Rroxscaffold_107G00442440

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000107
OG0000104
Physical Location & Seq
Reverse (-)
10024 .. 12371
2348 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_107G00442440.1

Sequence Viewer

Length: 750 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCCGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGTCGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGACGGACTGGGAACGCTCCTTCGGGGCTTTCCCCGGCGTTCAACAGTCGACTCAGAACTGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGACGCTTCCTAACGAATGCGATGCCAAGCCAAGGCTAGGCAATGCCGTGGCTGACAGAGGCTTCCTAGCGAAGGATAATGCAATGCCGAGCCAAGGCTTTGCCAAGACAATGCCAAGGCTTGCTAGTGAGGCTAATGCAATGTCAAGCCAAGGCTTGCCAAGACAATGCCAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

249

Amino Acids

26.51

Weight (kDa)

10.4

Isoelectric Point (pI)

49.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 202
AccBSI CCGCTC 2 cut(s) 56, 418
AccI GTMKAC 1 cut(s) 488
AccII CGCG 5 cut(s) 16, 223, 409, 428, 538
AccIII TCCGGA 1 cut(s) 259
AclWI GGATC 2 cut(s) 306, 319
AcoI YGGCCR 2 cut(s) 57, 434
AcsI RAATTY 1 cut(s) 524
AflII CTTAAG 1 cut(s) 569
AgsI TTSAA 5 cut(s) 96, 110, 254, 482, 529
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 2 cut(s) 33, 166
AluBI AGCT 1 cut(s) 400
AluI AGCT 1 cut(s) 400
Alw21I GWGCWC 2 cut(s) 213, 505
AlwI GGATC 2 cut(s) 306, 319
AlwNI CAGNNNCTG 1 cut(s) 202
Ama87I CYCGRG 3 cut(s) 322, 339, 395
Aor13HI TCCGGA 1 cut(s) 259
AoxI GGCC 5 cut(s) 57, 112, 155, 246, 434
ApeKI GCWGC 2 cut(s) 25, 400
ApoI RAATTY 1 cut(s) 524
Asp700I GAANNNNTTC 1 cut(s) 524
AspLEI GCGC 3 cut(s) 16, 239, 538
AspS9I GGNCC 4 cut(s) 193, 247, 265, 358
AsuC2I CCSGG 5 cut(s) 48, 242, 285, 438, 474
AsuHPI GGTGA 1 cut(s) 398
AvaI CYCGRG 3 cut(s) 322, 339, 395
AvaII GGWCC 3 cut(s) 193, 265, 358
BaeGI GKGCMC 1 cut(s) 353
BamHI GGATCC 1 cut(s) 311
BanII GRGCYC 1 cut(s) 48
Bbv12I GWGCWC 2 cut(s) 213, 505
BbvI GCAGC 2 cut(s) 12, 387
BceAI ACGGC 5 cut(s) 44, 157, 190, 562, 602
BcgI CGANNNNNNTGC 2 cut(s) 575, 609
BciT130I CCWGG 2 cut(s) 35, 168
BcnI CCSGG 5 cut(s) 48, 242, 285, 438, 474
BfaI CTAG 4 cut(s) 608, 638, 696, 748
BfrI CTTAAG 1 cut(s) 569
BglI GCCNNNNNGGC 1 cut(s) 245
BglII AGATCT 1 cut(s) 70
BisI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 401, 410, 426
BlpI GCTNAGC 1 cut(s) 178
BlsI GCNGC 8 cut(s) 18, 27, 58, 201, 247, 402, 411, 427
Bme1390I CCNGG 7 cut(s) 35, 48, 168, 242, 285, 438, 474
Bme18I GGWCC 3 cut(s) 193, 265, 358
BmeT110I CYCGRG 3 cut(s) 322, 339, 395
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 4 cut(s) 193, 247, 265, 358
BmiI GGNNCC 5 cut(s) 131, 194, 313, 359, 360
BmrFI CCNGG 7 cut(s) 35, 48, 168, 242, 285, 438, 474
BmrI ACTGGG 2 cut(s) 356, 457
BmsI GCATC 1 cut(s) 583
BmuI ACTGGG 2 cut(s) 356, 457
Bpu1102I GCTNAGC 1 cut(s) 178
BpuMI CCSGG 5 cut(s) 48, 242, 285, 438, 474
BsaWI WCCGGW 2 cut(s) 231, 259
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 177, 207
Bse118I RCCGGY 1 cut(s) 432
Bse1I ACTGG 2 cut(s) 362, 452
Bse3DI GCAATG 3 cut(s) 619, 660, 717
BseAI TCCGGA 1 cut(s) 259
BseBI CCWGG 2 cut(s) 35, 168
BseMI GCAATG 3 cut(s) 619, 660, 717
BseMII CTCAG 2 cut(s) 192, 506
BseNI ACTGG 2 cut(s) 362, 452
BseSI GKGCMC 1 cut(s) 353
BseX3I CGGCCG 2 cut(s) 57, 434
BseXI GCAGC 2 cut(s) 12, 387
BseYI CCCAGC 1 cut(s) 346
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 5 cut(s) 16, 223, 409, 428, 538
Bsh1285I CGRYCG 4 cut(s) 23, 60, 289, 437
BshFI GGCC 5 cut(s) 59, 114, 157, 248, 436
BsiEI CGRYCG 4 cut(s) 23, 60, 289, 437
BsiHKAI GWGCWC 2 cut(s) 213, 505
BsiHKCI CYCGRG 3 cut(s) 322, 339, 395
BsiSI CCGG 9 cut(s) 48, 183, 232, 242, 260, 285, 433, 437, 474
BslFI GGGAC 3 cut(s) 344, 350, 454
BsmFI GGGAC 3 cut(s) 344, 350, 454
BsmI GAATGC 1 cut(s) 593
BsnI GGCC 5 cut(s) 59, 114, 157, 248, 436
BsoBI CYCGRG 3 cut(s) 322, 339, 395
Bsp1286I GDGCHC 4 cut(s) 48, 213, 353, 505
Bsp13I TCCGGA 1 cut(s) 259
Bsp143I GATC 2 cut(s) 70, 311
Bsp1720I GCTNAGC 1 cut(s) 178
BspANI GGCC 5 cut(s) 59, 114, 157, 248, 436
BspCNI CTCAG 2 cut(s) 191, 505
BspEI TCCGGA 1 cut(s) 259
BspFNI CGCG 5 cut(s) 16, 223, 409, 428, 538
BspLI GGNNCC 5 cut(s) 131, 194, 313, 359, 360
BspPI GGATC 2 cut(s) 306, 319
BspQI GCTCTTC 1 cut(s) 201
BspTI CTTAAG 1 cut(s) 569
BsrBI CCGCTC 2 cut(s) 56, 418
BsrDI GCAATG 3 cut(s) 619, 660, 717
BsrFI RCCGGY 1 cut(s) 432
BsrI ACTGG 2 cut(s) 362, 452
BssAI RCCGGY 1 cut(s) 432
BssMI GATC 2 cut(s) 70, 311
BssT1I CCWWGG 5 cut(s) 602, 664, 686, 721, 742
Bst2UI CCWGG 2 cut(s) 35, 168
Bst4CI ACNGT 2 cut(s) 486, 500
Bst6I CTCTTC 2 cut(s) 112, 201
BstAFI CTTAAG 1 cut(s) 569
BstC8I GCNNGC 5 cut(s) 159, 430, 434, 693, 728
BstDEI CTNAG 2 cut(s) 178, 492
BstDSI CCRYGG 2 cut(s) 407, 618
BstENI CCTNNNNNAGG 1 cut(s) 641
BstFNI CGCG 5 cut(s) 16, 223, 409, 428, 538
BstHHI GCGC 3 cut(s) 16, 239, 538
BstKTI GATC 2 cut(s) 73, 314
BstMBI GATC 2 cut(s) 70, 311
BstMCI CGRYCG 4 cut(s) 23, 60, 289, 437
BstNI CCWGG 2 cut(s) 35, 168
BstSCI CCNGG 7 cut(s) 33, 46, 166, 240, 283, 436, 472
BstSLI GKGCMC 1 cut(s) 353
BstUI CGCG 5 cut(s) 16, 223, 409, 428, 538
BstV1I GCAGC 2 cut(s) 12, 387
BstX2I RGATCY 2 cut(s) 70, 311
BstYI RGATCY 2 cut(s) 70, 311
BstZI CGGCCG 2 cut(s) 57, 434
BsuRI GGCC 5 cut(s) 59, 114, 157, 248, 436
BtgI CCRYGG 2 cut(s) 407, 618
BtgZI GCGATG 1 cut(s) 606
BtrI CACGTC 1 cut(s) 219
Cac8I GCNNGC 5 cut(s) 159, 430, 434, 693, 728
CaiI CAGNNNCTG 1 cut(s) 202
CfoI GCGC 3 cut(s) 16, 239, 538
Cfr10I RCCGGY 1 cut(s) 432
Cfr13I GGNCC 4 cut(s) 193, 247, 265, 358
Cfr42I CCGCGG 1 cut(s) 410
CseI GACGC 1 cut(s) 583
CviAII CATG 2 cut(s) 134, 153
DdeI CTNAG 2 cut(s) 178, 492
DpnI GATC 2 cut(s) 72, 313
DpnII GATC 2 cut(s) 70, 311
EaeI YGGCCR 2 cut(s) 57, 434
EagI CGGCCG 2 cut(s) 57, 434
Eam1104I CTCTTC 2 cut(s) 112, 201
EarI CTCTTC 2 cut(s) 112, 201
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 2 cut(s) 57, 434
Eco130I CCWWGG 5 cut(s) 602, 664, 686, 721, 742
Eco24I GRGCYC 1 cut(s) 48
Eco47I GGWCC 3 cut(s) 193, 265, 358
Eco52I CGGCCG 2 cut(s) 57, 434
Eco88I CYCGRG 3 cut(s) 322, 339, 395
EcoNI CCTNNNNNAGG 1 cut(s) 641
EcoO109I RGGNCCY 1 cut(s) 358
EcoRII CCWGG 2 cut(s) 33, 166
EcoT14I CCWWGG 5 cut(s) 602, 664, 686, 721, 742
EcoT38I GRGCYC 1 cut(s) 48
ErhI CCWWGG 5 cut(s) 602, 664, 686, 721, 742
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 3 cut(s) 135, 154, 561
FaqI GGGAC 3 cut(s) 344, 350, 454
FatI CATG 2 cut(s) 133, 152
FauI CCCGC 3 cut(s) 411, 531, 542
FblI GTMKAC 1 cut(s) 488
Fnu4HI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 401, 410, 426
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 401, 410, 426
FspBI CTAG 4 cut(s) 608, 638, 696, 748
GlaI GCGC 3 cut(s) 15, 238, 537
GluI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 401, 410, 426
GsaI CCCAGC 1 cut(s) 350
HaeIII GGCC 5 cut(s) 59, 114, 157, 248, 436
HapII CCGG 9 cut(s) 48, 183, 232, 242, 260, 285, 433, 437, 474
HgaI GACGC 1 cut(s) 583
HhaI GCGC 3 cut(s) 16, 239, 538
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 3 cut(s) 14, 237, 536
HinP1I GCGC 3 cut(s) 14, 237, 536
HincII GTYRAC 1 cut(s) 489
HindII GTYRAC 1 cut(s) 489
HinfI GANTC 2 cut(s) 490, 563
HpaII CCGG 9 cut(s) 48, 183, 232, 242, 260, 285, 433, 437, 474
HphI GGTGA 1 cut(s) 398
Hpy166II GTNNAC 4 cut(s) 139, 389, 489, 544
Hpy188I TCNGA 2 cut(s) 495, 507
Hpy188III TCNNGA 3 cut(s) 260, 324, 367
Hpy8I GTNNAC 4 cut(s) 139, 389, 489, 544
Hpy99I CGWCG 3 cut(s) 65, 223, 379
HpyAV CCTTC 3 cut(s) 104, 469, 637
HpyCH4III ACNGT 2 cut(s) 486, 500
HpyCH4IV ACGT 1 cut(s) 218
HpyCH4V TGCA 5 cut(s) 28, 68, 150, 653, 710
HpyF3I CTNAG 2 cut(s) 178, 492
HpySE526I ACGT 1 cut(s) 218
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 3 cut(s) 14, 237, 536
KflI GGGWCCC 1 cut(s) 358
Kpn2I TCCGGA 1 cut(s) 259
KroI GCCGGC 1 cut(s) 432
KroNI GCCGGC 1 cut(s) 434
KspI CCGCGG 1 cut(s) 410
Kzo9I GATC 2 cut(s) 70, 311
LguI GCTCTTC 1 cut(s) 201
LmnI GCTCC 2 cut(s) 53, 461
Lsp1109I GCAGC 2 cut(s) 12, 387
LweI GCATC 1 cut(s) 583
MaeI CTAG 4 cut(s) 608, 638, 696, 748
MaeII ACGT 1 cut(s) 218
MaeIII GTNAC 2 cut(s) 316, 554
MalI GATC 2 cut(s) 72, 313
MbiI CCGCTC 2 cut(s) 56, 418
MboI GATC 2 cut(s) 70, 311
MboII GAAGA 3 cut(s) 129, 218, 532
MflI RGATCY 2 cut(s) 70, 311
MhlI GDGCHC 4 cut(s) 48, 213, 353, 505
MluCI AATT 1 cut(s) 524
MlyI GAGTC 2 cut(s) 484, 557
MnlI CCTC 8 cut(s) 3, 113, 179, 256, 331, 335, 623, 694
MroI TCCGGA 1 cut(s) 259
MroNI GCCGGC 1 cut(s) 432
MroXI GAANNNNTTC 1 cut(s) 524
MseI TTAA 1 cut(s) 570
MspA1I CMGCKG 2 cut(s) 199, 409
MspCI CTTAAG 1 cut(s) 569
MspI CCGG 9 cut(s) 48, 183, 232, 242, 260, 285, 433, 437, 474
MspR9I CCNGG 7 cut(s) 35, 48, 168, 242, 285, 438, 474
Mva1269I GAATGC 1 cut(s) 593
MvaI CCWGG 2 cut(s) 35, 168
MvnI CGCG 5 cut(s) 16, 223, 409, 428, 538
NaeI GCCGGC 1 cut(s) 434
NciI CCSGG 5 cut(s) 48, 242, 285, 438, 474
NdeII GATC 2 cut(s) 70, 311
NgoMIV GCCGGC 1 cut(s) 432
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 5 cut(s) 131, 194, 313, 359, 360
NmeAIII GCCGAG 1 cut(s) 684
PaeR7I CTCGAG 2 cut(s) 339, 395
PciSI GCTCTTC 1 cut(s) 201
PctI GAATGC 1 cut(s) 593
PdiI GCCGGC 1 cut(s) 434
PdmI GAANNNNTTC 1 cut(s) 524
PflMI CCANNNNNTGG 1 cut(s) 202
PkrI GCNGC 8 cut(s) 18, 27, 58, 201, 247, 402, 411, 427
PleI GAGTC 2 cut(s) 484, 557
PpsI GAGTC 2 cut(s) 484, 557
PpuMI RGGWCCY 1 cut(s) 358
Psp5II RGGWCCY 1 cut(s) 358
Psp6I CCWGG 2 cut(s) 33, 166
PspFI CCCAGC 1 cut(s) 346
PspGI CCWGG 2 cut(s) 33, 166
PspN4I GGNNCC 5 cut(s) 131, 194, 313, 359, 360
PspPI GGNCC 4 cut(s) 193, 247, 265, 358
PspPPI RGGWCCY 1 cut(s) 358
PspXI VCTCGAGB 2 cut(s) 339, 395
PstNI CAGNNNCTG 1 cut(s) 202
PsuI RGATCY 2 cut(s) 70, 311
SacII CCGCGG 1 cut(s) 410
SalI GTCGAC 1 cut(s) 487
SapI GCTCTTC 1 cut(s) 201
SaqAI TTAA 1 cut(s) 570
SatI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 401, 410, 426
Sau3AI GATC 2 cut(s) 70, 311
Sau96I GGNCC 4 cut(s) 193, 247, 265, 358
SchI GAGTC 2 cut(s) 484, 557
ScrFI CCNGG 7 cut(s) 35, 48, 168, 242, 285, 438, 474
SduI GDGCHC 4 cut(s) 48, 213, 353, 505
SetI ASST 6 cut(s) 36, 131, 190, 221, 323, 402
SfaNI GCATC 1 cut(s) 583
Sfr274I CTCGAG 2 cut(s) 339, 395
Sfr303I CCGCGG 1 cut(s) 410
SgrBI CCGCGG 1 cut(s) 410
SinI GGWCC 3 cut(s) 193, 265, 358
SlaI CTCGAG 2 cut(s) 339, 395
SmlI CTYRAG 3 cut(s) 339, 395, 569
SmoI CTYRAG 3 cut(s) 339, 395, 569
Sse9I AATT 1 cut(s) 524
SspI AATATT 1 cut(s) 92
SspMI CTAG 4 cut(s) 608, 638, 696, 748
StyD4I CCNGG 7 cut(s) 33, 46, 166, 240, 283, 436, 472
StyI CCWWGG 5 cut(s) 602, 664, 686, 721, 742
TaaI ACNGT 2 cut(s) 486, 500
TaiI ACGT 1 cut(s) 221
TaqI TCGA 3 cut(s) 340, 396, 488
TaqII GACCGA 1 cut(s) 282
TasI AATT 1 cut(s) 524
TauI GCSGC 6 cut(s) 19, 59, 202, 248, 412, 428
Tru1I TTAA 1 cut(s) 570
Tru9I TTAA 1 cut(s) 570
TseI GCWGC 2 cut(s) 25, 400
TspGWI ACGGA 2 cut(s) 304, 458
Van91I CCANNNNNTGG 1 cut(s) 202
Vha464I CTTAAG 1 cut(s) 569
VpaK11BI GGWCC 3 cut(s) 193, 265, 358
XagI CCTNNNNNAGG 1 cut(s) 641
XapI RAATTY 1 cut(s) 524
XhoI CTCGAG 2 cut(s) 339, 395
XmiI GTMKAC 1 cut(s) 488
XmnI GAANNNNTTC 1 cut(s) 524
XspI CTAG 4 cut(s) 608, 638, 696, 748
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.