Rroxscaffold_45G00438870

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000045
OG0000104
Physical Location & Seq
Reverse (-)
48422 .. 51560
3139 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_45G00438870.1

Sequence Viewer

Length: 711 bp
ATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCTGGTAACGGCCTGCGGGCTTCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCCGACATGTGTGCGAGTCAACGGGTGATTAAACCCGTAAGGCGCAAGGAAGCTAATGTGCGGGATCCCTTTGCGGGTGCACCGCCGACCGACCTTGATCTTCCGAGAAGGGTTCGAGACGGCGTGGCTGCTTTGTTGAGCCACGCCAAGGAATCGAGAGCTCCAAGTGGGCCATTTTTGCCTGCCCACCCCGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCCTCTGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCTCATCTCGGACTCGCTTGGCCTTGCCGACGACGCTTCCTAACGAATGCGATGCCAAGCCAAGGCTAGGCAATGCCGTGGTCGACAGAGGCTTCCTAGCGAAGGATAATGCAATGCCGAGCCAAGGCTTTGCCAAGACAATGCCAAGGCTTGCTAGTGAGGCTAATGCAATGTCAAGCCAAGGCTTGCCAAGACAATGCCAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

236

Amino Acids

25.49

Weight (kDa)

11.54

Isoelectric Point (pI)

61.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 103
AccI GTMKAC 1 cut(s) 585
AccII CGCG 1 cut(s) 352
AccIII TCCGGA 1 cut(s) 387
AciI CCGC 8 cut(s) 64, 166, 179, 188, 328, 343, 373, 429
AclWI GGATC 4 cut(s) 164, 177, 495, 508
AcoI YGGCCR 1 cut(s) 329
AfaI GTAC 1 cut(s) 420
AflIII ACRYGT 1 cut(s) 111
AgsI TTSAA 2 cut(s) 89, 382
AjiI CACGTC 1 cut(s) 348
AjnI CCWGG 1 cut(s) 49
AluBI AGCT 2 cut(s) 158, 266
AluI AGCT 2 cut(s) 158, 266
Alw21I GWGCWC 4 cut(s) 49, 187, 268, 342
Alw26I GTCTC 3 cut(s) 26, 216, 443
Alw44I GTGCAC 1 cut(s) 183
AlwI GGATC 4 cut(s) 164, 177, 495, 508
Aor13HI TCCGGA 1 cut(s) 387
AoxI GGCC 6 cut(s) 58, 78, 275, 329, 374, 522
ApaLI GTGCAC 1 cut(s) 183
ApeKI GCWGC 2 cut(s) 9, 233
AspLEI GCGC 3 cut(s) 18, 150, 368
AspS9I GGNCC 6 cut(s) 79, 96, 275, 322, 375, 393
AsuC2I CCSGG 3 cut(s) 297, 370, 413
AsuHPI GGTGA 2 cut(s) 142, 458
AvaII GGWCC 3 cut(s) 96, 322, 393
BaeGI GKGCMC 1 cut(s) 187
BamHI GGATCC 2 cut(s) 169, 500
BanII GRGCYC 1 cut(s) 268
Bbv12I GWGCWC 4 cut(s) 49, 187, 268, 342
BbvI GCAGC 2 cut(s) 21, 220
BceAI ACGGC 5 cut(s) 3, 73, 241, 319, 563
BcgI CGANNNNNNTGC 4 cut(s) 98, 132, 536, 570
BciT130I CCWGG 1 cut(s) 51
BcnI CCSGG 3 cut(s) 297, 370, 413
BcoDI GTCTC 3 cut(s) 26, 216, 443
BfaI CTAG 4 cut(s) 569, 599, 657, 709
BglI GCCNNNNNGGC 1 cut(s) 24
BisI GCNGC 4 cut(s) 10, 234, 329, 374
BlpI GCTNAGC 1 cut(s) 307
BlsI GCNGC 4 cut(s) 11, 235, 330, 375
Bme1390I CCNGG 4 cut(s) 51, 297, 370, 413
Bme18I GGWCC 3 cut(s) 96, 322, 393
BmgBI CACGTC 1 cut(s) 348
BmgT120I GGNCC 6 cut(s) 79, 96, 275, 322, 375, 393
BmiI GGNNCC 3 cut(s) 171, 323, 502
BmrFI CCNGG 4 cut(s) 51, 297, 370, 413
BmsI GCATC 3 cut(s) 46, 440, 544
Bpu1102I GCTNAGC 1 cut(s) 307
BpuMI CCSGG 3 cut(s) 297, 370, 413
BsaBI GATNNNNATC 1 cut(s) 505
BsaI GGTCTC 1 cut(s) 443
BsaWI WCCGGW 2 cut(s) 360, 387
BsaXI ACNNNNNCTCC 2 cut(s) 306, 336
Bse3DI GCAATG 3 cut(s) 580, 621, 678
Bse8I GATNNNNATC 1 cut(s) 505
BseAI TCCGGA 1 cut(s) 387
BseBI CCWGG 1 cut(s) 51
BseJI GATNNNNATC 1 cut(s) 505
BseMI GCAATG 3 cut(s) 580, 621, 678
BseMII CTCAG 1 cut(s) 321
BseSI GKGCMC 1 cut(s) 187
BseX3I CGGCCG 1 cut(s) 329
BseXI GCAGC 2 cut(s) 21, 220
Bsh1236I CGCG 1 cut(s) 352
Bsh1285I CGRYCG 3 cut(s) 195, 332, 417
BshFI GGCC 6 cut(s) 60, 80, 277, 331, 376, 524
BsiEI CGRYCG 3 cut(s) 195, 332, 417
BsiHKAI GWGCWC 4 cut(s) 49, 187, 268, 342
BsiSI CCGG 7 cut(s) 297, 312, 332, 361, 370, 388, 413
BsmAI GTCTC 3 cut(s) 26, 216, 443
BsmBI CGTCTC 2 cut(s) 26, 216
BsmI GAATGC 1 cut(s) 554
BsnI GGCC 6 cut(s) 60, 80, 277, 331, 376, 524
Bso31I GGTCTC 1 cut(s) 443
Bsp1286I GDGCHC 4 cut(s) 49, 187, 268, 342
Bsp13I TCCGGA 1 cut(s) 387
Bsp143I GATC 3 cut(s) 169, 202, 500
Bsp1720I GCTNAGC 1 cut(s) 307
BspACI CCGC 8 cut(s) 64, 166, 179, 188, 328, 343, 373, 429
BspANI GGCC 6 cut(s) 60, 80, 277, 331, 376, 524
BspCNI CTCAG 1 cut(s) 320
BspEI TCCGGA 1 cut(s) 387
BspFNI CGCG 1 cut(s) 352
BspLI GGNNCC 3 cut(s) 171, 323, 502
BspPI GGATC 4 cut(s) 164, 177, 495, 508
BspQI GCTCTTC 1 cut(s) 330
BspTNI GGTCTC 1 cut(s) 443
BsrDI GCAATG 3 cut(s) 580, 621, 678
BssMI GATC 3 cut(s) 169, 202, 500
BssT1I CCWWGG 8 cut(s) 99, 252, 442, 563, 625, 647, 682, 703
Bst2UI CCWGG 1 cut(s) 51
Bst6I CTCTTC 1 cut(s) 330
BstC8I GCNNGC 8 cut(s) 14, 29, 45, 62, 66, 288, 654, 689
BstDEI CTNAG 1 cut(s) 307
BstDSI CCRYGG 1 cut(s) 579
BstENI CCTNNNNNAGG 1 cut(s) 602
BstFNI CGCG 1 cut(s) 352
BstHHI GCGC 3 cut(s) 18, 150, 368
BstKTI GATC 3 cut(s) 172, 205, 503
BstMAI GTCTC 3 cut(s) 26, 216, 443
BstMBI GATC 3 cut(s) 169, 202, 500
BstMCI CGRYCG 3 cut(s) 195, 332, 417
BstMWI GCNNNNNNNGC 7 cut(s) 15, 24, 283, 337, 408, 535, 662
BstNI CCWGG 1 cut(s) 51
BstNSI RCATGY 2 cut(s) 16, 115
BstSCI CCNGG 4 cut(s) 49, 295, 368, 411
BstSLI GKGCMC 1 cut(s) 187
BstUI CGCG 1 cut(s) 352
BstV1I GCAGC 2 cut(s) 21, 220
BstX2I RGATCY 2 cut(s) 169, 500
BstYI RGATCY 2 cut(s) 169, 500
BstZI CGGCCG 1 cut(s) 329
BsuRI GGCC 6 cut(s) 60, 80, 277, 331, 376, 524
BtgI CCRYGG 1 cut(s) 579
BtgZI GCGATG 1 cut(s) 567
BtrI CACGTC 1 cut(s) 348
Cac8I GCNNGC 8 cut(s) 14, 29, 45, 62, 66, 288, 654, 689
CfoI GCGC 3 cut(s) 18, 150, 368
Cfr13I GGNCC 6 cut(s) 79, 96, 275, 322, 375, 393
CseI GACGC 1 cut(s) 544
Csp6I GTAC 1 cut(s) 419
CviAII CATG 2 cut(s) 13, 112
CviQI GTAC 1 cut(s) 419
DdeI CTNAG 1 cut(s) 307
DpnI GATC 3 cut(s) 171, 204, 502
DpnII GATC 3 cut(s) 169, 202, 500
DrdI GACNNNNNNGTC 1 cut(s) 103
DseDI GACNNNNNNGTC 1 cut(s) 103
EaeI YGGCCR 1 cut(s) 329
EagI CGGCCG 1 cut(s) 329
Eam1104I CTCTTC 1 cut(s) 330
EarI CTCTTC 1 cut(s) 330
Ecl136II GAGCTC 1 cut(s) 266
EclXI CGGCCG 1 cut(s) 329
Eco130I CCWWGG 8 cut(s) 99, 252, 442, 563, 625, 647, 682, 703
Eco24I GRGCYC 1 cut(s) 268
Eco31I GGTCTC 1 cut(s) 443
Eco47I GGWCC 3 cut(s) 96, 322, 393
Eco52I CGGCCG 1 cut(s) 329
Eco53kI GAGCTC 1 cut(s) 266
EcoICRI GAGCTC 1 cut(s) 266
EcoNI CCTNNNNNAGG 1 cut(s) 602
EcoRII CCWGG 1 cut(s) 49
EcoT14I CCWWGG 8 cut(s) 99, 252, 442, 563, 625, 647, 682, 703
EcoT38I GRGCYC 1 cut(s) 268
ErhI CCWWGG 8 cut(s) 99, 252, 442, 563, 625, 647, 682, 703
Esp3I CGTCTC 2 cut(s) 26, 216
FaeI CATG 2 cut(s) 16, 115
FaiI YATR 3 cut(s) 14, 113, 425
FatI CATG 2 cut(s) 12, 111
FauI CCCGC 3 cut(s) 57, 159, 172
FblI GTMKAC 1 cut(s) 585
Fnu4HI GCNGC 4 cut(s) 10, 234, 329, 374
FriOI GRGCYC 1 cut(s) 268
Fsp4HI GCNGC 4 cut(s) 10, 234, 329, 374
FspBI CTAG 4 cut(s) 569, 599, 657, 709
GlaI GCGC 3 cut(s) 17, 149, 367
GluI GCNGC 4 cut(s) 10, 234, 329, 374
HaeIII GGCC 6 cut(s) 60, 80, 277, 331, 376, 524
HapII CCGG 7 cut(s) 297, 312, 332, 361, 370, 388, 413
HgaI GACGC 1 cut(s) 544
HhaI GCGC 3 cut(s) 18, 150, 368
Hin1II CATG 2 cut(s) 16, 115
Hin6I GCGC 3 cut(s) 16, 148, 366
HinP1I GCGC 3 cut(s) 16, 148, 366
HincII GTYRAC 2 cut(s) 125, 586
HindII GTYRAC 2 cut(s) 125, 586
HinfI GANTC 4 cut(s) 104, 121, 257, 514
HpaII CCGG 7 cut(s) 297, 312, 332, 361, 370, 388, 413
HphI GGTGA 2 cut(s) 142, 458
Hpy166II GTNNAC 4 cut(s) 125, 185, 449, 586
Hpy188I TCNGA 3 cut(s) 109, 210, 513
Hpy188III TCNNGA 4 cut(s) 86, 221, 261, 388
Hpy8I GTNNAC 4 cut(s) 125, 185, 449, 586
Hpy99I CGWCG 3 cut(s) 352, 535, 538
HpyAV CCTTC 2 cut(s) 207, 598
HpyCH4IV ACGT 1 cut(s) 347
HpyCH4V TGCA 3 cut(s) 185, 614, 671
HpyF10VI GCNNNNNNNGC 7 cut(s) 15, 24, 283, 337, 408, 535, 662
HpyF3I CTNAG 1 cut(s) 307
HpySE526I ACGT 1 cut(s) 347
Hsp92II CATG 2 cut(s) 16, 115
HspAI GCGC 3 cut(s) 16, 148, 366
Kpn2I TCCGGA 1 cut(s) 387
Kzo9I GATC 3 cut(s) 169, 202, 500
LguI GCTCTTC 1 cut(s) 330
LmnI GCTCC 2 cut(s) 52, 271
Lsp1109I GCAGC 2 cut(s) 21, 220
LweI GCATC 3 cut(s) 46, 440, 544
MaeI CTAG 4 cut(s) 569, 599, 657, 709
MaeII ACGT 1 cut(s) 347
MaeIII GTNAC 1 cut(s) 53
MalI GATC 3 cut(s) 171, 204, 502
MboI GATC 3 cut(s) 169, 202, 500
MboII GAAGA 2 cut(s) 197, 347
MflI RGATCY 2 cut(s) 169, 500
MhlI GDGCHC 4 cut(s) 49, 187, 268, 342
MlyI GAGTC 3 cut(s) 113, 130, 508
MmeI TCCRAC 1 cut(s) 132
MnlI CCTC 6 cut(s) 308, 384, 466, 514, 584, 655
MroI TCCGGA 1 cut(s) 387
MseI TTAA 1 cut(s) 135
MslI CAYNNNNRTG 1 cut(s) 42
MspA1I CMGCKG 1 cut(s) 328
MspI CCGG 7 cut(s) 297, 312, 332, 361, 370, 388, 413
MspR9I CCNGG 4 cut(s) 51, 297, 370, 413
Mva1269I GAATGC 1 cut(s) 554
MvaI CCWGG 1 cut(s) 51
MvnI CGCG 1 cut(s) 352
MwoI GCNNNNNNNGC 7 cut(s) 15, 24, 283, 337, 408, 535, 662
NciI CCSGG 3 cut(s) 297, 370, 413
NdeII GATC 3 cut(s) 169, 202, 500
NlaIII CATG 2 cut(s) 16, 115
NlaIV GGNNCC 3 cut(s) 171, 323, 502
NmeAIII GCCGAG 1 cut(s) 645
NspI RCATGY 2 cut(s) 16, 115
PaeI GCATGC 1 cut(s) 16
PciI ACATGT 1 cut(s) 111
PciSI GCTCTTC 1 cut(s) 330
PcsI WCGNNNNNNNCGW 1 cut(s) 40
PctI GAATGC 1 cut(s) 554
PfeI GAWTC 1 cut(s) 257
PkrI GCNGC 4 cut(s) 11, 235, 330, 375
PleI GAGTC 3 cut(s) 112, 129, 508
PpsI GAGTC 3 cut(s) 112, 129, 508
PscI ACATGT 1 cut(s) 111
Psp124BI GAGCTC 1 cut(s) 268
Psp6I CCWGG 1 cut(s) 49
PspGI CCWGG 1 cut(s) 49
PspN4I GGNNCC 3 cut(s) 171, 323, 502
PspPI GGNCC 6 cut(s) 79, 96, 275, 322, 375, 393
PsuI RGATCY 2 cut(s) 169, 500
RsaI GTAC 1 cut(s) 420
RsaNI GTAC 1 cut(s) 419
RseI CAYNNNNRTG 1 cut(s) 42
SacI GAGCTC 1 cut(s) 268
SalI GTCGAC 1 cut(s) 584
SapI GCTCTTC 1 cut(s) 330
SaqAI TTAA 1 cut(s) 135
SatI GCNGC 4 cut(s) 10, 234, 329, 374
Sau3AI GATC 3 cut(s) 169, 202, 500
Sau96I GGNCC 6 cut(s) 79, 96, 275, 322, 375, 393
SchI GAGTC 3 cut(s) 113, 130, 508
ScrFI CCNGG 4 cut(s) 51, 297, 370, 413
SduI GDGCHC 4 cut(s) 49, 187, 268, 342
SetI ASST 7 cut(s) 160, 201, 268, 319, 350, 439, 448
SfaNI GCATC 3 cut(s) 46, 440, 544
SinI GGWCC 3 cut(s) 96, 322, 393
SmiMI CAYNNNNRTG 1 cut(s) 42
SphI GCATGC 1 cut(s) 16
SsiI CCGC 8 cut(s) 64, 166, 179, 188, 328, 343, 373, 429
SspMI CTAG 4 cut(s) 569, 599, 657, 709
SstI GAGCTC 1 cut(s) 268
StyD4I CCNGG 4 cut(s) 49, 295, 368, 411
StyI CCWWGG 8 cut(s) 99, 252, 442, 563, 625, 647, 682, 703
TaiI ACGT 1 cut(s) 350
TaqI TCGA 3 cut(s) 220, 260, 585
TaqII GACCGA 2 cut(s) 209, 410
TauI GCSGC 2 cut(s) 331, 376
TfiI GAWTC 1 cut(s) 257
Tru1I TTAA 1 cut(s) 135
Tru9I TTAA 1 cut(s) 135
TseI GCWGC 2 cut(s) 9, 233
TspGWI ACGGA 1 cut(s) 109
VneI GTGCAC 1 cut(s) 183
VpaK11BI GGWCC 3 cut(s) 96, 322, 393
XagI CCTNNNNNAGG 1 cut(s) 602
XceI RCATGY 2 cut(s) 16, 115
XmiI GTMKAC 1 cut(s) 585
XspI CTAG 4 cut(s) 569, 599, 657, 709
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.