Rroxscaffold_49G00438710

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000049
OG0000104
Physical Location & Seq
Forward (+)
96040 .. 99191
3152 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_49G00438710.1

Sequence Viewer

Length: 753 bp
ATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCTGGTAACGGCCTGCGGGCTCCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGATTAAACCCGTAAGGCGCAAGGAAGCTAATGTGCGGGATCCCTTTGCGGGTGCACCGCCGACCGACCTTGATCTTCCGAGAAGGGTTCGAGACGGCGTGGCTGCTTTGTTGAGCCACGCCAAGGAATCGAGAGCTCCAAGTGGGCCATTTTTGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGCCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACCGGGAACGCTCCTTCGGGGCTTTCCCCGGGCGTTCAACAGTCGACTCAGAACTGACGCTTCCTAACGAATGCGATGCCAAGCCAAGGCTAGGCAATGCCGTGGCCGACAGAGGCTTCCTAGCGAAGGATAATGCAATGCCGAGCCAAGGCTTTGCCAAGACAATGCCAAGGCTTGCTAGTGAGGCTAATGCAATGTCAAGCCAAGGCTTGCCAAGACAATGCCAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

250

Amino Acids

27.04

Weight (kDa)

11.48

Isoelectric Point (pI)

53.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 103
AccB7I CCANNNNNTGG 1 cut(s) 331
AccBSI CCGCTC 1 cut(s) 492
AccI GTMKAC 1 cut(s) 564
AccII CGCG 3 cut(s) 352, 483, 502
AclWI GGATC 4 cut(s) 164, 177, 379, 392
AcoI YGGCCR 2 cut(s) 508, 624
AflIII ACRYGT 1 cut(s) 111
AgsI TTSAA 2 cut(s) 89, 558
AjiI CACGTC 1 cut(s) 348
AjnI CCWGG 2 cut(s) 49, 295
AluBI AGCT 3 cut(s) 158, 266, 474
AluI AGCT 3 cut(s) 158, 266, 474
Alw21I GWGCWC 4 cut(s) 49, 187, 268, 342
Alw26I GTCTC 2 cut(s) 26, 216
Alw44I GTGCAC 1 cut(s) 183
AlwI GGATC 4 cut(s) 164, 177, 379, 392
AlwNI CAGNNNCTG 1 cut(s) 331
Ama87I CYCGRG 3 cut(s) 395, 469, 548
AoxI GGCC 5 cut(s) 58, 78, 275, 508, 624
ApaLI GTGCAC 1 cut(s) 183
ApeKI GCWGC 3 cut(s) 9, 233, 474
AspLEI GCGC 2 cut(s) 18, 150
AspS9I GGNCC 6 cut(s) 79, 96, 275, 322, 432, 520
AsuC2I CCSGG 4 cut(s) 512, 524, 549, 550
AsuHPI GGTGA 2 cut(s) 142, 472
AvaI CYCGRG 3 cut(s) 395, 469, 548
AvaII GGWCC 4 cut(s) 96, 322, 432, 520
BaeGI GKGCMC 2 cut(s) 187, 427
BamHI GGATCC 2 cut(s) 169, 384
BanII GRGCYC 2 cut(s) 70, 268
Bbv12I GWGCWC 4 cut(s) 49, 187, 268, 342
BbvI GCAGC 3 cut(s) 21, 220, 461
BceAI ACGGC 5 cut(s) 3, 73, 241, 319, 605
BcgI CGANNNNNNTGC 2 cut(s) 578, 612
BciT130I CCWGG 2 cut(s) 51, 297
BcnI CCSGG 4 cut(s) 512, 524, 549, 550
BcoDI GTCTC 2 cut(s) 26, 216
BfaI CTAG 4 cut(s) 611, 641, 699, 751
BglI GCCNNNNNGGC 1 cut(s) 24
BisI GCNGC 6 cut(s) 10, 234, 329, 475, 484, 500
BlpI GCTNAGC 1 cut(s) 307
BlsI GCNGC 6 cut(s) 11, 235, 330, 476, 485, 501
Bme1390I CCNGG 6 cut(s) 51, 297, 512, 524, 549, 550
Bme18I GGWCC 4 cut(s) 96, 322, 432, 520
BmeT110I CYCGRG 3 cut(s) 395, 469, 548
BmgBI CACGTC 1 cut(s) 348
BmgT120I GGNCC 6 cut(s) 79, 96, 275, 322, 432, 520
BmiI GGNNCC 6 cut(s) 69, 171, 323, 386, 433, 434
BmrFI CCNGG 6 cut(s) 51, 297, 512, 524, 549, 550
BmsI GCATC 2 cut(s) 46, 586
Bpu1102I GCTNAGC 1 cut(s) 307
BpuMI CCSGG 4 cut(s) 512, 524, 549, 550
BsaXI ACNNNNNCTCC 2 cut(s) 306, 336
Bse118I RCCGGY 1 cut(s) 506
Bse3DI GCAATG 3 cut(s) 622, 663, 720
BseBI CCWGG 2 cut(s) 51, 297
BseMI GCAATG 3 cut(s) 622, 663, 720
BseMII CTCAG 3 cut(s) 321, 405, 582
BseSI GKGCMC 2 cut(s) 187, 427
BseX3I CGGCCG 1 cut(s) 508
BseXI GCAGC 3 cut(s) 21, 220, 461
BseYI CCCAGC 2 cut(s) 420, 435
Bsh1236I CGCG 3 cut(s) 352, 483, 502
Bsh1285I CGRYCG 2 cut(s) 195, 511
BshFI GGCC 5 cut(s) 60, 80, 277, 510, 626
BsiEI CGRYCG 2 cut(s) 195, 511
BsiHKAI GWGCWC 4 cut(s) 49, 187, 268, 342
BsiHKCI CYCGRG 3 cut(s) 395, 469, 548
BsiSI CCGG 6 cut(s) 312, 361, 507, 511, 523, 549
BslFI GGGAC 2 cut(s) 418, 529
BsmAI GTCTC 2 cut(s) 26, 216
BsmBI CGTCTC 2 cut(s) 26, 216
BsmFI GGGAC 2 cut(s) 418, 529
BsmI GAATGC 1 cut(s) 596
BsnI GGCC 5 cut(s) 60, 80, 277, 510, 626
BsoBI CYCGRG 3 cut(s) 395, 469, 548
Bsp1286I GDGCHC 6 cut(s) 49, 70, 187, 268, 342, 427
Bsp143I GATC 3 cut(s) 169, 202, 384
Bsp1720I GCTNAGC 1 cut(s) 307
BspANI GGCC 5 cut(s) 60, 80, 277, 510, 626
BspCNI CTCAG 3 cut(s) 320, 406, 581
BspFNI CGCG 3 cut(s) 352, 483, 502
BspLI GGNNCC 6 cut(s) 69, 171, 323, 386, 433, 434
BspPI GGATC 4 cut(s) 164, 177, 379, 392
BspQI GCTCTTC 1 cut(s) 330
BsrBI CCGCTC 1 cut(s) 492
BsrDI GCAATG 3 cut(s) 622, 663, 720
BsrFI RCCGGY 1 cut(s) 506
BssAI RCCGGY 1 cut(s) 506
BssMI GATC 3 cut(s) 169, 202, 384
BssT1I CCWWGG 7 cut(s) 99, 252, 605, 667, 689, 724, 745
Bst2UI CCWGG 2 cut(s) 51, 297
Bst4CI ACNGT 1 cut(s) 562
Bst6I CTCTTC 1 cut(s) 330
BstDEI CTNAG 3 cut(s) 307, 414, 568
BstDSI CCRYGG 2 cut(s) 481, 621
BstENI CCTNNNNNAGG 1 cut(s) 644
BstFNI CGCG 3 cut(s) 352, 483, 502
BstHHI GCGC 2 cut(s) 18, 150
BstKTI GATC 3 cut(s) 172, 205, 387
BstMAI GTCTC 2 cut(s) 26, 216
BstMBI GATC 3 cut(s) 169, 202, 384
BstMCI CGRYCG 2 cut(s) 195, 511
BstNI CCWGG 2 cut(s) 51, 297
BstNSI RCATGY 2 cut(s) 16, 115
BstSCI CCNGG 6 cut(s) 49, 295, 510, 522, 547, 548
BstSLI GKGCMC 2 cut(s) 187, 427
BstUI CGCG 3 cut(s) 352, 483, 502
BstV1I GCAGC 3 cut(s) 21, 220, 461
BstX2I RGATCY 2 cut(s) 169, 384
BstYI RGATCY 2 cut(s) 169, 384
BstZI CGGCCG 1 cut(s) 508
BsuRI GGCC 5 cut(s) 60, 80, 277, 510, 626
BtgI CCRYGG 2 cut(s) 481, 621
BtgZI GCGATG 1 cut(s) 609
BtrI CACGTC 1 cut(s) 348
CaiI CAGNNNCTG 1 cut(s) 331
CfoI GCGC 2 cut(s) 18, 150
Cfr10I RCCGGY 1 cut(s) 506
Cfr13I GGNCC 6 cut(s) 79, 96, 275, 322, 432, 520
Cfr42I CCGCGG 1 cut(s) 484
Cfr9I CCCGGG 1 cut(s) 548
CpoI CGGWCCG 1 cut(s) 520
CseI GACGC 1 cut(s) 586
CspI CGGWCCG 1 cut(s) 520
CviAII CATG 2 cut(s) 13, 112
DdeI CTNAG 3 cut(s) 307, 414, 568
DpnI GATC 3 cut(s) 171, 204, 386
DpnII GATC 3 cut(s) 169, 202, 384
DrdI GACNNNNNNGTC 1 cut(s) 103
DseDI GACNNNNNNGTC 1 cut(s) 103
EaeI YGGCCR 2 cut(s) 508, 624
EagI CGGCCG 1 cut(s) 508
Eam1104I CTCTTC 1 cut(s) 330
EarI CTCTTC 1 cut(s) 330
Ecl136II GAGCTC 1 cut(s) 266
EclXI CGGCCG 1 cut(s) 508
Eco130I CCWWGG 7 cut(s) 99, 252, 605, 667, 689, 724, 745
Eco24I GRGCYC 2 cut(s) 70, 268
Eco47I GGWCC 4 cut(s) 96, 322, 432, 520
Eco52I CGGCCG 1 cut(s) 508
Eco53kI GAGCTC 1 cut(s) 266
Eco88I CYCGRG 3 cut(s) 395, 469, 548
EcoICRI GAGCTC 1 cut(s) 266
EcoNI CCTNNNNNAGG 1 cut(s) 644
EcoO109I RGGNCCY 1 cut(s) 432
EcoRII CCWGG 2 cut(s) 49, 295
EcoT14I CCWWGG 7 cut(s) 99, 252, 605, 667, 689, 724, 745
EcoT38I GRGCYC 2 cut(s) 70, 268
ErhI CCWWGG 7 cut(s) 99, 252, 605, 667, 689, 724, 745
Esp3I CGTCTC 2 cut(s) 26, 216
FaeI CATG 2 cut(s) 16, 115
FaiI YATR 2 cut(s) 14, 113
FaqI GGGAC 2 cut(s) 418, 529
FatI CATG 2 cut(s) 12, 111
FauI CCCGC 4 cut(s) 57, 159, 172, 485
FblI GTMKAC 1 cut(s) 564
Fnu4HI GCNGC 6 cut(s) 10, 234, 329, 475, 484, 500
FriOI GRGCYC 2 cut(s) 70, 268
Fsp4HI GCNGC 6 cut(s) 10, 234, 329, 475, 484, 500
FspBI CTAG 4 cut(s) 611, 641, 699, 751
GlaI GCGC 2 cut(s) 17, 149
GluI GCNGC 6 cut(s) 10, 234, 329, 475, 484, 500
GsaI CCCAGC 2 cut(s) 424, 439
HaeIII GGCC 5 cut(s) 60, 80, 277, 510, 626
HapII CCGG 6 cut(s) 312, 361, 507, 511, 523, 549
HgaI GACGC 1 cut(s) 586
HhaI GCGC 2 cut(s) 18, 150
Hin1II CATG 2 cut(s) 16, 115
Hin6I GCGC 2 cut(s) 16, 148
HinP1I GCGC 2 cut(s) 16, 148
HincII GTYRAC 2 cut(s) 125, 565
HindII GTYRAC 2 cut(s) 125, 565
HinfI GANTC 4 cut(s) 104, 121, 257, 566
HpaII CCGG 6 cut(s) 312, 361, 507, 511, 523, 549
HphI GGTGA 2 cut(s) 142, 472
Hpy166II GTNNAC 4 cut(s) 125, 185, 463, 565
Hpy188I TCNGA 4 cut(s) 109, 210, 415, 571
Hpy188III TCNNGA 4 cut(s) 86, 221, 261, 397
Hpy8I GTNNAC 4 cut(s) 125, 185, 463, 565
Hpy99I CGWCG 2 cut(s) 352, 453
HpyAV CCTTC 3 cut(s) 207, 544, 640
HpyCH4III ACNGT 1 cut(s) 562
HpyCH4IV ACGT 1 cut(s) 347
HpyCH4V TGCA 3 cut(s) 185, 656, 713
HpyF3I CTNAG 3 cut(s) 307, 414, 568
HpySE526I ACGT 1 cut(s) 347
Hsp92II CATG 2 cut(s) 16, 115
HspAI GCGC 2 cut(s) 16, 148
KflI GGGWCCC 1 cut(s) 432
KroI GCCGGC 1 cut(s) 506
KroNI GCCGGC 1 cut(s) 508
KspI CCGCGG 1 cut(s) 484
Kzo9I GATC 3 cut(s) 169, 202, 384
LguI GCTCTTC 1 cut(s) 330
LmnI GCTCC 4 cut(s) 52, 73, 271, 536
Lsp1109I GCAGC 3 cut(s) 21, 220, 461
LweI GCATC 2 cut(s) 46, 586
MaeI CTAG 4 cut(s) 611, 641, 699, 751
MaeII ACGT 1 cut(s) 347
MaeIII GTNAC 2 cut(s) 53, 389
MalI GATC 3 cut(s) 171, 204, 386
MbiI CCGCTC 1 cut(s) 492
MboI GATC 3 cut(s) 169, 202, 384
MboII GAAGA 2 cut(s) 197, 347
MflI RGATCY 2 cut(s) 169, 384
MhlI GDGCHC 6 cut(s) 49, 70, 187, 268, 342, 427
MlyI GAGTC 3 cut(s) 113, 130, 560
MnlI CCTC 5 cut(s) 308, 404, 409, 626, 697
MroNI GCCGGC 1 cut(s) 506
MseI TTAA 1 cut(s) 135
MslI CAYNNNNRTG 1 cut(s) 42
MspA1I CMGCKG 2 cut(s) 328, 483
MspI CCGG 6 cut(s) 312, 361, 507, 511, 523, 549
MspR9I CCNGG 6 cut(s) 51, 297, 512, 524, 549, 550
Mva1269I GAATGC 1 cut(s) 596
MvaI CCWGG 2 cut(s) 51, 297
MvnI CGCG 3 cut(s) 352, 483, 502
NaeI GCCGGC 1 cut(s) 508
NciI CCSGG 4 cut(s) 512, 524, 549, 550
NdeII GATC 3 cut(s) 169, 202, 384
NgoMIV GCCGGC 1 cut(s) 506
NlaIII CATG 2 cut(s) 16, 115
NlaIV GGNNCC 6 cut(s) 69, 171, 323, 386, 433, 434
NmeAIII GCCGAG 1 cut(s) 687
NspI RCATGY 2 cut(s) 16, 115
PaeI GCATGC 1 cut(s) 16
PaeR7I CTCGAG 1 cut(s) 469
PciI ACATGT 1 cut(s) 111
PciSI GCTCTTC 1 cut(s) 330
PcsI WCGNNNNNNNCGW 1 cut(s) 40
PctI GAATGC 1 cut(s) 596
PdiI GCCGGC 1 cut(s) 508
PfeI GAWTC 1 cut(s) 257
PflMI CCANNNNNTGG 1 cut(s) 331
PkrI GCNGC 6 cut(s) 11, 235, 330, 476, 485, 501
PleI GAGTC 3 cut(s) 112, 129, 560
PpsI GAGTC 3 cut(s) 112, 129, 560
PpuMI RGGWCCY 1 cut(s) 432
PscI ACATGT 1 cut(s) 111
Psp124BI GAGCTC 1 cut(s) 268
Psp5II RGGWCCY 1 cut(s) 432
Psp6I CCWGG 2 cut(s) 49, 295
PspFI CCCAGC 2 cut(s) 420, 435
PspGI CCWGG 2 cut(s) 49, 295
PspN4I GGNNCC 6 cut(s) 69, 171, 323, 386, 433, 434
PspPI GGNCC 6 cut(s) 79, 96, 275, 322, 432, 520
PspPPI RGGWCCY 1 cut(s) 432
PspXI VCTCGAGB 1 cut(s) 469
PstNI CAGNNNCTG 1 cut(s) 331
PsuI RGATCY 2 cut(s) 169, 384
RseI CAYNNNNRTG 1 cut(s) 42
Rsr2I CGGWCCG 1 cut(s) 520
RsrII CGGWCCG 1 cut(s) 520
SacI GAGCTC 1 cut(s) 268
SacII CCGCGG 1 cut(s) 484
SalI GTCGAC 1 cut(s) 563
SapI GCTCTTC 1 cut(s) 330
SaqAI TTAA 1 cut(s) 135
SatI GCNGC 6 cut(s) 10, 234, 329, 475, 484, 500
Sau3AI GATC 3 cut(s) 169, 202, 384
Sau96I GGNCC 6 cut(s) 79, 96, 275, 322, 432, 520
SchI GAGTC 3 cut(s) 113, 130, 560
ScrFI CCNGG 6 cut(s) 51, 297, 512, 524, 549, 550
SduI GDGCHC 6 cut(s) 49, 70, 187, 268, 342, 427
SetI ASST 7 cut(s) 160, 201, 268, 319, 350, 396, 476
SfaNI GCATC 2 cut(s) 46, 586
Sfr274I CTCGAG 1 cut(s) 469
Sfr303I CCGCGG 1 cut(s) 484
SgrBI CCGCGG 1 cut(s) 484
SinI GGWCC 4 cut(s) 96, 322, 432, 520
SlaI CTCGAG 1 cut(s) 469
SmaI CCCGGG 1 cut(s) 550
SmiMI CAYNNNNRTG 1 cut(s) 42
SmlI CTYRAG 1 cut(s) 469
SmoI CTYRAG 1 cut(s) 469
SphI GCATGC 1 cut(s) 16
SspMI CTAG 4 cut(s) 611, 641, 699, 751
SstI GAGCTC 1 cut(s) 268
StyD4I CCNGG 6 cut(s) 49, 295, 510, 522, 547, 548
StyI CCWWGG 7 cut(s) 99, 252, 605, 667, 689, 724, 745
TaaI ACNGT 1 cut(s) 562
TaiI ACGT 1 cut(s) 350
TaqI TCGA 4 cut(s) 220, 260, 470, 564
TaqII GACCGA 1 cut(s) 209
TauI GCSGC 3 cut(s) 331, 486, 502
TfiI GAWTC 1 cut(s) 257
Tru1I TTAA 1 cut(s) 135
Tru9I TTAA 1 cut(s) 135
TseI GCWGC 3 cut(s) 9, 233, 474
TspGWI ACGGA 3 cut(s) 109, 377, 533
TspMI CCCGGG 1 cut(s) 548
Van91I CCANNNNNTGG 1 cut(s) 331
VneI GTGCAC 1 cut(s) 183
VpaK11BI GGWCC 4 cut(s) 96, 322, 432, 520
XagI CCTNNNNNAGG 1 cut(s) 644
XceI RCATGY 2 cut(s) 16, 115
XhoI CTCGAG 1 cut(s) 469
XmaI CCCGGG 1 cut(s) 548
XmiI GTMKAC 1 cut(s) 564
XspI CTAG 4 cut(s) 611, 641, 699, 751
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.