut(s) 6, 50, 73, 232, 311, 359, 469
AsuC2I CCSGG 4 cut(s) 106, 549, 587, 588
AsuHPI GGTGA 1 cut(s) 509
AvaI CYCGRG 4 cut(s) 64, 433, 506, 586
AvaII GGWCC 4 cut(s) 50, 73, 359, 469
BaeGI GKGCMC 1 cut(s) 465
BaeI ACNNNNGTAYC 2 cut(s) 234, 267
BamHI GGATCC 1 cut(s) 422
BanII GRGCYC 1 cut(s) 304
Bbv12I GWGCWC 4 cut(s) 194, 304, 379, 619
BbvI GCAGC 4 cut(s) 166, 249, 256, 498
BceAI ACGGC 5 cut(s) 148, 277, 355, 676, 716
BcgI CGANNNNNNTGC 2 cut(s) 689, 723
BciT130I CCWGG 1 cut(s) 333
BcnI CCSGG 4 cut(s) 106, 549, 587, 588
BcoDI GTCTC 2 cut(s) 121, 171
BfaI CTAG 4 cut(s) 722, 752, 810, 862
BfrI CTTAAG 1 cut(s) 683
BglI GCCNNNNNGGC 1 cut(s) 169
BisI GCNGC 9 cut(s) 89, 96, 155, 238, 270, 366, 512, 521, 537
BlpI GCTNAGC 1 cut(s) 343
BlsI GCNGC 9 cut(s) 90, 97, 156, 239, 271, 367, 513, 522, 538
Bme1390I CCNGG 5 cut(s) 106, 333, 549, 587, 588
Bme18I GGWCC 4 cut(s) 50, 73, 359, 469
BmeT110I CYCGRG 4 cut(s) 64, 433, 506, 586
BmgBI CACGTC 2 cut(s) 250, 385
BmgT120I GGNCC 7 cut(s) 6, 50, 73, 232, 311, 359, 469
BmiI GGNNCC 5 cut(s) 7, 360, 424, 470, 471
BmrFI CCNGG 5 cut(s) 106, 333, 549, 587, 588
BmrI ACTGGG 2 cut(s) 467, 569
BmsI GCATC 3 cut(s) 4, 191, 697
BmuI ACTGGG 2 cut(s) 467, 569
Bpu1102I GCTNAGC 1 cut(s) 343
BpuMI CCSGG 4 cut(s) 106, 549, 587, 588
BsaHI GRCGYC 1 cut(s) 130
BsaXI ACNNNNNCTCC 2 cut(s) 118, 148
Bse118I RCCGGY 3 cut(s) 8, 47, 543
Bse1I ACTGG 2 cut(s) 473, 564
Bse3DI GCAATG 3 cut(s) 733, 774, 831
BseBI CCWGG 1 cut(s) 333
BseGI GGATG 1 cut(s) 34
BseMI GCAATG 3 cut(s) 733, 774, 831
BseMII CTCAG 3 cut(s) 357, 443, 620
BseNI ACTGG 2 cut(s) 473, 564
BseSI GKGCMC 1 cut(s) 465
BseX3I CGGCCG 1 cut(s) 545
BseXI GCAGC 4 cut(s) 166, 249, 256, 498
BseYI CCCAGC 1 cut(s) 458
Bsh1236I CGCG 5 cut(s) 141, 389, 520, 539, 652
Bsh1285I CGRYCG 2 cut(s) 26, 548
BshFI GGCC 5 cut(s) 8, 98, 233, 313, 547
BsiEI CGRYCG 2 cut(s) 26, 548
BsiHKAI GWGCWC 4 cut(s) 194, 304, 379, 619
BsiHKCI CYCGRG 4 cut(s) 64, 433, 506, 586
BsiSI CCGG 8 cut(s) 9, 48, 106, 348, 398, 544, 548, 587
BslFI GGGAC 3 cut(s) 455, 461, 566
BsmAI GTCTC 2 cut(s) 121, 171
BsmBI CGTCTC 2 cut(s) 121, 171
BsmFI GGGAC 3 cut(s) 455, 461, 566
BsmI GAATGC 1 cut(s) 707
BsnI GGCC 5 cut(s) 8, 98, 233, 313, 547
BsoBI CYCGRG 4 cut(s) 64, 433, 506, 586
Bsp1286I GDGCHC 5 cut(s) 194, 304, 379, 465, 619
Bsp143I GATC 2 cut(s) 142, 422
Bsp1720I GCTNAGC 1 cut(s) 343
BspANI GGCC 5 cut(s) 8, 98, 233, 313, 547
BspCNI CTCAG 3 cut(s) 356, 444, 619
BspFNI CGCG 5 cut(s) 141, 389, 520, 539, 652
BspLI GGNNCC 5 cut(s) 7, 360, 424, 470, 471
BspPI GGATC 2 cut(s) 417, 430
BspQI GCTCTTC 1 cut(s) 367
BspTI CTTAAG 1 cut(s) 683
BsrBI CCGCTC 1 cut(s) 529
BsrDI GCAATG 3 cut(s) 733, 774, 831
BsrFI RCCGGY 3 cut(s) 8, 47, 543
BsrI ACTGG 2 cut(s) 473, 564
BssAI RCCGGY 3 cut(s) 8, 47, 543
BssMI GATC 2 cut(s) 142, 422
BssNI GRCGYC 1 cut(s) 130
BssT1I CCWWGG 6 cut(s) 288, 716, 778, 800, 835, 856
Bst2UI CCWGG 1 cut(s) 333
Bst4CI ACNGT 4 cut(s) 39, 77, 600, 614
Bst6I CTCTTC 1 cut(s) 367
BstACI GRCGYC 1 cut(s) 130
BstAFI CTTAAG 1 cut(s) 683
BstDEI CTNAG 3 cut(s) 343, 452, 606
BstDSI CCRYGG 3 cut(s) 122, 518, 732
BstENI CCTNNNNNAGG 1 cut(s) 755
BstF5I GGATG 1 cut(s) 34
BstFNI CGCG 5 cut(s) 141, 389, 520, 539, 652
BstHHI GCGC 3 cut(s) 19, 163, 652
BstKTI GATC 2 cut(s) 145, 425
BstMAI GTCTC 2 cut(s) 121, 171
BstMBI GATC 2 cut(s) 142, 422
BstMCI CGRYCG 2 cut(s) 26, 548
BstNI CCWGG 1 cut(s) 333
BstNSI RCATGY 1 cut(s) 161
BstSCI CCNGG 5 cut(s) 104, 331, 547, 585, 586
BstSLI GKGCMC 1 cut(s) 465
BstUI CGCG 5 cut(s) 141, 389, 520, 539, 652
BstV1I GCAGC 4 cut(s) 166, 249, 256, 498
BstX2I RGATCY 1 cut(s) 422
BstYI RGATCY 1 cut(s) 422
BstZI CGGCCG 1 cut(s) 545
BsuRI GGCC 5 cut(s) 8, 98, 233, 313, 547
BtgI CCRYGG 3 cut(s) 122, 518, 732
BtgZI GCGATG 2 cut(s) 27, 720
BtrI CACGTC 2 cut(s) 250, 385
BtsCI GGATG 1 cut(s) 34
CaiI CAGNNNCTG 1 cut(s) 368
CfoI GCGC 3 cut(s) 19, 163, 652
Cfr10I RCCGGY 3 cut(s) 8, 47, 543
Cfr13I GGNCC 7 cut(s) 6, 50, 73, 232, 311, 359, 469
Cfr42I CCGCGG 1 cut(s) 521
Cfr9I CCCGGG 1 cut(s) 586
CpoI CGGWCCG 1 cut(s) 50
CseI GACGC 2 cut(s) 147, 697
CspI CGGWCCG 1 cut(s) 50
CviAII CATG 2 cut(s) 146, 158
DdeI CTNAG 3 cut(s) 343, 452, 606
DpnI GATC 2 cut(s) 144, 424
DpnII GATC 2 cut(s) 142, 422
EaeI YGGCCR 2 cut(s) 96, 545
EagI CGGCCG 1 cut(s) 545
Eam1104I CTCTTC 1 cut(s) 367
EarI CTCTTC 1 cut(s) 367
EciI GGCGGA 1 cut(s) 42
Ecl136II GAGCTC 1 cut(s) 302
EclXI CGGCCG 1 cut(s) 545
Eco130I CCWWGG 6 cut(s) 288, 716, 778, 800, 835, 856
Eco24I GRGCYC 1 cut(s) 304
Eco47I GGWCC 4 cut(s) 50, 73, 359, 469
Eco52I CGGCCG 1 cut(s) 545
Eco53kI GAGCTC 1 cut(s) 302
Eco88I CYCGRG 4 cut(s) 64, 433, 506, 586
EcoICRI GAGCTC 1 cut(s) 302
EcoNI CCTNNNNNAGG 1 cut(s) 755
EcoO109I RGGNCCY 1 cut(s) 469
EcoRII CCWGG 1 cut(s) 331
EcoT14I CCWWGG 6 cut(s) 288, 716, 778, 800, 835, 856
EcoT38I GRGCYC 1 cut(s) 304
ErhI CCWWGG 6 cut(s) 288, 716, 778, 800, 835, 856
Esp3I CGTCTC 2 cut(s) 121, 171
FaeI CATG 2 cut(s) 149, 161
FaiI YATR 4 cut(s) 118, 147, 159, 675
FaqI GGGAC 3 cut(s) 455, 461, 566
FatI CATG 2 cut(s) 145, 157
FauI CCCGC 6 cut(s) 84, 191, 242, 522, 645, 656
FblI GTMKAC 2 cut(s) 136, 602
Fnu4HI GCNGC 9 cut(s) 89, 96, 155, 238, 270, 366, 512, 521, 537
FokI GGATG 1 cut(s) 41
FriOI GRGCYC 1 cut(s) 304
Fsp4HI GCNGC 9 cut(s) 89, 96, 155, 238, 270, 366, 512, 521, 537
FspBI CTAG 4 cut(s) 722, 752, 810, 862
GlaI GCGC 3 cut(s) 18, 162, 651
GluI GCNGC 9 cut(s) 89, 96, 155, 238, 270, 366, 512, 521, 537
GsaI CCCAGC 1 cut(s) 462
HaeIII GGCC 5 cut(s) 8, 98, 233, 313, 547
HapII CCGG 8 cut(s) 9, 48, 106, 348, 398, 544, 548, 587
HgaI GACGC 2 cut(s) 147, 697
HhaI GCGC 3 cut(s) 19, 163, 652
Hin1I GRCGYC 1 cut(s) 130
Hin1II CATG 2 cut(s) 149, 161
Hin6I GCGC 3 cut(s) 17, 161, 650
HinP1I GCGC 3 cut(s) 17, 161, 650
HincII GTYRAC 2 cut(s) 137, 603
HindII GTYRAC 2 cut(s) 137, 603
HinfI GANTC 4 cut(s) 62, 293, 604, 677
HpaII CCGG 8 cut(s) 9, 48, 106, 348, 398, 544, 548, 587
HphI GGTGA 1 cut(s) 509
Hpy166II GTNNAC 5 cut(s) 73, 137, 500, 603, 658
Hpy188I TCNGA 4 cut(s) 28, 453, 609, 621
Hpy188III TCNNGA 3 cut(s) 297, 435, 478
Hpy8I GTNNAC 5 cut(s) 73, 137, 500, 603, 658
Hpy99I CGWCG 7 cut(s) 135, 138, 141, 251, 263, 389, 490
HpyAV CCTTC 2 cut(s) 582, 751
HpyCH4III ACNGT 4 cut(s) 39, 77, 600, 614
HpyCH4IV ACGT 3 cut(s) 130, 249, 384
HpyCH4V TGCA 3 cut(s) 253, 767, 824
HpyF3I CTNAG 3 cut(s) 343, 452, 606
HpySE526I ACGT 3 cut(s) 130, 249, 384
Hsp92I GRCGYC 1 cut(s) 130
Hsp92II CATG 2 cut(s) 149, 161
HspAI GCGC 3 cut(s) 17, 161, 650
KflI GGGWCCC 1 cut(s) 469
KroI GCCGGC 2 cut(s) 8, 543
KroNI GCCGGC 2 cut(s) 10, 545
KspI CCGCGG 1 cut(s) 521
Kzo9I GATC 2 cut(s) 142, 422
LguI GCTCTTC 1 cut(s) 367
LmnI GCTCC 3 cut(s) 197, 307, 573
Lsp1109I GCAGC 4 cut(s) 166, 249, 256, 498
LweI GCATC 3 cut(s) 4, 191, 697
MaeI CTAG 4 cut(s) 722, 752, 810, 862
MaeII ACGT 3 cut(s) 130, 249, 384
MaeIII GTNAC 4 cut(s) 39, 77, 427, 668
MalI GATC 2 cut(s) 144, 424
MbiI CCGCTC 1 cut(s) 529
MboI GATC 2 cut(s) 142, 422
MboII GAAGA 2 cut(s) 384, 646
MflI RGATCY 1 cut(s) 422
MhlI GDGCHC 5 cut(s) 194, 304, 379, 465, 619
MluCI AATT 1 cut(s) 638
MlyI GAGTC 3 cut(s) 56, 598, 671
MmeI TCCRAC 1 cut(s) 6
MnlI CCTC 8 cut(s) 30, 205, 223, 344, 442, 447, 737, 808
MroNI GCCGGC 2 cut(s) 8, 543
MroXI GAANNNNTTC 1 cut(s) 638
MseI TTAA 1 cut(s) 684
MslI CAYNNNNRTG 1 cut(s) 187
MspA1I CMGCKG 2 cut(s) 365, 520
MspCI CTTAAG 1 cut(s) 683
MspI CCGG 8 cut(s) 9, 48, 106, 348, 398, 544, 548, 587
MspR9I CCNGG 5 cut(s) 106, 333, 549, 587, 588
Mva1269I GAATGC 1 cut(s) 707
MvaI CCWGG 1 cut(s) 333
MvnI CGCG 5 cut(s) 141, 389, 520, 539, 652
NaeI GCCGGC 2 cut(s) 10, 545
NciI CCSGG 4 cut(s) 106, 549, 587, 588
NdeII GATC 2 cut(s) 142, 422
NgoMIV GCCGGC 2 cut(s) 8, 543
NlaIII CATG 2 cut(s) 149, 161
NlaIV GGNNCC 5 cut(s) 7, 360, 424, 470, 471
NmeAIII GCCGAG 2 cut(s) 148, 798
NmuCI GTSAC 1 cut(s) 39
NspI RCATGY 1 cut(s) 161
PaeI GCATGC 1 cut(s) 161
PaeR7I CTCGAG 1 cut(s) 506
PciSI GCTCTTC 1 cut(s) 367
PcsI WCGNNNNNNNCGW 3 cut(s) 66, 185, 255
PctI GAATGC 1 cut(s) 707
PdiI GCCGGC 2 cut(s) 10, 545
PdmI GAANNNNTTC 1 cut(s) 638
PfeI GAWTC 1 cut(s) 293
PflFI GACNNNGTC 1 cut(s) 132
PflMI CCANNNNNTGG 1 cut(s) 368
PkrI GCNGC 9 cut(s) 90, 97, 156, 239, 271, 367, 513, 522, 538
PleI GAGTC 3 cut(s) 56, 598, 671
PpsI GAGTC 3 cut(s) 56, 598, 671
PpuMI RGGWCCY 1 cut(s) 469
Psp124BI GAGCTC 1 cut(s) 304
Psp5II RGGWCCY 1 cut(s) 469
Psp6I CCWGG 1 cut(s) 331
PspFI CCCAGC 1 cut(s) 458
PspGI CCWGG 1 cut(s) 331
PspN4I GGNNCC 5 cut(s) 7, 360, 424, 470, 471
PspPI GGNCC 7 cut(s) 6, 50, 73, 232, 311, 359, 469
PspPPI RGGWCCY 1 cut(s) 469
PspXI VCTCGAGB 1 cut(s) 506
PstNI CAGNNNCTG 1 cut(s) 368
PsuI RGATCY 1 cut(s) 422
PsyI GACNNNGTC 1 cut(s) 132
RseI CAYNNNNRTG 1 cut(s) 187
Rsr2I CGGWCCG 1 cut(s) 50
RsrII CGGWCCG 1 cut(s) 50
SacI GAGCTC 1 cut(s) 304
SacII CCGCGG 1 cut(s) 521
SalI GTCGAC 2 cut(s) 135, 601
SapI GCTCTTC 1 cut(s) 367
SaqAI TTAA 1 cut(s) 684
SatI GCNGC 9 cut(s) 89, 96, 155, 238, 270, 366, 512, 521, 537
Sau3AI GATC 2 cut(s) 142, 422
Sau96I GGNCC 7 cut(s) 6, 50, 73, 232, 311, 359, 469
SchI GAGTC 3 cut(s) 56, 598, 671
ScrFI CCNGG 5 cut(s) 106, 333, 549, 587, 588
SduI GDGCHC 5 cut(s) 194, 304, 379, 465, 619
SetI ASST 7 cut(s) 133, 252, 304, 355, 387, 434, 513
SfaNI GCATC 3 cut(s) 4, 191, 697
Sfr274I CTCGAG 1 cut(s) 506
Sfr303I CCGCGG 1 cut(s) 521
SgrBI CCGCGG 1 cut(s) 521
SgrDI CGTCGACG 1 cut(s) 135
SinI GGWCC 4 cut(s) 50, 73, 359, 469
SlaI CTCGAG 1 cut(s) 506
SmaI CCCGGG 1 cut(s) 588
SmiMI CAYNNNNRTG 1 cut(s) 187
SmlI CTYRAG 2 cut(s) 506, 683
SmoI CTYRAG 2 cut(s) 506, 683
SphI GCATGC 1 cut(s) 161
Sse9I AATT 1 cut(s) 638
SspMI CTAG 4 cut(s) 722, 752, 810, 862
SstI GAGCTC 1 cut(s) 304
StyD4I CCNGG 5 cut(s) 104, 331, 547, 585, 586
StyI CCWWGG 6 cut(s) 288, 716, 778, 800, 835, 856
TaaI ACNGT 4 cut(s) 39, 77, 600, 614
TaiI ACGT 3 cut(s) 133, 252, 387
TaqI TCGA 6 cut(s) 60, 136, 258, 296, 507, 602
TaqII GACCGA 1 cut(s) 12
TasI AATT 1 cut(s) 638
TauI GCSGC 5 cut(s) 91, 98, 368, 523, 539
TfiI GAWTC 1 cut(s) 293
Tru1I TTAA 1 cut(s) 684
Tru9I TTAA 1 cut(s) 684
TseFI GTSAC 1 cut(s) 39
TseI GCWGC 4 cut(s) 154, 237, 269, 511
Tsp45I GTSAC 1 cut(s) 39
TspGWI ACGGA 3 cut(s) 96, 415, 570
TspMI CCCGGG 1 cut(s) 586
Tth111I GACNNNGTC 1 cut(s) 132
Van91I CCANNNNNTGG 1 cut(s) 368
Vha464I CTTAAG 1 cut(s) 683
VpaK11BI GGWCC 4 cut(s) 50, 73, 359, 469
XagI CCTNNNNNAGG 1 cut(s) 755
XapI RAATTY 1 cut(s) 638
XceI RCATGY 1 cut(s) 161
XhoI CTCGAG 1 cut(s) 506
XmaI CCCGGG 1 cut(s) 586
XmiI GTMKAC 2 cut(s) 136, 602
XmnI GAANNNNTTC 1 cut(s) 638
XspI CTAG 4 cut(s) 722, 752, 810, 862
ZraI GACGTC 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.