Rroxscaffold_73G00439250

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000073
OG0000104
Physical Location & Seq
Reverse (-)
130974 .. 132399
1426 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_73G00439250.1

Sequence Viewer

Length: 747 bp
ATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCTGGTAACGGCCTGCGGGCTCCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCGACATGTGACGGCGTGGCTGCTTTGTTGAGCCACGCCAAGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCGAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTACGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACGAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTCGCGTCTCGCGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGTGGTTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTGCTGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

248

Amino Acids

26.63

Weight (kDa)

10.97

Isoelectric Point (pI)

47.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 103
AatII GACGTC 1 cut(s) 414
AccB1I GGYRCC 1 cut(s) 224
AccB7I CCANNNNNTGG 1 cut(s) 499
AccI GTMKAC 1 cut(s) 107
AccII CGCG 5 cut(s) 237, 324, 331, 333, 520
AccIII TCCGGA 2 cut(s) 404, 556
AciI CCGC 8 cut(s) 64, 198, 309, 417, 496, 511, 542, 597
AclI AACGTT 1 cut(s) 393
AclWI GGATC 2 cut(s) 663, 676
AcsI RAATTY 1 cut(s) 359
AcyI GRCGYC 1 cut(s) 411
AfaI GTAC 1 cut(s) 588
AflIII ACRYGT 1 cut(s) 110
AgsI TTSAA 2 cut(s) 89, 551
AjiI CACGTC 2 cut(s) 376, 516
AjnI CCWGG 2 cut(s) 49, 464
AluBI AGCT 1 cut(s) 158
AluI AGCT 1 cut(s) 158
Alw21I GWGCWC 3 cut(s) 49, 160, 510
Alw26I GTCTC 4 cut(s) 26, 331, 402, 611
AlwI GGATC 2 cut(s) 663, 676
AlwNI CAGNNNCTG 1 cut(s) 499
Ama87I CYCGRG 2 cut(s) 425, 679
Aor13HI TCCGGA 2 cut(s) 404, 556
AoxI GGCC 5 cut(s) 58, 78, 167, 421, 543
ApeKI GCWGC 3 cut(s) 9, 125, 695
ApoI RAATTY 1 cut(s) 359
AspLEI GCGC 4 cut(s) 18, 239, 333, 536
AspS9I GGNCC 8 cut(s) 79, 96, 167, 421, 490, 544, 562, 716
AsuC2I CCSGG 3 cut(s) 216, 371, 539
AsuHPI GGTGA 1 cut(s) 626
AsuII TTCGAA 1 cut(s) 340
AvaI CYCGRG 2 cut(s) 425, 679
AvaII GGWCC 4 cut(s) 96, 490, 562, 716
BaeGI GKGCMC 2 cut(s) 229, 711
BamHI GGATCC 1 cut(s) 668
BanI GGYRCC 1 cut(s) 224
BanII GRGCYC 2 cut(s) 70, 160
BarI GAAGNNNNNNTAC 2 cut(s) 203, 235
Bbv12I GWGCWC 3 cut(s) 49, 160, 510
BbvI GCAGC 3 cut(s) 21, 112, 682
BceAI ACGGC 5 cut(s) 3, 73, 133, 403, 488
BciT130I CCWGG 2 cut(s) 51, 466
BcnI CCSGG 3 cut(s) 216, 371, 539
BcoDI GTCTC 4 cut(s) 26, 331, 402, 611
BfaI CTAG 1 cut(s) 245
BglI GCCNNNNNGGC 2 cut(s) 24, 542
BisI GCNGC 5 cut(s) 10, 126, 497, 543, 696
BlsI GCNGC 5 cut(s) 11, 127, 498, 544, 697
Bme1390I CCNGG 5 cut(s) 51, 216, 371, 466, 539
Bme18I GGWCC 4 cut(s) 96, 490, 562, 716
BmeT110I CYCGRG 2 cut(s) 425, 679
BmgBI CACGTC 2 cut(s) 376, 516
BmgT120I GGNCC 8 cut(s) 79, 96, 167, 421, 490, 544, 562, 716
BmiI GGNNCC 7 cut(s) 69, 226, 422, 491, 670, 717, 718
BmrFI CCNGG 5 cut(s) 51, 216, 371, 466, 539
BmrI ACTGGG 1 cut(s) 714
BmsI GCATC 3 cut(s) 46, 185, 608
BmuI ACTGGG 1 cut(s) 714
BoxI GACNNNNGTC 1 cut(s) 289
Bpu10I CCTNAGC 1 cut(s) 312
Bpu14I TTCGAA 1 cut(s) 340
BpuMI CCSGG 3 cut(s) 216, 371, 539
BsaHI GRCGYC 1 cut(s) 411
BsaI GGTCTC 1 cut(s) 611
BsaJI CCNNGG 7 cut(s) 99, 144, 424, 464, 537, 610, 678
BsaWI WCCGGW 4 cut(s) 207, 404, 528, 556
BsaXI ACNNNNNCTCC 2 cut(s) 474, 504
Bse118I RCCGGY 1 cut(s) 580
Bse1I ACTGG 2 cut(s) 194, 720
BseAI TCCGGA 2 cut(s) 404, 556
BseBI CCWGG 2 cut(s) 51, 466
BseDI CCNNGG 7 cut(s) 99, 144, 424, 464, 537, 610, 678
BseGI GGATG 1 cut(s) 207
BseNI ACTGG 2 cut(s) 194, 720
BseSI GKGCMC 2 cut(s) 229, 711
BseXI GCAGC 3 cut(s) 21, 112, 682
BseYI CCCAGC 1 cut(s) 704
Bsh1236I CGCG 5 cut(s) 237, 324, 331, 333, 520
Bsh1285I CGRYCG 1 cut(s) 585
BshFI GGCC 5 cut(s) 60, 80, 169, 423, 545
BshNI GGYRCC 1 cut(s) 224
BsiEI CGRYCG 1 cut(s) 585
BsiHKAI GWGCWC 3 cut(s) 49, 160, 510
BsiHKCI CYCGRG 2 cut(s) 425, 679
BsiSI CCGG 9 cut(s) 208, 215, 370, 405, 480, 529, 539, 557, 581
BslFI GGGAC 3 cut(s) 386, 702, 708
BsmAI GTCTC 4 cut(s) 26, 331, 402, 611
BsmBI CGTCTC 3 cut(s) 26, 331, 402
BsmFI GGGAC 3 cut(s) 386, 702, 708
BsnI GGCC 5 cut(s) 60, 80, 169, 423, 545
Bso31I GGTCTC 1 cut(s) 611
BsoBI CYCGRG 2 cut(s) 425, 679
Bsp119I TTCGAA 1 cut(s) 340
Bsp1286I GDGCHC 6 cut(s) 49, 70, 160, 229, 510, 711
Bsp13I TCCGGA 2 cut(s) 404, 556
Bsp143I GATC 1 cut(s) 668
BspACI CCGC 8 cut(s) 64, 198, 309, 417, 496, 511, 542, 597
BspANI GGCC 5 cut(s) 60, 80, 169, 423, 545
BspEI TCCGGA 2 cut(s) 404, 556
BspFNI CGCG 5 cut(s) 237, 324, 331, 333, 520
BspLI GGNNCC 7 cut(s) 69, 226, 422, 491, 670, 717, 718
BspPI GGATC 2 cut(s) 663, 676
BspQI GCTCTTC 1 cut(s) 498
BspT104I TTCGAA 1 cut(s) 340
BspT107I GGYRCC 1 cut(s) 224
BspTNI GGTCTC 1 cut(s) 611
BsrFI RCCGGY 1 cut(s) 580
BsrI ACTGG 2 cut(s) 194, 720
BssAI RCCGGY 1 cut(s) 580
BssECI CCNNGG 7 cut(s) 99, 144, 424, 464, 537, 610, 678
BssMI GATC 1 cut(s) 668
BssNI GRCGYC 1 cut(s) 411
BssT1I CCWWGG 3 cut(s) 99, 144, 610
Bst2UI CCWGG 2 cut(s) 51, 466
Bst4CI ACNGT 2 cut(s) 224, 288
Bst6I CTCTTC 2 cut(s) 425, 498
BstACI GRCGYC 1 cut(s) 411
BstBI TTCGAA 1 cut(s) 340
BstC8I GCNNGC 8 cut(s) 14, 29, 45, 62, 66, 457, 477, 624
BstDEI CTNAG 1 cut(s) 312
BstF5I GGATG 1 cut(s) 207
BstFNI CGCG 5 cut(s) 237, 324, 331, 333, 520
BstHHI GCGC 4 cut(s) 18, 239, 333, 536
BstKTI GATC 1 cut(s) 671
BstMAI GTCTC 4 cut(s) 26, 331, 402, 611
BstMBI GATC 1 cut(s) 668
BstMCI CGRYCG 1 cut(s) 585
BstMWI GCNNNNNNNGC 7 cut(s) 15, 24, 330, 505, 542, 577, 701
BstNI CCWGG 2 cut(s) 51, 466
BstNSI RCATGY 2 cut(s) 16, 114
BstPAI GACNNNNGTC 1 cut(s) 289
BstSCI CCNGG 5 cut(s) 49, 214, 369, 464, 537
BstSLI GKGCMC 2 cut(s) 229, 711
BstUI CGCG 5 cut(s) 237, 324, 331, 333, 520
BstV1I GCAGC 3 cut(s) 21, 112, 682
BstX2I RGATCY 1 cut(s) 668
BstYI RGATCY 1 cut(s) 668
BsuRI GGCC 5 cut(s) 60, 80, 169, 423, 545
BtgZI GCGATG 1 cut(s) 208
BtrI CACGTC 2 cut(s) 376, 516
BtsCI GGATG 1 cut(s) 207
Cac8I GCNNGC 8 cut(s) 14, 29, 45, 62, 66, 457, 477, 624
CaiI CAGNNNCTG 1 cut(s) 499
CfoI GCGC 4 cut(s) 18, 239, 333, 536
Cfr10I RCCGGY 1 cut(s) 580
Cfr13I GGNCC 8 cut(s) 79, 96, 167, 421, 490, 544, 562, 716
CseI GACGC 1 cut(s) 313
Csp6I GTAC 1 cut(s) 587
CviAII CATG 3 cut(s) 13, 111, 294
CviQI GTAC 1 cut(s) 587
DdeI CTNAG 1 cut(s) 312
DpnI GATC 1 cut(s) 670
DpnII GATC 1 cut(s) 668
DrdI GACNNNNNNGTC 1 cut(s) 103
DseDI GACNNNNNNGTC 1 cut(s) 103
Eam1104I CTCTTC 2 cut(s) 425, 498
EarI CTCTTC 2 cut(s) 425, 498
Ecl136II GAGCTC 1 cut(s) 158
Eco130I CCWWGG 3 cut(s) 99, 144, 610
Eco24I GRGCYC 2 cut(s) 70, 160
Eco31I GGTCTC 1 cut(s) 611
Eco47I GGWCC 4 cut(s) 96, 490, 562, 716
Eco53kI GAGCTC 1 cut(s) 158
Eco88I CYCGRG 2 cut(s) 425, 679
EcoICRI GAGCTC 1 cut(s) 158
EcoO109I RGGNCCY 2 cut(s) 421, 716
EcoRII CCWGG 2 cut(s) 49, 464
EcoT14I CCWWGG 3 cut(s) 99, 144, 610
EcoT38I GRGCYC 2 cut(s) 70, 160
ErhI CCWWGG 3 cut(s) 99, 144, 610
Esp3I CGTCTC 3 cut(s) 26, 331, 402
FaeI CATG 3 cut(s) 16, 114, 297
FaiI YATR 4 cut(s) 14, 112, 295, 593
FaqI GGGAC 3 cut(s) 386, 702, 708
FatI CATG 3 cut(s) 12, 110, 293
FauI CCCGC 3 cut(s) 57, 191, 410
FblI GTMKAC 1 cut(s) 107
Fnu4HI GCNGC 5 cut(s) 10, 126, 497, 543, 696
FokI GGATG 1 cut(s) 214
FriOI GRGCYC 2 cut(s) 70, 160
Fsp4HI GCNGC 5 cut(s) 10, 126, 497, 543, 696
FspBI CTAG 1 cut(s) 245
GlaI GCGC 4 cut(s) 17, 238, 332, 535
GluI GCNGC 5 cut(s) 10, 126, 497, 543, 696
GsaI CCCAGC 1 cut(s) 708
HaeIII GGCC 5 cut(s) 60, 80, 169, 423, 545
HapII CCGG 9 cut(s) 208, 215, 370, 405, 480, 529, 539, 557, 581
HgaI GACGC 1 cut(s) 313
HhaI GCGC 4 cut(s) 18, 239, 333, 536
Hin1I GRCGYC 1 cut(s) 411
Hin1II CATG 3 cut(s) 16, 114, 297
Hin6I GCGC 4 cut(s) 16, 237, 331, 534
HinP1I GCGC 4 cut(s) 16, 237, 331, 534
HincII GTYRAC 2 cut(s) 108, 385
HindII GTYRAC 2 cut(s) 108, 385
HinfI GANTC 4 cut(s) 104, 149, 348, 401
HpaII CCGG 9 cut(s) 208, 215, 370, 405, 480, 529, 539, 557, 581
HphI GGTGA 1 cut(s) 626
Hpy166II GTNNAC 3 cut(s) 108, 385, 617
Hpy188III TCNNGA 8 cut(s) 86, 153, 364, 405, 427, 557, 681, 725
Hpy8I GTNNAC 3 cut(s) 108, 385, 617
Hpy99I CGWCG 3 cut(s) 416, 520, 737
HpyCH4III ACNGT 2 cut(s) 224, 288
HpyCH4IV ACGT 4 cut(s) 375, 393, 411, 515
HpyF10VI GCNNNNNNNGC 7 cut(s) 15, 24, 330, 505, 542, 577, 701
HpyF3I CTNAG 1 cut(s) 312
HpySE526I ACGT 4 cut(s) 375, 393, 411, 515
Hsp92I GRCGYC 1 cut(s) 411
Hsp92II CATG 3 cut(s) 16, 114, 297
HspAI GCGC 4 cut(s) 16, 237, 331, 534
KflI GGGWCCC 1 cut(s) 716
Kpn2I TCCGGA 2 cut(s) 404, 556
Kzo9I GATC 1 cut(s) 668
LguI GCTCTTC 1 cut(s) 498
LmnI GCTCC 3 cut(s) 52, 73, 163
Lsp1109I GCAGC 3 cut(s) 21, 112, 682
LweI GCATC 3 cut(s) 46, 185, 608
MaeI CTAG 1 cut(s) 245
MaeII ACGT 4 cut(s) 375, 393, 411, 515
MaeIII GTNAC 4 cut(s) 53, 113, 218, 673
MalI GATC 1 cut(s) 670
MboI GATC 1 cut(s) 668
MboII GAAGA 2 cut(s) 442, 515
MflI RGATCY 1 cut(s) 668
MhlI GDGCHC 6 cut(s) 49, 70, 160, 229, 510, 711
MluCI AATT 1 cut(s) 359
MlyI GAGTC 2 cut(s) 113, 410
MnlI CCTC 5 cut(s) 434, 476, 553, 688, 693
MroI TCCGGA 2 cut(s) 404, 556
MseI TTAA 3 cut(s) 272, 356, 449
MslI CAYNNNNRTG 1 cut(s) 42
MspA1I CMGCKG 1 cut(s) 496
MspI CCGG 9 cut(s) 208, 215, 370, 405, 480, 529, 539, 557, 581
MspR9I CCNGG 5 cut(s) 51, 216, 371, 466, 539
MvaI CCWGG 2 cut(s) 51, 466
MvnI CGCG 5 cut(s) 237, 324, 331, 333, 520
MwoI GCNNNNNNNGC 7 cut(s) 15, 24, 330, 505, 542, 577, 701
NciI CCSGG 3 cut(s) 216, 371, 539
NdeII GATC 1 cut(s) 668
NlaIII CATG 3 cut(s) 16, 114, 297
NlaIV GGNNCC 7 cut(s) 69, 226, 422, 491, 670, 717, 718
NmuCI GTSAC 1 cut(s) 113
NspI RCATGY 2 cut(s) 16, 114
NspV TTCGAA 1 cut(s) 340
PaeI GCATGC 1 cut(s) 16
PciI ACATGT 1 cut(s) 110
PciSI GCTCTTC 1 cut(s) 498
PcsI WCGNNNNNNNCGW 2 cut(s) 40, 274
PfeI GAWTC 2 cut(s) 149, 348
PflMI CCANNNNNTGG 1 cut(s) 499
PkrI GCNGC 5 cut(s) 11, 127, 498, 544, 697
PleI GAGTC 2 cut(s) 112, 409
PpsI GAGTC 2 cut(s) 112, 409
PpuMI RGGWCCY 1 cut(s) 716
PscI ACATGT 1 cut(s) 110
PshAI GACNNNNGTC 1 cut(s) 289
Psp124BI GAGCTC 1 cut(s) 160
Psp1406I AACGTT 1 cut(s) 393
Psp5II RGGWCCY 1 cut(s) 716
Psp6I CCWGG 2 cut(s) 49, 464
PspFI CCCAGC 1 cut(s) 704
PspGI CCWGG 2 cut(s) 49, 464
PspN4I GGNNCC 7 cut(s) 69, 226, 422, 491, 670, 717, 718
PspPI GGNCC 8 cut(s) 79, 96, 167, 421, 490, 544, 562, 716
PspPPI RGGWCCY 1 cut(s) 716
PstNI CAGNNNCTG 1 cut(s) 499
PsuI RGATCY 1 cut(s) 668
RsaI GTAC 1 cut(s) 588
RsaNI GTAC 1 cut(s) 587
RseI CAYNNNNRTG 1 cut(s) 42
SacI GAGCTC 1 cut(s) 160
SalI GTCGAC 1 cut(s) 106
SapI GCTCTTC 1 cut(s) 498
SaqAI TTAA 3 cut(s) 272, 356, 449
SatI GCNGC 5 cut(s) 10, 126, 497, 543, 696
Sau3AI GATC 1 cut(s) 668
Sau96I GGNCC 8 cut(s) 79, 96, 167, 421, 490, 544, 562, 716
SchI GAGTC 2 cut(s) 113, 410
ScrFI CCNGG 5 cut(s) 51, 216, 371, 466, 539
SduI GDGCHC 6 cut(s) 49, 70, 160, 229, 510, 711
SfaNI GCATC 3 cut(s) 46, 185, 608
SfuI TTCGAA 1 cut(s) 340
SinI GGWCC 4 cut(s) 96, 490, 562, 716
SmiMI CAYNNNNRTG 1 cut(s) 42
SphI GCATGC 1 cut(s) 16
Sse9I AATT 1 cut(s) 359
SsiI CCGC 8 cut(s) 64, 198, 309, 417, 496, 511, 542, 597
SspMI CTAG 1 cut(s) 245
SstI GAGCTC 1 cut(s) 160
StyD4I CCNGG 5 cut(s) 49, 214, 369, 464, 537
StyI CCWWGG 3 cut(s) 99, 144, 610
TaaI ACNGT 2 cut(s) 224, 288
TaiI ACGT 4 cut(s) 378, 396, 414, 518
TaqI TCGA 5 cut(s) 107, 152, 268, 302, 340
TaqII GACCGA 1 cut(s) 579
TasI AATT 1 cut(s) 359
TauI GCSGC 2 cut(s) 499, 545
TfiI GAWTC 2 cut(s) 149, 348
Tru1I TTAA 3 cut(s) 272, 356, 449
Tru9I TTAA 3 cut(s) 272, 356, 449
TseFI GTSAC 1 cut(s) 113
TseI GCWGC 3 cut(s) 9, 125, 695
Tsp45I GTSAC 1 cut(s) 113
TspDTI ATGAA 1 cut(s) 218
TspGWI ACGGA 2 cut(s) 109, 661
Van91I CCANNNNNTGG 1 cut(s) 499
VpaK11BI GGWCC 4 cut(s) 96, 490, 562, 716
XapI RAATTY 1 cut(s) 359
XceI RCATGY 2 cut(s) 16, 114
XmiI GTMKAC 1 cut(s) 107
XspI CTAG 1 cut(s) 245
ZraI GACGTC 1 cut(s) 412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.