Rroxscaffold_44G00440460

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000044
OG0000104
Physical Location & Seq
Forward (+)
9975 .. 10525
551 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_44G00440460.1

Sequence Viewer

Length: 447 bp
ATGGGGGCCGGCGATGCGCCTCGGTCGGATGTGGAACGGTCACAAGCCGGTCCGCCACTCGACTCGGGGCGTGGACCGTTACGGATTGCGGCGGCGGCCAAAGCCGGGCTGTTGATATGCCGTGGAGACGTCGTCGACGCGATCATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCTGCTAATGTGCGGGATCCCTTTGCGGGTGCACCGCCGACCGACCTTGATCTTCGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCGAGAGGAAACTCGGTGGAGGCCCGCAGCGATGCTGACGTGCAAATCGTTCGTCGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCGGGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

148

Amino Acids

15.78

Weight (kDa)

8.46

Isoelectric Point (pI)

52.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 132
AccBSI CCGCTC 1 cut(s) 309
AccI GTMKAC 2 cut(s) 135, 373
AccII CGCG 1 cut(s) 140
AciI CCGC 9 cut(s) 53, 89, 92, 95, 205, 218, 227, 309, 343
AclWI GGATC 2 cut(s) 203, 216
AcoI YGGCCR 1 cut(s) 96
AcyI GRCGYC 1 cut(s) 129
AfiI CCNNNNNNNGG 4 cut(s) 105, 218, 290, 310
AjiI CACGTC 1 cut(s) 358
AluBI AGCT 1 cut(s) 417
AluI AGCT 1 cut(s) 417
Alw21I GWGCWC 2 cut(s) 193, 226
Alw26I GTCTC 2 cut(s) 120, 170
Alw44I GTGCAC 1 cut(s) 222
AlwI GGATC 2 cut(s) 203, 216
Ama87I CYCGRG 2 cut(s) 64, 439
AoxI GGCC 3 cut(s) 6, 96, 339
ApaLI GTGCAC 1 cut(s) 222
ApeKI GCWGC 2 cut(s) 153, 345
ArsI GACNNNNNNTTYG 2 cut(s) 355, 387
AspLEI GCGC 2 cut(s) 19, 162
AspS9I GGNCC 5 cut(s) 6, 50, 74, 280, 340
AsuC2I CCSGG 1 cut(s) 106
AsuHPI GGTGA 1 cut(s) 305
AvaI CYCGRG 2 cut(s) 64, 439
AvaII GGWCC 3 cut(s) 50, 74, 280
BaeGI GKGCMC 1 cut(s) 226
BamHI GGATCC 1 cut(s) 208
Bbv12I GWGCWC 2 cut(s) 193, 226
BbvI GCAGC 2 cut(s) 165, 357
BccI CCATC 1 cut(s) 284
BceAI ACGGC 2 cut(s) 105, 147
BcgI CGANNNNNNTGC 4 cut(s) 257, 291, 350, 384
BcnI CCSGG 1 cut(s) 106
BcoDI GTCTC 2 cut(s) 120, 170
BfaI CTAG 1 cut(s) 411
BglI GCCNNNNNGGC 1 cut(s) 168
BisI GCNGC 5 cut(s) 90, 93, 96, 154, 346
BlsI GCNGC 5 cut(s) 91, 94, 97, 155, 347
Bme1390I CCNGG 1 cut(s) 106
Bme18I GGWCC 3 cut(s) 50, 74, 280
BmeT110I CYCGRG 2 cut(s) 64, 439
BmgBI CACGTC 1 cut(s) 358
BmgT120I GGNCC 5 cut(s) 6, 50, 74, 280, 340
BmiI GGNNCC 5 cut(s) 7, 210, 281, 282, 422
BmrFI CCNGG 1 cut(s) 106
BmsI GCATC 3 cut(s) 4, 190, 340
Bpu10I CCTNAGC 1 cut(s) 305
BpuMI CCSGG 1 cut(s) 106
BsaHI GRCGYC 1 cut(s) 129
BsaJI CCNNGG 3 cut(s) 20, 121, 438
BsaXI ACNNNNNCTCC 2 cut(s) 117, 147
Bsc4I CCNNNNNNNGG 4 cut(s) 105, 218, 290, 310
Bse118I RCCGGY 2 cut(s) 8, 47
BseDI CCNNGG 3 cut(s) 20, 121, 438
BseGI GGATG 1 cut(s) 34
BseLI CCNNNNNNNGG 4 cut(s) 105, 218, 290, 310
BseMII CTCAG 1 cut(s) 296
BseSI GKGCMC 1 cut(s) 226
BseXI GCAGC 2 cut(s) 165, 357
Bsh1236I CGCG 1 cut(s) 140
Bsh1285I CGRYCG 2 cut(s) 26, 234
BshFI GGCC 3 cut(s) 8, 98, 341
BsiEI CGRYCG 2 cut(s) 26, 234
BsiHKAI GWGCWC 2 cut(s) 193, 226
BsiHKCI CYCGRG 2 cut(s) 64, 439
BsiSI CCGG 3 cut(s) 9, 48, 105
BslFI GGGAC 1 cut(s) 293
BslI CCNNNNNNNGG 4 cut(s) 105, 218, 290, 310
BsmAI GTCTC 2 cut(s) 120, 170
BsmBI CGTCTC 2 cut(s) 120, 170
BsmFI GGGAC 1 cut(s) 293
BsnI GGCC 3 cut(s) 8, 98, 341
BsoBI CYCGRG 2 cut(s) 64, 439
Bsp1286I GDGCHC 2 cut(s) 193, 226
Bsp143I GATC 3 cut(s) 141, 208, 241
BspACI CCGC 9 cut(s) 53, 89, 92, 95, 205, 218, 227, 309, 343
BspANI GGCC 3 cut(s) 8, 98, 341
BspCNI CTCAG 1 cut(s) 297
BspFNI CGCG 1 cut(s) 140
BspLI GGNNCC 5 cut(s) 7, 210, 281, 282, 422
BspPI GGATC 2 cut(s) 203, 216
BsrBI CCGCTC 1 cut(s) 309
BsrFI RCCGGY 2 cut(s) 8, 47
BssAI RCCGGY 2 cut(s) 8, 47
BssECI CCNNGG 3 cut(s) 20, 121, 438
BssMI GATC 3 cut(s) 141, 208, 241
BssNI GRCGYC 1 cut(s) 129
Bst4CI ACNGT 3 cut(s) 39, 78, 408
BstACI GRCGYC 1 cut(s) 129
BstC8I GCNNGC 6 cut(s) 10, 158, 173, 189, 270, 343
BstDEI CTNAG 1 cut(s) 305
BstDSI CCRYGG 1 cut(s) 121
BstF5I GGATG 1 cut(s) 34
BstFNI CGCG 1 cut(s) 140
BstHHI GCGC 2 cut(s) 19, 162
BstKTI GATC 3 cut(s) 144, 211, 244
BstMAI GTCTC 2 cut(s) 120, 170
BstMBI GATC 3 cut(s) 141, 208, 241
BstMCI CGRYCG 2 cut(s) 26, 234
BstMWI GCNNNNNNNGC 5 cut(s) 14, 95, 101, 159, 168
BstNSI RCATGY 2 cut(s) 160, 272
BstSCI CCNGG 1 cut(s) 104
BstSLI GKGCMC 1 cut(s) 226
BstUI CGCG 1 cut(s) 140
BstV1I GCAGC 2 cut(s) 165, 357
BstX2I RGATCY 1 cut(s) 208
BstYI RGATCY 1 cut(s) 208
BsuRI GGCC 3 cut(s) 8, 98, 341
BtgI CCRYGG 1 cut(s) 121
BtgZI GCGATG 2 cut(s) 27, 363
BtrI CACGTC 1 cut(s) 358
BtsCI GGATG 1 cut(s) 34
Cac8I GCNNGC 6 cut(s) 10, 158, 173, 189, 270, 343
CfoI GCGC 2 cut(s) 19, 162
Cfr10I RCCGGY 2 cut(s) 8, 47
Cfr13I GGNCC 5 cut(s) 6, 50, 74, 280, 340
CpoI CGGWCCG 1 cut(s) 50
CseI GACGC 1 cut(s) 146
CspI CGGWCCG 1 cut(s) 50
CviAII CATG 3 cut(s) 145, 157, 269
CviJI RGCY 8 cut(s) 8, 47, 98, 104, 109, 319, 341, 417
CviKI_1 RGCY 8 cut(s) 8, 47, 98, 104, 109, 319, 341, 417
DdeI CTNAG 1 cut(s) 305
DpnI GATC 3 cut(s) 143, 210, 243
DpnII GATC 3 cut(s) 141, 208, 241
EaeI YGGCCR 1 cut(s) 96
EciI GGCGGA 1 cut(s) 42
Eco47I GGWCC 3 cut(s) 50, 74, 280
Eco88I CYCGRG 2 cut(s) 64, 439
EcoO109I RGGNCCY 1 cut(s) 280
Esp3I CGTCTC 2 cut(s) 120, 170
FaeI CATG 3 cut(s) 148, 160, 272
FaiI YATR 6 cut(s) 118, 146, 158, 270, 301, 384
FaqI GGGAC 1 cut(s) 293
FatI CATG 3 cut(s) 144, 156, 268
FauI CCCGC 4 cut(s) 198, 211, 302, 350
FblI GTMKAC 2 cut(s) 135, 373
Fnu4HI GCNGC 5 cut(s) 90, 93, 96, 154, 346
FokI GGATG 1 cut(s) 41
Fsp4HI GCNGC 5 cut(s) 90, 93, 96, 154, 346
FspBI CTAG 1 cut(s) 411
GlaI GCGC 2 cut(s) 18, 161
GluI GCNGC 5 cut(s) 90, 93, 96, 154, 346
HaeIII GGCC 3 cut(s) 8, 98, 341
HapII CCGG 3 cut(s) 9, 48, 105
HgaI GACGC 1 cut(s) 146
HhaI GCGC 2 cut(s) 19, 162
Hin1I GRCGYC 1 cut(s) 129
Hin1II CATG 3 cut(s) 148, 160, 272
Hin6I GCGC 2 cut(s) 17, 160
HinP1I GCGC 2 cut(s) 17, 160
HincII GTYRAC 2 cut(s) 136, 374
HindII GTYRAC 2 cut(s) 136, 374
HinfI GANTC 1 cut(s) 62
HpaII CCGG 3 cut(s) 9, 48, 105
HphI GGTGA 1 cut(s) 305
Hpy166II GTNNAC 5 cut(s) 74, 136, 224, 296, 374
Hpy188I TCNGA 2 cut(s) 28, 429
Hpy188III TCNNGA 3 cut(s) 248, 278, 441
Hpy8I GTNNAC 5 cut(s) 74, 136, 224, 296, 374
Hpy99I CGWCG 4 cut(s) 134, 137, 140, 375
HpyAV CCTTC 1 cut(s) 245
HpyCH4III ACNGT 3 cut(s) 39, 78, 408
HpyCH4IV ACGT 2 cut(s) 129, 357
HpyCH4V TGCA 2 cut(s) 224, 361
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 95, 101, 159, 168
HpyF3I CTNAG 1 cut(s) 305
HpySE526I ACGT 2 cut(s) 129, 357
Hsp92I GRCGYC 1 cut(s) 129
Hsp92II CATG 3 cut(s) 148, 160, 272
HspAI GCGC 2 cut(s) 17, 160
KflI GGGWCCC 1 cut(s) 280
KroI GCCGGC 1 cut(s) 8
KroNI GCCGGC 1 cut(s) 10
Kzo9I GATC 3 cut(s) 141, 208, 241
LmnI GCTCC 1 cut(s) 196
LpnPI CCDG 7 cut(s) 22, 61, 118, 207, 286, 317, 403
Lsp1109I GCAGC 2 cut(s) 165, 357
LweI GCATC 3 cut(s) 4, 190, 340
MaeI CTAG 1 cut(s) 411
MaeII ACGT 2 cut(s) 129, 357
MaeIII GTNAC 2 cut(s) 39, 78
MalI GATC 3 cut(s) 143, 210, 243
MbiI CCGCTC 1 cut(s) 309
MboI GATC 3 cut(s) 141, 208, 241
MboII GAAGA 1 cut(s) 236
MflI RGATCY 1 cut(s) 208
MhlI GDGCHC 2 cut(s) 193, 226
MlyI GAGTC 1 cut(s) 56
MmeI TCCRAC 1 cut(s) 6
MnlI CCTC 4 cut(s) 30, 317, 331, 435
MroNI GCCGGC 1 cut(s) 8
MslI CAYNNNNRTG 1 cut(s) 186
MspI CCGG 3 cut(s) 9, 48, 105
MspR9I CCNGG 1 cut(s) 106
MvnI CGCG 1 cut(s) 140
MwoI GCNNNNNNNGC 5 cut(s) 14, 95, 101, 159, 168
NaeI GCCGGC 1 cut(s) 10
NciI CCSGG 1 cut(s) 106
NdeII GATC 3 cut(s) 141, 208, 241
NgoMIV GCCGGC 1 cut(s) 8
NlaIII CATG 3 cut(s) 148, 160, 272
NlaIV GGNNCC 5 cut(s) 7, 210, 281, 282, 422
NmeAIII GCCGAG 2 cut(s) 147, 345
NmuCI GTSAC 1 cut(s) 39
NspI RCATGY 2 cut(s) 160, 272
PaeI GCATGC 2 cut(s) 160, 272
PcsI WCGNNNNNNNCGW 2 cut(s) 184, 363
PdiI GCCGGC 1 cut(s) 10
PflFI GACNNNGTC 1 cut(s) 131
PkrI GCNGC 5 cut(s) 91, 94, 97, 155, 347
PleI GAGTC 1 cut(s) 56
PpsI GAGTC 1 cut(s) 56
PpuMI RGGWCCY 1 cut(s) 280
Psp5II RGGWCCY 1 cut(s) 280
PspN4I GGNNCC 5 cut(s) 7, 210, 281, 282, 422
PspPI GGNCC 5 cut(s) 6, 50, 74, 280, 340
PspPPI RGGWCCY 1 cut(s) 280
PsuI RGATCY 1 cut(s) 208
PsyI GACNNNGTC 1 cut(s) 131
RseI CAYNNNNRTG 1 cut(s) 186
Rsr2I CGGWCCG 1 cut(s) 50
RsrII CGGWCCG 1 cut(s) 50
SalI GTCGAC 2 cut(s) 134, 372
SatI GCNGC 5 cut(s) 90, 93, 96, 154, 346
Sau3AI GATC 3 cut(s) 141, 208, 241
Sau96I GGNCC 5 cut(s) 6, 50, 74, 280, 340
SchI GAGTC 1 cut(s) 56
ScrFI CCNGG 1 cut(s) 106
SduI GDGCHC 2 cut(s) 193, 226
SetI ASST 4 cut(s) 132, 240, 360, 419
SfaNI GCATC 3 cut(s) 4, 190, 340
SgrDI CGTCGACG 1 cut(s) 134
SinI GGWCC 3 cut(s) 50, 74, 280
SmiMI CAYNNNNRTG 1 cut(s) 186
SphI GCATGC 2 cut(s) 160, 272
SsiI CCGC 9 cut(s) 53, 89, 92, 95, 205, 218, 227, 309, 343
SspMI CTAG 1 cut(s) 411
StyD4I CCNGG 1 cut(s) 104
TaaI ACNGT 3 cut(s) 39, 78, 408
TaiI ACGT 2 cut(s) 132, 360
TaqI TCGA 6 cut(s) 60, 135, 247, 258, 373, 402
TaqII GACCGA 2 cut(s) 12, 248
TauI GCSGC 3 cut(s) 92, 95, 98
TseFI GTSAC 1 cut(s) 39
TseI GCWGC 2 cut(s) 153, 345
Tsp45I GTSAC 1 cut(s) 39
TspGWI ACGGA 1 cut(s) 97
Tth111I GACNNNGTC 1 cut(s) 131
VneI GTGCAC 1 cut(s) 222
VpaK11BI GGWCC 3 cut(s) 50, 74, 280
XceI RCATGY 2 cut(s) 160, 272
XmiI GTMKAC 2 cut(s) 135, 373
XspI CTAG 1 cut(s) 411
ZraI GACGTC 1 cut(s) 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.