Rroxscaffold_65G00445390

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000065
OG0000104
Physical Location & Seq
Reverse (-)
77651 .. 78414
764 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_65G00445390.1

Sequence Viewer

Length: 648 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGCTGGGCACGGGGGTCCCGAGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACGGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

215

Amino Acids

23.65

Weight (kDa)

11.61

Isoelectric Point (pI)

68.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 172
AccB7I CCANNNNNTGG 1 cut(s) 258
AccBSI CCGCTC 2 cut(s) 56, 535
AccI GTMKAC 1 cut(s) 607
AccII CGCG 4 cut(s) 16, 279, 526, 545
AccIII TCCGGA 2 cut(s) 162, 315
AclWI GGATC 2 cut(s) 421, 434
AcoI YGGCCR 2 cut(s) 57, 551
AcyI GRCGYC 1 cut(s) 169
AfaI GTAC 2 cut(s) 348, 622
AfiI CCNNNNNNNGG 7 cut(s) 121, 229, 245, 258, 549, 556, 560
AgsI TTSAA 4 cut(s) 96, 110, 310, 601
AjiI CACGTC 1 cut(s) 275
AjnI CCWGG 2 cut(s) 33, 222
AluBI AGCT 1 cut(s) 517
AluI AGCT 1 cut(s) 517
Alw21I GWGCWC 1 cut(s) 269
Alw26I GTCTC 2 cut(s) 160, 371
AlwI GGATC 2 cut(s) 421, 434
AlwNI CAGNNNCTG 1 cut(s) 258
Ama87I CYCGRG 5 cut(s) 183, 437, 477, 512, 591
Aor13HI TCCGGA 2 cut(s) 162, 315
AoxI GGCC 5 cut(s) 57, 112, 179, 302, 551
ApeKI GCWGC 3 cut(s) 25, 453, 517
AspLEI GCGC 2 cut(s) 16, 295
AspS9I GGNCC 5 cut(s) 179, 249, 303, 321, 474
AsuC2I CCSGG 6 cut(s) 48, 298, 341, 555, 592, 593
AsuHPI GGTGA 2 cut(s) 386, 515
AvaI CYCGRG 5 cut(s) 183, 437, 477, 512, 591
AvaII GGWCC 3 cut(s) 249, 321, 474
BaeGI GKGCMC 1 cut(s) 469
BamHI GGATCC 1 cut(s) 426
Bbv12I GWGCWC 1 cut(s) 269
BbvI GCAGC 3 cut(s) 12, 440, 504
BceAI ACGGC 3 cut(s) 44, 157, 246
BciT130I CCWGG 2 cut(s) 35, 224
BcnI CCSGG 6 cut(s) 48, 298, 341, 555, 592, 593
BcoDI GTCTC 2 cut(s) 160, 371
BglI GCCNNNNNGGC 1 cut(s) 301
BglII AGATCT 1 cut(s) 70
BisI GCNGC 9 cut(s) 17, 26, 57, 256, 302, 454, 518, 527, 543
BlpI GCTNAGC 1 cut(s) 234
BlsI GCNGC 9 cut(s) 18, 27, 58, 257, 303, 455, 519, 528, 544
Bme1390I CCNGG 8 cut(s) 35, 48, 224, 298, 341, 555, 592, 593
Bme18I GGWCC 3 cut(s) 249, 321, 474
BmeT110I CYCGRG 5 cut(s) 183, 437, 477, 512, 591
BmgBI CACGTC 1 cut(s) 275
BmgT120I GGNCC 5 cut(s) 179, 249, 303, 321, 474
BmiI GGNNCC 6 cut(s) 131, 180, 250, 428, 475, 476
BmrFI CCNGG 8 cut(s) 35, 48, 224, 298, 341, 555, 592, 593
BmrI ACTGGG 1 cut(s) 575
BmsI GCATC 1 cut(s) 368
BmuI ACTGGG 1 cut(s) 575
Bpu1102I GCTNAGC 1 cut(s) 234
BpuMI CCSGG 6 cut(s) 48, 298, 341, 555, 592, 593
BsaHI GRCGYC 1 cut(s) 169
BsaI GGTCTC 1 cut(s) 371
BsaWI WCCGGW 3 cut(s) 162, 287, 315
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 233, 263
Bsc4I CCNNNNNNNGG 7 cut(s) 121, 229, 245, 258, 549, 556, 560
Bse118I RCCGGY 1 cut(s) 549
Bse1I ACTGG 2 cut(s) 570, 622
BseAI TCCGGA 2 cut(s) 162, 315
BseBI CCWGG 2 cut(s) 35, 224
BseLI CCNNNNNNNGG 7 cut(s) 121, 229, 245, 258, 549, 556, 560
BseMII CTCAG 2 cut(s) 248, 625
BseNI ACTGG 2 cut(s) 570, 622
BseSI GKGCMC 1 cut(s) 469
BseX3I CGGCCG 2 cut(s) 57, 551
BseXI GCAGC 3 cut(s) 12, 440, 504
BseYI CCCAGC 1 cut(s) 462
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 4 cut(s) 16, 279, 526, 545
Bsh1285I CGRYCG 5 cut(s) 23, 60, 345, 554, 607
BshFI GGCC 5 cut(s) 59, 114, 181, 304, 553
BsiEI CGRYCG 5 cut(s) 23, 60, 345, 554, 607
BsiHKAI GWGCWC 1 cut(s) 269
BsiHKCI CYCGRG 5 cut(s) 183, 437, 477, 512, 591
BslFI GGGAC 3 cut(s) 460, 467, 572
BslI CCNNNNNNNGG 7 cut(s) 121, 229, 245, 258, 549, 556, 560
BsmAI GTCTC 2 cut(s) 160, 371
BsmBI CGTCTC 1 cut(s) 160
BsmFI GGGAC 3 cut(s) 460, 467, 572
BsnI GGCC 5 cut(s) 59, 114, 181, 304, 553
Bso31I GGTCTC 1 cut(s) 371
BsoBI CYCGRG 5 cut(s) 183, 437, 477, 512, 591
Bsp1286I GDGCHC 2 cut(s) 269, 469
Bsp13I TCCGGA 2 cut(s) 162, 315
Bsp143I GATC 2 cut(s) 70, 426
Bsp1720I GCTNAGC 1 cut(s) 234
BspANI GGCC 5 cut(s) 59, 114, 181, 304, 553
BspCNI CTCAG 2 cut(s) 247, 624
BspEI TCCGGA 2 cut(s) 162, 315
BspFNI CGCG 4 cut(s) 16, 279, 526, 545
BspLI GGNNCC 6 cut(s) 131, 180, 250, 428, 475, 476
BspPI GGATC 2 cut(s) 421, 434
BspQI GCTCTTC 1 cut(s) 257
BspTNI GGTCTC 1 cut(s) 371
BsrBI CCGCTC 2 cut(s) 56, 535
BsrFI RCCGGY 1 cut(s) 549
BsrI ACTGG 2 cut(s) 570, 622
BssAI RCCGGY 1 cut(s) 549
BssMI GATC 2 cut(s) 70, 426
BssNI GRCGYC 1 cut(s) 169
BssT1I CCWWGG 1 cut(s) 370
Bst2UI CCWGG 2 cut(s) 35, 224
Bst4CI ACNGT 2 cut(s) 605, 643
Bst6I CTCTTC 3 cut(s) 112, 183, 257
BstACI GRCGYC 1 cut(s) 169
BstC8I GCNNGC 3 cut(s) 215, 547, 551
BstDEI CTNAG 2 cut(s) 234, 611
BstDSI CCRYGG 1 cut(s) 524
BstFNI CGCG 4 cut(s) 16, 279, 526, 545
BstHHI GCGC 2 cut(s) 16, 295
BstKTI GATC 2 cut(s) 73, 429
BstMAI GTCTC 2 cut(s) 160, 371
BstMBI GATC 2 cut(s) 70, 426
BstMCI CGRYCG 5 cut(s) 23, 60, 345, 554, 607
BstNI CCWGG 2 cut(s) 35, 224
BstSCI CCNGG 8 cut(s) 33, 46, 222, 296, 339, 553, 590, 591
BstSLI GKGCMC 1 cut(s) 469
BstUI CGCG 4 cut(s) 16, 279, 526, 545
BstV1I GCAGC 3 cut(s) 12, 440, 504
BstX2I RGATCY 2 cut(s) 70, 426
BstYI RGATCY 2 cut(s) 70, 426
BstZI CGGCCG 2 cut(s) 57, 551
BsuRI GGCC 5 cut(s) 59, 114, 181, 304, 553
BtgI CCRYGG 1 cut(s) 524
BtrI CACGTC 1 cut(s) 275
Cac8I GCNNGC 3 cut(s) 215, 547, 551
CaiI CAGNNNCTG 1 cut(s) 258
CfoI GCGC 2 cut(s) 16, 295
Cfr10I RCCGGY 1 cut(s) 549
Cfr13I GGNCC 5 cut(s) 179, 249, 303, 321, 474
Cfr42I CCGCGG 1 cut(s) 527
Cfr9I CCCGGG 1 cut(s) 591
Csp6I GTAC 2 cut(s) 347, 621
CviAII CATG 2 cut(s) 134, 153
CviQI GTAC 2 cut(s) 347, 621
DdeI CTNAG 2 cut(s) 234, 611
DpnI GATC 2 cut(s) 72, 428
DpnII GATC 2 cut(s) 70, 426
EaeI YGGCCR 2 cut(s) 57, 551
EagI CGGCCG 2 cut(s) 57, 551
Eam1104I CTCTTC 3 cut(s) 112, 183, 257
EarI CTCTTC 3 cut(s) 112, 183, 257
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 2 cut(s) 57, 551
Eco130I CCWWGG 1 cut(s) 370
Eco31I GGTCTC 1 cut(s) 371
Eco47I GGWCC 3 cut(s) 249, 321, 474
Eco52I CGGCCG 2 cut(s) 57, 551
Eco88I CYCGRG 5 cut(s) 183, 437, 477, 512, 591
EcoO109I RGGNCCY 2 cut(s) 179, 474
EcoRII CCWGG 2 cut(s) 33, 222
EcoT14I CCWWGG 1 cut(s) 370
ErhI CCWWGG 1 cut(s) 370
Esp3I CGTCTC 1 cut(s) 160
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 3 cut(s) 135, 154, 353
FaqI GGGAC 3 cut(s) 460, 467, 572
FatI CATG 2 cut(s) 133, 152
FauI CCCGC 2 cut(s) 168, 528
FblI GTMKAC 1 cut(s) 607
Fnu4HI GCNGC 9 cut(s) 17, 26, 57, 256, 302, 454, 518, 527, 543
Fsp4HI GCNGC 9 cut(s) 17, 26, 57, 256, 302, 454, 518, 527, 543
GlaI GCGC 2 cut(s) 15, 294
GluI GCNGC 9 cut(s) 17, 26, 57, 256, 302, 454, 518, 527, 543
GsaI CCCAGC 1 cut(s) 466
HaeIII GGCC 5 cut(s) 59, 114, 181, 304, 553
HhaI GCGC 2 cut(s) 16, 295
Hin1I GRCGYC 1 cut(s) 169
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 2 cut(s) 14, 293
HinP1I GCGC 2 cut(s) 14, 293
HincII GTYRAC 1 cut(s) 608
HindII GTYRAC 1 cut(s) 608
HinfI GANTC 4 cut(s) 159, 480, 609, 634
HphI GGTGA 2 cut(s) 386, 515
Hpy166II GTNNAC 4 cut(s) 139, 377, 506, 608
Hpy188I TCNGA 2 cut(s) 614, 639
Hpy188III TCNNGA 6 cut(s) 163, 185, 316, 439, 477, 484
Hpy8I GTNNAC 4 cut(s) 139, 377, 506, 608
Hpy99I CGWCG 4 cut(s) 65, 174, 279, 496
HpyAV CCTTC 2 cut(s) 104, 587
HpyCH4III ACNGT 2 cut(s) 605, 643
HpyCH4IV ACGT 2 cut(s) 169, 274
HpyCH4V TGCA 3 cut(s) 28, 68, 150
HpyF3I CTNAG 2 cut(s) 234, 611
HpySE526I ACGT 2 cut(s) 169, 274
Hsp92I GRCGYC 1 cut(s) 169
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 2 cut(s) 14, 293
KflI GGGWCCC 1 cut(s) 474
Kpn2I TCCGGA 2 cut(s) 162, 315
KroI GCCGGC 1 cut(s) 549
KroNI GCCGGC 1 cut(s) 551
KspI CCGCGG 1 cut(s) 527
Kzo9I GATC 2 cut(s) 70, 426
LguI GCTCTTC 1 cut(s) 257
LmnI GCTCC 2 cut(s) 53, 579
Lsp1109I GCAGC 3 cut(s) 12, 440, 504
LweI GCATC 1 cut(s) 368
MaeII ACGT 2 cut(s) 169, 274
MaeIII GTNAC 1 cut(s) 431
MalI GATC 2 cut(s) 72, 428
MbiI CCGCTC 2 cut(s) 56, 535
MboI GATC 2 cut(s) 70, 426
MboII GAAGA 3 cut(s) 129, 200, 274
MflI RGATCY 2 cut(s) 70, 426
MhlI GDGCHC 2 cut(s) 269, 469
MlyI GAGTC 3 cut(s) 168, 489, 603
MnlI CCTC 8 cut(s) 3, 113, 192, 235, 312, 393, 446, 451
MroI TCCGGA 2 cut(s) 162, 315
MroNI GCCGGC 1 cut(s) 549
MseI TTAA 2 cut(s) 207, 646
MspA1I CMGCKG 2 cut(s) 255, 526
MspR9I CCNGG 8 cut(s) 35, 48, 224, 298, 341, 555, 592, 593
MvaI CCWGG 2 cut(s) 35, 224
MvnI CGCG 4 cut(s) 16, 279, 526, 545
NaeI GCCGGC 1 cut(s) 551
NciI CCSGG 6 cut(s) 48, 298, 341, 555, 592, 593
NdeII GATC 2 cut(s) 70, 426
NgoMIV GCCGGC 1 cut(s) 549
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 6 cut(s) 131, 180, 250, 428, 475, 476
PaeR7I CTCGAG 1 cut(s) 512
PciSI GCTCTTC 1 cut(s) 257
PcsI WCGNNNNNNNCGW 1 cut(s) 475
PdiI GCCGGC 1 cut(s) 551
PfeI GAWTC 1 cut(s) 634
PflMI CCANNNNNTGG 1 cut(s) 258
PkrI GCNGC 9 cut(s) 18, 27, 58, 257, 303, 455, 519, 528, 544
PleI GAGTC 3 cut(s) 167, 488, 603
PpsI GAGTC 3 cut(s) 167, 488, 603
PpuMI RGGWCCY 1 cut(s) 474
Psp5II RGGWCCY 1 cut(s) 474
Psp6I CCWGG 2 cut(s) 33, 222
PspFI CCCAGC 1 cut(s) 462
PspGI CCWGG 2 cut(s) 33, 222
PspN4I GGNNCC 6 cut(s) 131, 180, 250, 428, 475, 476
PspPI GGNCC 5 cut(s) 179, 249, 303, 321, 474
PspPPI RGGWCCY 1 cut(s) 474
PspXI VCTCGAGB 1 cut(s) 512
PstNI CAGNNNCTG 1 cut(s) 258
PsuI RGATCY 2 cut(s) 70, 426
RsaI GTAC 2 cut(s) 348, 622
RsaNI GTAC 2 cut(s) 347, 621
SacII CCGCGG 1 cut(s) 527
SalI GTCGAC 1 cut(s) 606
SapI GCTCTTC 1 cut(s) 257
SaqAI TTAA 2 cut(s) 207, 646
SatI GCNGC 9 cut(s) 17, 26, 57, 256, 302, 454, 518, 527, 543
Sau3AI GATC 2 cut(s) 70, 426
Sau96I GGNCC 5 cut(s) 179, 249, 303, 321, 474
SchI GAGTC 3 cut(s) 168, 489, 603
ScrFI CCNGG 8 cut(s) 35, 48, 224, 298, 341, 555, 592, 593
SduI GDGCHC 2 cut(s) 269, 469
SetI ASST 9 cut(s) 36, 131, 172, 246, 277, 367, 376, 438, 519
SfaNI GCATC 1 cut(s) 368
Sfr274I CTCGAG 1 cut(s) 512
Sfr303I CCGCGG 1 cut(s) 527
SgrBI CCGCGG 1 cut(s) 527
SinI GGWCC 3 cut(s) 249, 321, 474
SlaI CTCGAG 1 cut(s) 512
SmaI CCCGGG 1 cut(s) 593
SmlI CTYRAG 1 cut(s) 512
SmoI CTYRAG 1 cut(s) 512
SspI AATATT 1 cut(s) 92
StyD4I CCNGG 8 cut(s) 33, 46, 222, 296, 339, 553, 590, 591
StyI CCWWGG 1 cut(s) 370
TaaI ACNGT 2 cut(s) 605, 643
TaiI ACGT 2 cut(s) 172, 277
TaqI TCGA 2 cut(s) 513, 607
TaqII GACCGA 2 cut(s) 338, 375
TauI GCSGC 6 cut(s) 19, 59, 258, 304, 529, 545
TfiI GAWTC 1 cut(s) 634
Tru1I TTAA 2 cut(s) 207, 646
Tru9I TTAA 2 cut(s) 207, 646
TseI GCWGC 3 cut(s) 25, 453, 517
TspGWI ACGGA 3 cut(s) 419, 576, 638
TspMI CCCGGG 1 cut(s) 591
Van91I CCANNNNNTGG 1 cut(s) 258
VpaK11BI GGWCC 3 cut(s) 249, 321, 474
XhoI CTCGAG 1 cut(s) 512
XmaI CCCGGG 1 cut(s) 591
XmiI GTMKAC 1 cut(s) 607
ZraI GACGTC 1 cut(s) 170
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.