Rroxscaffold_97G00442330

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000097
OG0000104
Physical Location & Seq
Reverse (-)
21160 .. 26014
4855 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_97G00442330.1

Sequence Viewer

Length: 1314 bp
ATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCGGCCTGCTAACTAGCTATGCGGAGGTCTCCTCCGCGGCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAAGGAAGTTTGAGGCAATAACAGCGGATGGGGGCGGCGATGCGCCTCGGTCGGATGTGGAACGGTCACAAGCCGGTCCGCCACTCGACTCGGGGCGTGGACCGTTACGGATTGCGGCGGCGGCCAAAGCCGGGCTGTTGATATGCCGTGGAGACGTCGTCGACGCGATCATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCTGCTAATGTGCGGGATCCCTTTGCGGGTGCACCGCCGACCGACCTTGATCTTCGAGAAGGGTTCGAGTGTGAGCATGCTGTCGGGACCCGAAAGATGGTGAACTATGCCGAGCGGGGCGAAGCCAGAGGAAACTCGGTGGAGGCCCGCAGCGATGCTGACGTGCAAATCGACGGCGTGGCTGCTTTGTTGAGCCACGCCAAGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGGAGTCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCGGCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGGCTGGGCACGGGGGTCCCGATCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCGGGCGTTCAACGGTCGACTCGGAACTGGCCAGTCTCTCACACAATATGTTTTGCTCGACCTGCTTGGCACTTGACGGTCATCTCGGACTGCGCTTGGCCTTGCCGACGGACGCTTCCTAACGAATGCGATGCCAAGCCAAGGCTAGGCAATGCGTGGGCTGACAGAGGCTTCCTAGCGAAGGATAATGCAATGCCGAGCCAAGGCTTTGCCAAGACAATGCCAAGGCTTGCTAGTGAGGCTAATGCAATGTCAAGCCAAGGCTTGCCAAGACAATGCCAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

437

Amino Acids

46.74

Weight (kDa)

9.14

Isoelectric Point (pI)

50.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 303, 612
Acc36I ACCTGC 1 cut(s) 1096
AccB7I CCANNNNNTGG 1 cut(s) 697
AccBSI CCGCTC 2 cut(s) 478, 973
AccI GTMKAC 2 cut(s) 306, 1043
AccII CGCG 5 cut(s) 110, 311, 718, 964, 983
AccIII TCCGGA 1 cut(s) 754
AclWI GGATC 5 cut(s) 374, 387, 859, 872, 913
AcoI YGGCCR 6 cut(s) 17, 111, 134, 267, 989, 1055
AcyI GRCGYC 2 cut(s) 300, 609
AfaI GTAC 1 cut(s) 786
AgsI TTSAA 2 cut(s) 749, 1037
AjiI CACGTC 2 cut(s) 526, 714
AjnI CCWGG 1 cut(s) 662
AluBI AGCT 4 cut(s) 90, 117, 578, 955
AluI AGCT 4 cut(s) 90, 117, 578, 955
Alw21I GWGCWC 4 cut(s) 364, 397, 580, 708
Alw26I GTCTC 7 cut(s) 63, 106, 291, 341, 600, 809, 1066
Alw44I GTGCAC 1 cut(s) 393
AlwI GGATC 5 cut(s) 374, 387, 859, 872, 913
AlwNI CAGNNNCTG 1 cut(s) 697
Ama87I CYCGRG 4 cut(s) 235, 623, 875, 950
Aor13HI TCCGGA 1 cut(s) 754
ApaLI GTGCAC 1 cut(s) 393
ApeKI GCWGC 5 cut(s) 324, 513, 545, 891, 955
AspLEI GCGC 4 cut(s) 190, 333, 734, 1121
AsuC2I CCSGG 4 cut(s) 277, 737, 993, 1029
AsuHPI GGTGA 3 cut(s) 475, 824, 953
AvaI CYCGRG 4 cut(s) 235, 623, 875, 950
AvaII GGWCC 6 cut(s) 221, 245, 450, 688, 760, 913
BaeGI GKGCMC 2 cut(s) 397, 908
BalI TGGCCA 1 cut(s) 1057
BamHI GGATCC 2 cut(s) 379, 864
BanII GRGCYC 1 cut(s) 580
Bbv12I GWGCWC 4 cut(s) 364, 397, 580, 708
BbvI GCAGC 5 cut(s) 336, 525, 532, 878, 942
BccI CCATC 2 cut(s) 167, 454
BceAI ACGGC 5 cut(s) 4, 276, 318, 553, 686
BcgI CGANNNNNNTGC 2 cut(s) 1139, 1173
BciT130I CCWGG 1 cut(s) 664
BcnI CCSGG 4 cut(s) 277, 737, 993, 1029
BcoDI GTCTC 7 cut(s) 63, 106, 291, 341, 600, 809, 1066
BfaI CTAG 5 cut(s) 87, 1172, 1202, 1260, 1312
BfuAI ACCTGC 1 cut(s) 1096
BglI GCCNNNNNGGC 3 cut(s) 142, 339, 740
Bme1390I CCNGG 5 cut(s) 277, 664, 737, 993, 1029
Bme18I GGWCC 6 cut(s) 221, 245, 450, 688, 760, 913
BmeT110I CYCGRG 4 cut(s) 235, 623, 875, 950
BmgBI CACGTC 2 cut(s) 526, 714
BmiI GGNNCC 8 cut(s) 381, 451, 452, 620, 689, 866, 914, 915
BmrFI CCNGG 5 cut(s) 277, 664, 737, 993, 1029
BmrI ACTGGG 1 cut(s) 1012
BmsI GCATC 5 cut(s) 175, 361, 508, 806, 1147
BmuI ACTGGG 1 cut(s) 1012
BplI GAGNNNNNCTC 2 cut(s) 89, 121
Bpu10I CCTNAGC 1 cut(s) 140
BpuMI CCSGG 4 cut(s) 277, 737, 993, 1029
BsaHI GRCGYC 2 cut(s) 300, 609
BsaI GGTCTC 3 cut(s) 63, 106, 809
BsaWI WCCGGW 2 cut(s) 726, 754
BsaXI ACNNNNNCTCC 4 cut(s) 288, 318, 672, 702
Bse118I RCCGGY 3 cut(s) 218, 778, 987
Bse1I ACTGG 3 cut(s) 1007, 1058, 1058
Bse3DI GCAATG 3 cut(s) 1183, 1224, 1281
BseAI TCCGGA 1 cut(s) 754
BseBI CCWGG 1 cut(s) 664
BseGI GGATG 2 cut(s) 178, 205
BseMI GCAATG 3 cut(s) 1183, 1224, 1281
BseNI ACTGG 3 cut(s) 1007, 1058, 1058
BseRI GAGGAG 1 cut(s) 94
BseSI GKGCMC 2 cut(s) 397, 908
BseX3I CGGCCG 1 cut(s) 989
BseXI GCAGC 5 cut(s) 336, 525, 532, 878, 942
BseYI CCCAGC 1 cut(s) 901
Bsh1236I CGCG 5 cut(s) 110, 311, 718, 964, 983
Bsh1285I CGRYCG 5 cut(s) 197, 405, 783, 992, 1043
BsiEI CGRYCG 5 cut(s) 197, 405, 783, 992, 1043
BsiHKAI GWGCWC 4 cut(s) 364, 397, 580, 708
BsiHKCI CYCGRG 4 cut(s) 235, 623, 875, 950
BsiSI CCGG 9 cut(s) 219, 276, 727, 737, 755, 779, 988, 992, 1028
BslFI GGGAC 4 cut(s) 141, 463, 899, 1009
BsmAI GTCTC 7 cut(s) 63, 106, 291, 341, 600, 809, 1066
BsmBI CGTCTC 3 cut(s) 291, 341, 600
BsmFI GGGAC 4 cut(s) 141, 463, 899, 1009
BsmI GAATGC 1 cut(s) 1157
Bso31I GGTCTC 3 cut(s) 63, 106, 809
BsoBI CYCGRG 4 cut(s) 235, 623, 875, 950
Bsp1286I GDGCHC 5 cut(s) 364, 397, 580, 708, 908
Bsp13I TCCGGA 1 cut(s) 754
Bsp143I GATC 5 cut(s) 312, 379, 412, 864, 918
BspEI TCCGGA 1 cut(s) 754
BspFNI CGCG 5 cut(s) 110, 311, 718, 964, 983
BspLI GGNNCC 8 cut(s) 381, 451, 452, 620, 689, 866, 914, 915
BspMI ACCTGC 1 cut(s) 1096
BspPI GGATC 5 cut(s) 374, 387, 859, 872, 913
BspQI GCTCTTC 1 cut(s) 696
BspTNI GGTCTC 3 cut(s) 63, 106, 809
BsrBI CCGCTC 2 cut(s) 478, 973
BsrDI GCAATG 3 cut(s) 1183, 1224, 1281
BsrFI RCCGGY 3 cut(s) 218, 778, 987
BsrI ACTGG 3 cut(s) 1007, 1058, 1058
BssAI RCCGGY 3 cut(s) 218, 778, 987
BssMI GATC 5 cut(s) 312, 379, 412, 864, 918
BssNI GRCGYC 2 cut(s) 300, 609
BssT1I CCWWGG 8 cut(s) 146, 564, 808, 1166, 1228, 1250, 1285, 1306
Bst2UI CCWGG 1 cut(s) 664
Bst4CI ACNGT 4 cut(s) 210, 249, 1041, 1105
Bst6I CTCTTC 2 cut(s) 623, 696
BstACI GRCGYC 2 cut(s) 300, 609
BstDEI CTNAG 3 cut(s) 25, 121, 140
BstDSI CCRYGG 3 cut(s) 108, 292, 962
BstENI CCTNNNNNAGG 1 cut(s) 1205
BstF5I GGATG 2 cut(s) 178, 205
BstFNI CGCG 5 cut(s) 110, 311, 718, 964, 983
BstHHI GCGC 4 cut(s) 190, 333, 734, 1121
BstKTI GATC 5 cut(s) 315, 382, 415, 867, 921
BstMAI GTCTC 7 cut(s) 63, 106, 291, 341, 600, 809, 1066
BstMBI GATC 5 cut(s) 312, 379, 412, 864, 918
BstMCI CGRYCG 5 cut(s) 197, 405, 783, 992, 1043
BstNI CCWGG 1 cut(s) 664
BstNSI RCATGY 2 cut(s) 331, 443
BstSCI CCNGG 5 cut(s) 275, 662, 735, 991, 1027
BstSLI GKGCMC 2 cut(s) 397, 908
BstUI CGCG 5 cut(s) 110, 311, 718, 964, 983
BstV1I GCAGC 5 cut(s) 336, 525, 532, 878, 942
BstX2I RGATCY 2 cut(s) 379, 864
BstYI RGATCY 2 cut(s) 379, 864
BstZI CGGCCG 1 cut(s) 989
BtgI CCRYGG 3 cut(s) 108, 292, 962
BtgZI GCGATG 3 cut(s) 198, 531, 1170
BtrI CACGTC 2 cut(s) 526, 714
BtsCI GGATG 2 cut(s) 178, 205
BveI ACCTGC 1 cut(s) 1096
CaiI CAGNNNCTG 1 cut(s) 697
CfoI GCGC 4 cut(s) 190, 333, 734, 1121
Cfr10I RCCGGY 3 cut(s) 218, 778, 987
Cfr42I CCGCGG 2 cut(s) 111, 965
CpoI CGGWCCG 1 cut(s) 221
CseI GACGC 2 cut(s) 317, 1147
Csp6I GTAC 1 cut(s) 785
CspI CGGWCCG 1 cut(s) 221
CviAII CATG 4 cut(s) 15, 316, 328, 440
CviQI GTAC 1 cut(s) 785
DdeI CTNAG 3 cut(s) 25, 121, 140
DpnI GATC 5 cut(s) 314, 381, 414, 866, 920
DpnII GATC 5 cut(s) 312, 379, 412, 864, 918
EaeI YGGCCR 6 cut(s) 17, 111, 134, 267, 989, 1055
EagI CGGCCG 1 cut(s) 989
Eam1104I CTCTTC 2 cut(s) 623, 696
EarI CTCTTC 2 cut(s) 623, 696
EciI GGCGGA 2 cut(s) 213, 693
Ecl136II GAGCTC 1 cut(s) 578
EclXI CGGCCG 1 cut(s) 989
Eco130I CCWWGG 8 cut(s) 146, 564, 808, 1166, 1228, 1250, 1285, 1306
Eco24I GRGCYC 1 cut(s) 580
Eco31I GGTCTC 3 cut(s) 63, 106, 809
Eco47I GGWCC 6 cut(s) 221, 245, 450, 688, 760, 913
Eco52I CGGCCG 1 cut(s) 989
Eco53kI GAGCTC 1 cut(s) 578
Eco88I CYCGRG 4 cut(s) 235, 623, 875, 950
EcoICRI GAGCTC 1 cut(s) 578
EcoNI CCTNNNNNAGG 1 cut(s) 1205
EcoO109I RGGNCCY 3 cut(s) 450, 619, 913
EcoRII CCWGG 1 cut(s) 662
EcoT14I CCWWGG 8 cut(s) 146, 564, 808, 1166, 1228, 1250, 1285, 1306
EcoT38I GRGCYC 1 cut(s) 580
ErhI CCWWGG 8 cut(s) 146, 564, 808, 1166, 1228, 1250, 1285, 1306
Esp3I CGTCTC 3 cut(s) 291, 341, 600
FaeI CATG 4 cut(s) 18, 319, 331, 443
FaqI GGGAC 4 cut(s) 141, 463, 899, 1009
FatI CATG 4 cut(s) 14, 315, 327, 439
FauI CCCGC 6 cut(s) 369, 382, 471, 518, 608, 966
FblI GTMKAC 2 cut(s) 306, 1043
FokI GGATG 2 cut(s) 185, 212
FriOI GRGCYC 1 cut(s) 580
FspBI CTAG 5 cut(s) 87, 1172, 1202, 1260, 1312
GlaI GCGC 4 cut(s) 189, 332, 733, 1120
GsaI CCCAGC 1 cut(s) 905
HapII CCGG 9 cut(s) 219, 276, 727, 737, 755, 779, 988, 992, 1028
HgaI GACGC 2 cut(s) 317, 1147
HhaI GCGC 4 cut(s) 190, 333, 734, 1121
Hin1I GRCGYC 2 cut(s) 300, 609
Hin1II CATG 4 cut(s) 18, 319, 331, 443
Hin6I GCGC 4 cut(s) 188, 331, 732, 1119
HinP1I GCGC 4 cut(s) 188, 331, 732, 1119
HincII GTYRAC 3 cut(s) 61, 307, 1044
HindII GTYRAC 3 cut(s) 61, 307, 1044
HinfI GANTC 4 cut(s) 233, 569, 600, 1045
HpaI GTTAAC 1 cut(s) 61
HpaII CCGG 9 cut(s) 219, 276, 727, 737, 755, 779, 988, 992, 1028
HphI GGTGA 3 cut(s) 475, 824, 953
Hpy166II GTNNAC 8 cut(s) 61, 245, 307, 395, 466, 815, 944, 1044
Hpy188I TCNGA 4 cut(s) 199, 605, 1050, 1114
Hpy188III TCNNGA 8 cut(s) 419, 448, 573, 625, 755, 877, 916, 922
Hpy8I GTNNAC 8 cut(s) 61, 245, 307, 395, 466, 815, 944, 1044
Hpy99I CGWCG 8 cut(s) 305, 308, 311, 539, 614, 718, 934, 1137
HpyAV CCTTC 3 cut(s) 416, 1024, 1201
HpyCH4III ACNGT 4 cut(s) 210, 249, 1041, 1105
HpyCH4IV ACGT 4 cut(s) 300, 525, 609, 713
HpyCH4V TGCA 5 cut(s) 14, 395, 529, 1217, 1274
HpyF3I CTNAG 3 cut(s) 25, 121, 140
HpySE526I ACGT 4 cut(s) 300, 525, 609, 713
Hsp92I GRCGYC 2 cut(s) 300, 609
Hsp92II CATG 4 cut(s) 18, 319, 331, 443
HspAI GCGC 4 cut(s) 188, 331, 732, 1119
KflI GGGWCCC 2 cut(s) 450, 913
Kpn2I TCCGGA 1 cut(s) 754
KroI GCCGGC 1 cut(s) 987
KroNI GCCGGC 1 cut(s) 989
KspAI GTTAAC 1 cut(s) 61
KspI CCGCGG 2 cut(s) 111, 965
Kzo9I GATC 5 cut(s) 312, 379, 412, 864, 918
LguI GCTCTTC 1 cut(s) 696
LmnI GCTCC 4 cut(s) 35, 367, 583, 1016
Lsp1109I GCAGC 5 cut(s) 336, 525, 532, 878, 942
LweI GCATC 5 cut(s) 175, 361, 508, 806, 1147
MaeI CTAG 5 cut(s) 87, 1172, 1202, 1260, 1312
MaeII ACGT 4 cut(s) 300, 525, 609, 713
MaeIII GTNAC 3 cut(s) 210, 249, 869
MalI GATC 5 cut(s) 314, 381, 414, 866, 920
MbiI CCGCTC 2 cut(s) 478, 973
MboI GATC 5 cut(s) 312, 379, 412, 864, 918
MboII GAAGA 3 cut(s) 407, 640, 713
MflI RGATCY 2 cut(s) 379, 864
MhlI GDGCHC 5 cut(s) 364, 397, 580, 708, 908
MlsI TGGCCA 1 cut(s) 1057
MluCI AATT 1 cut(s) 52
MluNI TGGCCA 1 cut(s) 1057
MlyI GAGTC 3 cut(s) 227, 609, 1039
MmeI TCCRAC 2 cut(s) 177, 583
Mox20I TGGCCA 1 cut(s) 1057
MroI TCCGGA 1 cut(s) 754
MroNI GCCGGC 1 cut(s) 987
MscI TGGCCA 1 cut(s) 1057
MseI TTAA 3 cut(s) 51, 60, 647
MslI CAYNNNNRTG 1 cut(s) 357
Msp20I TGGCCA 1 cut(s) 1057
MspA1I CMGCKG 4 cut(s) 110, 170, 694, 964
MspI CCGG 9 cut(s) 219, 276, 727, 737, 755, 779, 988, 992, 1028
MspR9I CCNGG 5 cut(s) 277, 664, 737, 993, 1029
Mva1269I GAATGC 1 cut(s) 1157
MvaI CCWGG 1 cut(s) 664
MvnI CGCG 5 cut(s) 110, 311, 718, 964, 983
NaeI GCCGGC 1 cut(s) 989
NciI CCSGG 4 cut(s) 277, 737, 993, 1029
NdeII GATC 5 cut(s) 312, 379, 412, 864, 918
NgoMIV GCCGGC 1 cut(s) 987
NlaIII CATG 4 cut(s) 18, 319, 331, 443
NlaIV GGNNCC 8 cut(s) 381, 451, 452, 620, 689, 866, 914, 915
NmeAIII GCCGAG 5 cut(s) 54, 318, 499, 654, 1248
NmuCI GTSAC 1 cut(s) 210
NspI RCATGY 2 cut(s) 331, 443
PaeI GCATGC 2 cut(s) 331, 443
PaeR7I CTCGAG 1 cut(s) 950
PciSI GCTCTTC 1 cut(s) 696
PcsI WCGNNNNNNNCGW 3 cut(s) 355, 531, 914
PctI GAATGC 1 cut(s) 1157
PdiI GCCGGC 1 cut(s) 989
PfeI GAWTC 1 cut(s) 569
PflFI GACNNNGTC 1 cut(s) 302
PflMI CCANNNNNTGG 1 cut(s) 697
PleI GAGTC 3 cut(s) 227, 608, 1039
PpsI GAGTC 3 cut(s) 227, 608, 1039
PpuMI RGGWCCY 2 cut(s) 450, 913
Psp124BI GAGCTC 1 cut(s) 580
Psp5II RGGWCCY 2 cut(s) 450, 913
Psp6I CCWGG 1 cut(s) 662
PspFI CCCAGC 1 cut(s) 901
PspGI CCWGG 1 cut(s) 662
PspN4I GGNNCC 8 cut(s) 381, 451, 452, 620, 689, 866, 914, 915
PspPPI RGGWCCY 2 cut(s) 450, 913
PspXI VCTCGAGB 1 cut(s) 950
PstNI CAGNNNCTG 1 cut(s) 697
PsuI RGATCY 2 cut(s) 379, 864
PsyI GACNNNGTC 1 cut(s) 302
RsaI GTAC 1 cut(s) 786
RsaNI GTAC 1 cut(s) 785
RseI CAYNNNNRTG 1 cut(s) 357
Rsr2I CGGWCCG 1 cut(s) 221
RsrII CGGWCCG 1 cut(s) 221
SacI GAGCTC 1 cut(s) 580
SacII CCGCGG 2 cut(s) 111, 965
SalI GTCGAC 2 cut(s) 305, 1042
SapI GCTCTTC 1 cut(s) 696
SaqAI TTAA 3 cut(s) 51, 60, 647
Sau3AI GATC 5 cut(s) 312, 379, 412, 864, 918
SchI GAGTC 3 cut(s) 227, 609, 1039
ScrFI CCNGG 5 cut(s) 277, 664, 737, 993, 1029
SduI GDGCHC 5 cut(s) 364, 397, 580, 708, 908
SfaNI GCATC 5 cut(s) 175, 361, 508, 806, 1147
SfiI GGCCNNNNNGGCC 1 cut(s) 142
Sfr274I CTCGAG 1 cut(s) 950
Sfr303I CCGCGG 2 cut(s) 111, 965
SgrBI CCGCGG 2 cut(s) 111, 965
SgrDI CGTCGACG 1 cut(s) 305
SinI GGWCC 6 cut(s) 221, 245, 450, 688, 760, 913
SlaI CTCGAG 1 cut(s) 950
SmiMI CAYNNNNRTG 1 cut(s) 357
SmlI CTYRAG 1 cut(s) 950
SmoI CTYRAG 1 cut(s) 950
SphI GCATGC 2 cut(s) 331, 443
Sse9I AATT 1 cut(s) 52
SspMI CTAG 5 cut(s) 87, 1172, 1202, 1260, 1312
SstI GAGCTC 1 cut(s) 580
StyD4I CCNGG 5 cut(s) 275, 662, 735, 991, 1027
StyI CCWWGG 8 cut(s) 146, 564, 808, 1166, 1228, 1250, 1285, 1306
TaaI ACNGT 4 cut(s) 210, 249, 1041, 1105
TaiI ACGT 4 cut(s) 303, 528, 612, 716
TaqI TCGA 9 cut(s) 231, 306, 418, 429, 534, 572, 951, 1043, 1084
TaqII GACCGA 4 cut(s) 183, 419, 777, 813
TasI AATT 1 cut(s) 52
TfiI GAWTC 1 cut(s) 569
Tru1I TTAA 3 cut(s) 51, 60, 647
Tru9I TTAA 3 cut(s) 51, 60, 647
TseFI GTSAC 1 cut(s) 210
TseI GCWGC 5 cut(s) 324, 513, 545, 891, 955
Tsp45I GTSAC 1 cut(s) 210
TspGWI ACGGA 5 cut(s) 46, 268, 857, 1013, 1150
Tth111I GACNNNGTC 1 cut(s) 302
Van91I CCANNNNNTGG 1 cut(s) 697
VneI GTGCAC 1 cut(s) 393
VpaK11BI GGWCC 6 cut(s) 221, 245, 450, 688, 760, 913
XagI CCTNNNNNAGG 1 cut(s) 1205
XceI RCATGY 2 cut(s) 331, 443
XhoI CTCGAG 1 cut(s) 950
XmiI GTMKAC 2 cut(s) 306, 1043
XspI CTAG 5 cut(s) 87, 1172, 1202, 1260, 1312
ZraI GACGTC 2 cut(s) 301, 610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.