Rroxscaffold_62G00438030

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000062
OG0000104
Physical Location & Seq
Forward (+)
196718 .. 197699
982 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_62G00438030.1

Sequence Viewer

Length: 561 bp
ATGCGGGATGAACCGGAAGCGGGTTACGGTGCCCAACTACGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACGAGCGGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTCCTGCCCACCCTGGAAACGGCTCGGCGGAGGAGGTAGGGTCCAGCGGCGGAAGAGCACCCGCACACGTCGCGTGGTGTCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACGACCTCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGCTGGGCACGGGGTCCCCGTCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGGGCTTTCCCGGGCGTTCAACGGTCGACTCGGGCTGGTACGGACAAGGGGAATCCGACTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

186

Amino Acids

20.04

Weight (kDa)

10.12

Isoelectric Point (pI)

48.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 29
AccBSI CCGCTC 2 cut(s) 86, 448
AccI GTMKAC 1 cut(s) 521
AccII CGCG 4 cut(s) 42, 197, 439, 458
AccIII TCCGGA 1 cut(s) 232
AclWI GGATC 2 cut(s) 337, 350
AcoI YGGCCR 1 cut(s) 463
AfaI GTAC 2 cut(s) 264, 535
AfiI CCNNNNNNNGG 5 cut(s) 20, 62, 143, 472, 495
AflIII ACRYGT 1 cut(s) 190
AgsI TTSAA 2 cut(s) 227, 515
AjiI CACGTC 1 cut(s) 193
AjnI CCWGG 1 cut(s) 136
AluBI AGCT 1 cut(s) 430
AluI AGCT 1 cut(s) 430
Alw21I GWGCWC 1 cut(s) 184
Alw26I GTCTC 1 cut(s) 287
AlwI GGATC 2 cut(s) 337, 350
Ama87I CYCGRG 4 cut(s) 353, 425, 505, 525
Aor13HI TCCGGA 1 cut(s) 232
AoxI GGCC 2 cut(s) 219, 463
ApeKI GCWGC 2 cut(s) 369, 430
AspLEI GCGC 2 cut(s) 44, 212
AspS9I GGNCC 4 cut(s) 165, 220, 238, 389
AsuC2I CCSGG 4 cut(s) 215, 467, 506, 507
AsuHPI GGTGA 2 cut(s) 302, 428
AvaI CYCGRG 4 cut(s) 353, 425, 505, 525
AvaII GGWCC 3 cut(s) 165, 238, 389
BaeGI GKGCMC 2 cut(s) 34, 385
BamHI GGATCC 1 cut(s) 342
BanI GGYRCC 1 cut(s) 29
Bbv12I GWGCWC 1 cut(s) 184
BbvI GCAGC 2 cut(s) 356, 417
BceAI ACGGC 1 cut(s) 160
BciT130I CCWGG 1 cut(s) 138
BcnI CCSGG 4 cut(s) 215, 467, 506, 507
BcoDI GTCTC 1 cut(s) 287
BfaI CTAG 1 cut(s) 50
BglI GCCNNNNNGGC 1 cut(s) 218
BisI GCNGC 7 cut(s) 172, 219, 370, 431, 440, 456, 463
BlsI GCNGC 7 cut(s) 173, 220, 371, 432, 441, 457, 464
Bme1390I CCNGG 5 cut(s) 138, 215, 467, 506, 507
Bme18I GGWCC 3 cut(s) 165, 238, 389
BmeT110I CYCGRG 4 cut(s) 353, 425, 505, 525
BmgBI CACGTC 1 cut(s) 193
BmgT120I GGNCC 4 cut(s) 165, 220, 238, 389
BmiI GGNNCC 5 cut(s) 31, 166, 344, 390, 391
BmrFI CCNGG 5 cut(s) 138, 215, 467, 506, 507
BmrI ACTGGG 1 cut(s) 487
BmsI GCATC 1 cut(s) 284
BmuI ACTGGG 1 cut(s) 487
BoxI GACNNNNGTC 2 cut(s) 94, 301
Bpu10I CCTNAGC 1 cut(s) 117
BpuMI CCSGG 4 cut(s) 215, 467, 506, 507
BsaI GGTCTC 1 cut(s) 287
BsaJI CCNNGG 8 cut(s) 136, 213, 286, 299, 352, 437, 466, 505
BsaWI WCCGGW 2 cut(s) 13, 232
BsaXI ACNNNNNCTCC 2 cut(s) 149, 179
Bsc4I CCNNNNNNNGG 5 cut(s) 20, 62, 143, 472, 495
Bse118I RCCGGY 1 cut(s) 256
Bse1I ACTGG 1 cut(s) 482
BseAI TCCGGA 1 cut(s) 232
BseBI CCWGG 1 cut(s) 138
BseDI CCNNGG 8 cut(s) 136, 213, 286, 299, 352, 437, 466, 505
BseGI GGATG 1 cut(s) 13
BseLI CCNNNNNNNGG 5 cut(s) 20, 62, 143, 472, 495
BseNI ACTGG 1 cut(s) 482
BseRI GAGGAG 1 cut(s) 170
BseSI GKGCMC 2 cut(s) 34, 385
BseX3I CGGCCG 1 cut(s) 463
BseXI GCAGC 2 cut(s) 356, 417
BseYI CCCAGC 1 cut(s) 378
Bsh1236I CGCG 4 cut(s) 42, 197, 439, 458
Bsh1285I CGRYCG 3 cut(s) 261, 466, 521
BshFI GGCC 2 cut(s) 221, 465
BshNI GGYRCC 1 cut(s) 29
BsiEI CGRYCG 3 cut(s) 261, 466, 521
BsiHKAI GWGCWC 1 cut(s) 184
BsiHKCI CYCGRG 4 cut(s) 353, 425, 505, 525
BsiSI CCGG 6 cut(s) 14, 215, 233, 257, 466, 506
BslFI GGGAC 3 cut(s) 102, 375, 484
BslI CCNNNNNNNGG 5 cut(s) 20, 62, 143, 472, 495
BsmAI GTCTC 1 cut(s) 287
BsmFI GGGAC 3 cut(s) 102, 375, 484
BsnI GGCC 2 cut(s) 221, 465
Bso31I GGTCTC 1 cut(s) 287
BsoBI CYCGRG 4 cut(s) 353, 425, 505, 525
Bsp1286I GDGCHC 3 cut(s) 34, 184, 385
Bsp13I TCCGGA 1 cut(s) 232
Bsp143I GATC 1 cut(s) 342
BspANI GGCC 2 cut(s) 221, 465
BspEI TCCGGA 1 cut(s) 232
BspFNI CGCG 4 cut(s) 42, 197, 439, 458
BspLI GGNNCC 5 cut(s) 31, 166, 344, 390, 391
BspPI GGATC 2 cut(s) 337, 350
BspQI GCTCTTC 1 cut(s) 172
BspT107I GGYRCC 1 cut(s) 29
BspTNI GGTCTC 1 cut(s) 287
BsrBI CCGCTC 2 cut(s) 86, 448
BsrFI RCCGGY 1 cut(s) 256
BsrI ACTGG 1 cut(s) 482
BssAI RCCGGY 1 cut(s) 256
BssECI CCNNGG 8 cut(s) 136, 213, 286, 299, 352, 437, 466, 505
BssMI GATC 1 cut(s) 342
BssT1I CCWWGG 1 cut(s) 286
Bst2UI CCWGG 1 cut(s) 138
Bst4CI ACNGT 4 cut(s) 29, 93, 519, 556
Bst6I CTCTTC 1 cut(s) 172
BstC8I GCNNGC 1 cut(s) 460
BstDEI CTNAG 1 cut(s) 117
BstDSI CCRYGG 1 cut(s) 437
BstF5I GGATG 1 cut(s) 13
BstFNI CGCG 4 cut(s) 42, 197, 439, 458
BstHHI GCGC 2 cut(s) 44, 212
BstKTI GATC 1 cut(s) 345
BstMAI GTCTC 1 cut(s) 287
BstMBI GATC 1 cut(s) 342
BstMCI CGRYCG 3 cut(s) 261, 466, 521
BstMWI GCNNNNNNNGC 8 cut(s) 194, 218, 253, 375, 430, 436, 439, 445
BstNI CCWGG 1 cut(s) 138
BstPAI GACNNNNGTC 2 cut(s) 94, 301
BstSCI CCNGG 5 cut(s) 136, 213, 465, 504, 505
BstSLI GKGCMC 2 cut(s) 34, 385
BstUI CGCG 4 cut(s) 42, 197, 439, 458
BstV1I GCAGC 2 cut(s) 356, 417
BstX2I RGATCY 1 cut(s) 342
BstYI RGATCY 1 cut(s) 342
BstZI CGGCCG 1 cut(s) 463
BsuRI GGCC 2 cut(s) 221, 465
BtgI CCRYGG 1 cut(s) 437
BtrI CACGTC 1 cut(s) 193
BtsCI GGATG 1 cut(s) 13
Cac8I GCNNGC 1 cut(s) 460
CfoI GCGC 2 cut(s) 44, 212
Cfr10I RCCGGY 1 cut(s) 256
Cfr13I GGNCC 4 cut(s) 165, 220, 238, 389
Cfr42I CCGCGG 1 cut(s) 440
Cfr9I CCCGGG 1 cut(s) 505
Csp6I GTAC 2 cut(s) 263, 534
CviAII CATG 1 cut(s) 99
CviJI RGCY 9 cut(s) 147, 221, 369, 378, 410, 430, 465, 500, 530
CviKI_1 RGCY 9 cut(s) 147, 221, 369, 378, 410, 430, 465, 500, 530
CviQI GTAC 2 cut(s) 263, 534
DdeI CTNAG 1 cut(s) 117
DpnI GATC 1 cut(s) 344
DpnII GATC 1 cut(s) 342
EaeI YGGCCR 1 cut(s) 463
EagI CGGCCG 1 cut(s) 463
Eam1104I CTCTTC 1 cut(s) 172
EarI CTCTTC 1 cut(s) 172
EciI GGCGGA 2 cut(s) 167, 189
EclXI CGGCCG 1 cut(s) 463
Eco130I CCWWGG 1 cut(s) 286
Eco31I GGTCTC 1 cut(s) 287
Eco47I GGWCC 3 cut(s) 165, 238, 389
Eco52I CGGCCG 1 cut(s) 463
Eco88I CYCGRG 4 cut(s) 353, 425, 505, 525
EcoO109I RGGNCCY 1 cut(s) 389
EcoRII CCWGG 1 cut(s) 136
EcoT14I CCWWGG 1 cut(s) 286
ErhI CCWWGG 1 cut(s) 286
FaeI CATG 1 cut(s) 102
FaiI YATR 2 cut(s) 100, 269
FaqI GGGAC 3 cut(s) 102, 375, 484
FatI CATG 1 cut(s) 98
FauI CCCGC 4 cut(s) 13, 79, 193, 441
FblI GTMKAC 1 cut(s) 521
Fnu4HI GCNGC 7 cut(s) 172, 219, 370, 431, 440, 456, 463
FokI GGATG 1 cut(s) 20
Fsp4HI GCNGC 7 cut(s) 172, 219, 370, 431, 440, 456, 463
FspBI CTAG 1 cut(s) 50
GlaI GCGC 2 cut(s) 43, 211
GluI GCNGC 7 cut(s) 172, 219, 370, 431, 440, 456, 463
GsaI CCCAGC 1 cut(s) 382
HaeIII GGCC 2 cut(s) 221, 465
HapII CCGG 6 cut(s) 14, 215, 233, 257, 466, 506
HhaI GCGC 2 cut(s) 44, 212
Hin1II CATG 1 cut(s) 102
Hin6I GCGC 2 cut(s) 42, 210
HinP1I GCGC 2 cut(s) 42, 210
HincII GTYRAC 1 cut(s) 522
HindII GTYRAC 1 cut(s) 522
HinfI GANTC 2 cut(s) 523, 547
HpaII CCGG 6 cut(s) 14, 215, 233, 257, 466, 506
HphI GGTGA 2 cut(s) 302, 428
Hpy166II GTNNAC 3 cut(s) 293, 419, 522
Hpy188I TCNGA 2 cut(s) 399, 552
Hpy188III TCNNGA 2 cut(s) 233, 355
Hpy8I GTNNAC 3 cut(s) 293, 419, 522
Hpy99I CGWCG 2 cut(s) 197, 409
HpyAV CCTTC 1 cut(s) 499
HpyCH4III ACNGT 4 cut(s) 29, 93, 519, 556
HpyCH4IV ACGT 1 cut(s) 192
HpyF10VI GCNNNNNNNGC 8 cut(s) 194, 218, 253, 375, 430, 436, 439, 445
HpyF3I CTNAG 1 cut(s) 117
HpySE526I ACGT 1 cut(s) 192
Hsp92II CATG 1 cut(s) 102
HspAI GCGC 2 cut(s) 42, 210
KflI GGGWCCC 1 cut(s) 389
Kpn2I TCCGGA 1 cut(s) 232
KspI CCGCGG 1 cut(s) 440
Kzo9I GATC 1 cut(s) 342
LguI GCTCTTC 1 cut(s) 172
LmnI GCTCC 1 cut(s) 491
Lsp1109I GCAGC 2 cut(s) 356, 417
LweI GCATC 1 cut(s) 284
MaeI CTAG 1 cut(s) 50
MaeII ACGT 1 cut(s) 192
MaeIII GTNAC 2 cut(s) 23, 347
MalI GATC 1 cut(s) 344
MbiI CCGCTC 2 cut(s) 86, 448
MboI GATC 1 cut(s) 342
MboII GAAGA 1 cut(s) 189
MflI RGATCY 1 cut(s) 342
MhlI GDGCHC 3 cut(s) 34, 184, 385
MlyI GAGTC 1 cut(s) 517
MnlI CCTC 6 cut(s) 148, 151, 229, 309, 362, 367
MroI TCCGGA 1 cut(s) 232
MseI TTAA 2 cut(s) 77, 559
MspA1I CMGCKG 2 cut(s) 171, 439
MspI CCGG 6 cut(s) 14, 215, 233, 257, 466, 506
MspR9I CCNGG 5 cut(s) 138, 215, 467, 506, 507
MvaI CCWGG 1 cut(s) 138
MvnI CGCG 4 cut(s) 42, 197, 439, 458
MwoI GCNNNNNNNGC 8 cut(s) 194, 218, 253, 375, 430, 436, 439, 445
NciI CCSGG 4 cut(s) 215, 467, 506, 507
NdeII GATC 1 cut(s) 342
NlaIII CATG 1 cut(s) 102
NlaIV GGNNCC 5 cut(s) 31, 166, 344, 390, 391
NmeAIII GCCGAG 1 cut(s) 128
PaeR7I CTCGAG 1 cut(s) 425
PciSI GCTCTTC 1 cut(s) 172
PcsI WCGNNNNNNNCGW 2 cut(s) 79, 391
PfeI GAWTC 1 cut(s) 547
PkrI GCNGC 7 cut(s) 173, 220, 371, 432, 441, 457, 464
PleI GAGTC 1 cut(s) 517
PpsI GAGTC 1 cut(s) 517
PpuMI RGGWCCY 1 cut(s) 389
PshAI GACNNNNGTC 2 cut(s) 94, 301
Psp5II RGGWCCY 1 cut(s) 389
Psp6I CCWGG 1 cut(s) 136
PspFI CCCAGC 1 cut(s) 378
PspGI CCWGG 1 cut(s) 136
PspN4I GGNNCC 5 cut(s) 31, 166, 344, 390, 391
PspPI GGNCC 4 cut(s) 165, 220, 238, 389
PspPPI RGGWCCY 1 cut(s) 389
PspXI VCTCGAGB 1 cut(s) 425
PsuI RGATCY 1 cut(s) 342
RsaI GTAC 2 cut(s) 264, 535
RsaNI GTAC 2 cut(s) 263, 534
SacII CCGCGG 1 cut(s) 440
SalI GTCGAC 1 cut(s) 520
SapI GCTCTTC 1 cut(s) 172
SaqAI TTAA 2 cut(s) 77, 559
SatI GCNGC 7 cut(s) 172, 219, 370, 431, 440, 456, 463
Sau3AI GATC 1 cut(s) 342
Sau96I GGNCC 4 cut(s) 165, 220, 238, 389
SchI GAGTC 1 cut(s) 517
ScrFI CCNGG 5 cut(s) 138, 215, 467, 506, 507
SduI GDGCHC 3 cut(s) 34, 184, 385
SetI ASST 8 cut(s) 51, 162, 195, 283, 292, 301, 354, 432
SfaNI GCATC 1 cut(s) 284
Sfr274I CTCGAG 1 cut(s) 425
Sfr303I CCGCGG 1 cut(s) 440
SgrBI CCGCGG 1 cut(s) 440
SinI GGWCC 3 cut(s) 165, 238, 389
SlaI CTCGAG 1 cut(s) 425
SmaI CCCGGG 1 cut(s) 507
SmlI CTYRAG 1 cut(s) 425
SmoI CTYRAG 1 cut(s) 425
SspMI CTAG 1 cut(s) 50
StyD4I CCNGG 5 cut(s) 136, 213, 465, 504, 505
StyI CCWWGG 1 cut(s) 286
TaaI ACNGT 4 cut(s) 29, 93, 519, 556
TaiI ACGT 1 cut(s) 195
TaqI TCGA 4 cut(s) 73, 107, 426, 521
TaqII GACCGA 2 cut(s) 255, 291
TauI GCSGC 5 cut(s) 174, 221, 442, 458, 465
TfiI GAWTC 1 cut(s) 547
Tru1I TTAA 2 cut(s) 77, 559
Tru9I TTAA 2 cut(s) 77, 559
TseI GCWGC 2 cut(s) 369, 430
TspDTI ATGAA 1 cut(s) 24
TspGWI ACGGA 3 cut(s) 335, 488, 551
TspMI CCCGGG 1 cut(s) 505
VpaK11BI GGWCC 3 cut(s) 165, 238, 389
XhoI CTCGAG 1 cut(s) 425
XmaI CCCGGG 1 cut(s) 505
XmiI GTMKAC 1 cut(s) 521
XspI CTAG 1 cut(s) 50
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.