Rroxscaffold_97G00442350

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000097
OG0000104
Physical Location & Seq
Reverse (-)
82364 .. 83129
766 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_97G00442350.1

Sequence Viewer

Length: 561 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACACAGGGCGTGAGCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTGCTGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGGCTGGGCACGGGGGTCCCGGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACGGTCGACTCGGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

186

Amino Acids

19.88

Weight (kDa)

11.4

Isoelectric Point (pI)

54.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 167
AccBSI CCGCTC 2 cut(s) 56, 444
AccI GTMKAC 1 cut(s) 516
AccII CGCG 4 cut(s) 16, 188, 435, 454
AccIII TCCGGA 1 cut(s) 223
AclWI GGATC 2 cut(s) 330, 343
AcoI YGGCCR 2 cut(s) 57, 460
AfaI GTAC 2 cut(s) 255, 531
AfiI CCNNNNNNNGG 5 cut(s) 121, 167, 458, 465, 469
AgsI TTSAA 4 cut(s) 96, 110, 218, 510
AjiI CACGTC 1 cut(s) 184
AluBI AGCT 1 cut(s) 426
AluI AGCT 1 cut(s) 426
Alw21I GWGCWC 1 cut(s) 178
Alw26I GTCTC 1 cut(s) 278
AlwI GGATC 2 cut(s) 330, 343
AlwNI CAGNNNCTG 1 cut(s) 167
Ama87I CYCGRG 3 cut(s) 346, 421, 500
Aor13HI TCCGGA 1 cut(s) 223
AoxI GGCC 4 cut(s) 57, 112, 210, 460
ApeKI GCWGC 3 cut(s) 25, 362, 426
AspLEI GCGC 2 cut(s) 16, 203
AspS9I GGNCC 5 cut(s) 158, 211, 229, 384, 390
AsuC2I CCSGG 6 cut(s) 48, 206, 388, 464, 501, 502
AsuHPI GGTGA 2 cut(s) 293, 424
AvaI CYCGRG 3 cut(s) 346, 421, 500
AvaII GGWCC 4 cut(s) 158, 229, 384, 390
BaeGI GKGCMC 1 cut(s) 379
BamHI GGATCC 1 cut(s) 335
Bbv12I GWGCWC 1 cut(s) 178
BbvI GCAGC 3 cut(s) 12, 349, 413
BceAI ACGGC 2 cut(s) 44, 157
BcnI CCSGG 6 cut(s) 48, 206, 388, 464, 501, 502
BcoDI GTCTC 1 cut(s) 278
BglI GCCNNNNNGGC 1 cut(s) 209
BglII AGATCT 1 cut(s) 70
BisI GCNGC 9 cut(s) 17, 26, 57, 165, 210, 363, 427, 436, 452
BlsI GCNGC 9 cut(s) 18, 27, 58, 166, 211, 364, 428, 437, 453
Bme1390I CCNGG 6 cut(s) 48, 206, 388, 464, 501, 502
Bme18I GGWCC 4 cut(s) 158, 229, 384, 390
BmeT110I CYCGRG 3 cut(s) 346, 421, 500
BmgBI CACGTC 1 cut(s) 184
BmgT120I GGNCC 5 cut(s) 158, 211, 229, 384, 390
BmiI GGNNCC 6 cut(s) 131, 159, 337, 385, 386, 392
BmrFI CCNGG 6 cut(s) 48, 206, 388, 464, 501, 502
BmrI ACTGGG 1 cut(s) 484
BmsI GCATC 1 cut(s) 275
BmuI ACTGGG 1 cut(s) 484
BpuMI CCSGG 6 cut(s) 48, 206, 388, 464, 501, 502
BsaI GGTCTC 1 cut(s) 278
BsaJI CCNNGG 6 cut(s) 204, 277, 345, 433, 463, 500
BsaWI WCCGGW 1 cut(s) 223
BsaXI ACNNNNNCTCC 2 cut(s) 45, 75
Bsc4I CCNNNNNNNGG 5 cut(s) 121, 167, 458, 465, 469
Bse118I RCCGGY 2 cut(s) 247, 458
Bse1I ACTGG 2 cut(s) 479, 531
BseAI TCCGGA 1 cut(s) 223
BseDI CCNNGG 6 cut(s) 204, 277, 345, 433, 463, 500
BseLI CCNNNNNNNGG 5 cut(s) 121, 167, 458, 465, 469
BseNI ACTGG 2 cut(s) 479, 531
BseSI GKGCMC 1 cut(s) 379
BseX3I CGGCCG 2 cut(s) 57, 460
BseXI GCAGC 3 cut(s) 12, 349, 413
BseYI CCCAGC 1 cut(s) 372
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 4 cut(s) 16, 188, 435, 454
Bsh1285I CGRYCG 5 cut(s) 23, 60, 252, 463, 516
BshFI GGCC 4 cut(s) 59, 114, 212, 462
BsiEI CGRYCG 5 cut(s) 23, 60, 252, 463, 516
BsiHKAI GWGCWC 1 cut(s) 178
BsiHKCI CYCGRG 3 cut(s) 346, 421, 500
BsiSI CCGG 8 cut(s) 47, 206, 224, 248, 388, 459, 463, 501
BslFI GGGAC 3 cut(s) 370, 376, 481
BslI CCNNNNNNNGG 5 cut(s) 121, 167, 458, 465, 469
BsmAI GTCTC 1 cut(s) 278
BsmFI GGGAC 3 cut(s) 370, 376, 481
BsnI GGCC 4 cut(s) 59, 114, 212, 462
Bso31I GGTCTC 1 cut(s) 278
BsoBI CYCGRG 3 cut(s) 346, 421, 500
Bsp1286I GDGCHC 2 cut(s) 178, 379
Bsp13I TCCGGA 1 cut(s) 223
Bsp143I GATC 2 cut(s) 70, 335
BspANI GGCC 4 cut(s) 59, 114, 212, 462
BspEI TCCGGA 1 cut(s) 223
BspFNI CGCG 4 cut(s) 16, 188, 435, 454
BspLI GGNNCC 6 cut(s) 131, 159, 337, 385, 386, 392
BspPI GGATC 2 cut(s) 330, 343
BspQI GCTCTTC 1 cut(s) 166
BspTNI GGTCTC 1 cut(s) 278
BsrBI CCGCTC 2 cut(s) 56, 444
BsrFI RCCGGY 2 cut(s) 247, 458
BsrI ACTGG 2 cut(s) 479, 531
BssAI RCCGGY 2 cut(s) 247, 458
BssECI CCNNGG 6 cut(s) 204, 277, 345, 433, 463, 500
BssMI GATC 2 cut(s) 70, 335
BssT1I CCWWGG 1 cut(s) 277
Bst4CI ACNGT 2 cut(s) 514, 552
Bst6I CTCTTC 2 cut(s) 112, 166
BstC8I GCNNGC 3 cut(s) 291, 456, 460
BstDSI CCRYGG 1 cut(s) 433
BstFNI CGCG 4 cut(s) 16, 188, 435, 454
BstHHI GCGC 2 cut(s) 16, 203
BstKTI GATC 2 cut(s) 73, 338
BstMAI GTCTC 1 cut(s) 278
BstMBI GATC 2 cut(s) 70, 335
BstMCI CGRYCG 5 cut(s) 23, 60, 252, 463, 516
BstSCI CCNGG 6 cut(s) 46, 204, 386, 462, 499, 500
BstSLI GKGCMC 1 cut(s) 379
BstUI CGCG 4 cut(s) 16, 188, 435, 454
BstV1I GCAGC 3 cut(s) 12, 349, 413
BstX2I RGATCY 2 cut(s) 70, 335
BstYI RGATCY 2 cut(s) 70, 335
BstZI CGGCCG 2 cut(s) 57, 460
BsuRI GGCC 4 cut(s) 59, 114, 212, 462
BtgI CCRYGG 1 cut(s) 433
BtrI CACGTC 1 cut(s) 184
Cac8I GCNNGC 3 cut(s) 291, 456, 460
CaiI CAGNNNCTG 1 cut(s) 167
CfoI GCGC 2 cut(s) 16, 203
Cfr10I RCCGGY 2 cut(s) 247, 458
Cfr13I GGNCC 5 cut(s) 158, 211, 229, 384, 390
Cfr42I CCGCGG 1 cut(s) 436
Cfr9I CCCGGG 1 cut(s) 500
Csp6I GTAC 2 cut(s) 254, 530
CviAII CATG 2 cut(s) 134, 153
CviQI GTAC 2 cut(s) 254, 530
DpnI GATC 2 cut(s) 72, 337
DpnII GATC 2 cut(s) 70, 335
EaeI YGGCCR 2 cut(s) 57, 460
EagI CGGCCG 2 cut(s) 57, 460
Eam1104I CTCTTC 2 cut(s) 112, 166
EarI CTCTTC 2 cut(s) 112, 166
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 2 cut(s) 57, 460
Eco130I CCWWGG 1 cut(s) 277
Eco31I GGTCTC 1 cut(s) 278
Eco47I GGWCC 4 cut(s) 158, 229, 384, 390
Eco52I CGGCCG 2 cut(s) 57, 460
Eco88I CYCGRG 3 cut(s) 346, 421, 500
EcoO109I RGGNCCY 1 cut(s) 384
EcoT14I CCWWGG 1 cut(s) 277
ErhI CCWWGG 1 cut(s) 277
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 3 cut(s) 135, 154, 260
FaqI GGGAC 3 cut(s) 370, 376, 481
FatI CATG 2 cut(s) 133, 152
FauI CCCGC 1 cut(s) 437
FblI GTMKAC 1 cut(s) 516
Fnu4HI GCNGC 9 cut(s) 17, 26, 57, 165, 210, 363, 427, 436, 452
Fsp4HI GCNGC 9 cut(s) 17, 26, 57, 165, 210, 363, 427, 436, 452
GlaI GCGC 2 cut(s) 15, 202
GluI GCNGC 9 cut(s) 17, 26, 57, 165, 210, 363, 427, 436, 452
GsaI CCCAGC 1 cut(s) 376
HaeIII GGCC 4 cut(s) 59, 114, 212, 462
HapII CCGG 8 cut(s) 47, 206, 224, 248, 388, 459, 463, 501
HhaI GCGC 2 cut(s) 16, 203
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 2 cut(s) 14, 201
HinP1I GCGC 2 cut(s) 14, 201
HincII GTYRAC 1 cut(s) 517
HindII GTYRAC 1 cut(s) 517
HinfI GANTC 2 cut(s) 518, 543
HpaII CCGG 8 cut(s) 47, 206, 224, 248, 388, 459, 463, 501
HphI GGTGA 2 cut(s) 293, 424
Hpy166II GTNNAC 4 cut(s) 139, 284, 415, 517
Hpy188I TCNGA 2 cut(s) 523, 548
Hpy188III TCNNGA 3 cut(s) 224, 348, 393
Hpy8I GTNNAC 4 cut(s) 139, 284, 415, 517
Hpy99I CGWCG 3 cut(s) 65, 188, 405
HpyAV CCTTC 2 cut(s) 104, 496
HpyCH4III ACNGT 2 cut(s) 514, 552
HpyCH4IV ACGT 1 cut(s) 183
HpyCH4V TGCA 3 cut(s) 28, 68, 150
HpySE526I ACGT 1 cut(s) 183
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 2 cut(s) 14, 201
KflI GGGWCCC 1 cut(s) 384
Kpn2I TCCGGA 1 cut(s) 223
KroI GCCGGC 1 cut(s) 458
KroNI GCCGGC 1 cut(s) 460
KspI CCGCGG 1 cut(s) 436
Kzo9I GATC 2 cut(s) 70, 335
LguI GCTCTTC 1 cut(s) 166
LmnI GCTCC 2 cut(s) 53, 488
Lsp1109I GCAGC 3 cut(s) 12, 349, 413
LweI GCATC 1 cut(s) 275
MaeII ACGT 1 cut(s) 183
MaeIII GTNAC 1 cut(s) 340
MalI GATC 2 cut(s) 72, 337
MbiI CCGCTC 2 cut(s) 56, 444
MboI GATC 2 cut(s) 70, 335
MboII GAAGA 2 cut(s) 129, 183
MflI RGATCY 2 cut(s) 70, 335
MhlI GDGCHC 2 cut(s) 178, 379
MluCI AATT 1 cut(s) 556
MlyI GAGTC 1 cut(s) 512
MnlI CCTC 5 cut(s) 3, 113, 220, 355, 360
MroI TCCGGA 1 cut(s) 223
MroNI GCCGGC 1 cut(s) 458
MseI TTAA 2 cut(s) 555, 559
MspA1I CMGCKG 2 cut(s) 164, 435
MspI CCGG 8 cut(s) 47, 206, 224, 248, 388, 459, 463, 501
MspR9I CCNGG 6 cut(s) 48, 206, 388, 464, 501, 502
MvnI CGCG 4 cut(s) 16, 188, 435, 454
NaeI GCCGGC 1 cut(s) 460
NciI CCSGG 6 cut(s) 48, 206, 388, 464, 501, 502
NdeII GATC 2 cut(s) 70, 335
NgoMIV GCCGGC 1 cut(s) 458
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 6 cut(s) 131, 159, 337, 385, 386, 392
PacI TTAATTAA 1 cut(s) 559
PaeR7I CTCGAG 1 cut(s) 421
PciSI GCTCTTC 1 cut(s) 166
PdiI GCCGGC 1 cut(s) 460
PfeI GAWTC 1 cut(s) 543
PflMI CCANNNNNTGG 1 cut(s) 167
PkrI GCNGC 9 cut(s) 18, 27, 58, 166, 211, 364, 428, 437, 453
PleI GAGTC 1 cut(s) 512
PpsI GAGTC 1 cut(s) 512
PpuMI RGGWCCY 1 cut(s) 384
Psp5II RGGWCCY 1 cut(s) 384
PspFI CCCAGC 1 cut(s) 372
PspN4I GGNNCC 6 cut(s) 131, 159, 337, 385, 386, 392
PspPI GGNCC 5 cut(s) 158, 211, 229, 384, 390
PspPPI RGGWCCY 1 cut(s) 384
PspXI VCTCGAGB 1 cut(s) 421
PstNI CAGNNNCTG 1 cut(s) 167
PsuI RGATCY 2 cut(s) 70, 335
RsaI GTAC 2 cut(s) 255, 531
RsaNI GTAC 2 cut(s) 254, 530
SacII CCGCGG 1 cut(s) 436
SalI GTCGAC 1 cut(s) 515
SapI GCTCTTC 1 cut(s) 166
SaqAI TTAA 2 cut(s) 555, 559
SatI GCNGC 9 cut(s) 17, 26, 57, 165, 210, 363, 427, 436, 452
Sau3AI GATC 2 cut(s) 70, 335
Sau96I GGNCC 5 cut(s) 158, 211, 229, 384, 390
SchI GAGTC 1 cut(s) 512
ScrFI CCNGG 6 cut(s) 48, 206, 388, 464, 501, 502
SduI GDGCHC 2 cut(s) 178, 379
SetI ASST 6 cut(s) 131, 186, 274, 283, 347, 428
SfaNI GCATC 1 cut(s) 275
Sfr274I CTCGAG 1 cut(s) 421
Sfr303I CCGCGG 1 cut(s) 436
SgrBI CCGCGG 1 cut(s) 436
SinI GGWCC 4 cut(s) 158, 229, 384, 390
SlaI CTCGAG 1 cut(s) 421
SmaI CCCGGG 1 cut(s) 502
SmlI CTYRAG 1 cut(s) 421
SmoI CTYRAG 1 cut(s) 421
Sse9I AATT 1 cut(s) 556
SspI AATATT 1 cut(s) 92
StyD4I CCNGG 6 cut(s) 46, 204, 386, 462, 499, 500
StyI CCWWGG 1 cut(s) 277
TaaI ACNGT 2 cut(s) 514, 552
TaiI ACGT 1 cut(s) 186
TaqI TCGA 2 cut(s) 422, 516
TaqII GACCGA 1 cut(s) 246
TasI AATT 1 cut(s) 556
TauI GCSGC 6 cut(s) 19, 59, 167, 212, 438, 454
TfiI GAWTC 1 cut(s) 543
Tru1I TTAA 2 cut(s) 555, 559
Tru9I TTAA 2 cut(s) 555, 559
TseI GCWGC 3 cut(s) 25, 362, 426
TspGWI ACGGA 3 cut(s) 328, 485, 547
TspMI CCCGGG 1 cut(s) 500
Van91I CCANNNNNTGG 1 cut(s) 167
VpaK11BI GGWCC 4 cut(s) 158, 229, 384, 390
XhoI CTCGAG 1 cut(s) 421
XmaI CCCGGG 1 cut(s) 500
XmiI GTMKAC 1 cut(s) 516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.