Rroxscaffold_74G00442890

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000074
OG0000104
Physical Location & Seq
Reverse (-)
48581 .. 49555
975 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_74G00442890.1

Sequence Viewer

Length: 663 bp
ATGAACCGGAAGCCGGGTTACGGTGCCCAACTACGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGAGCAGGACGGTGGTCATGGAACGCGTCTCGCGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCCGAACCGGGACGTGGTGGTTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCCGGAAACGGCTCGCCGGAGGTAGGGTCCAGCGGCGGAAGAGCACCGCACGTCGCGTGGTGTCGGTGCGCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCGGGTCTCCAAGGTGAACAGCCTCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCGGGCACGGGGGTCCCGGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCCGGGCGTTCAACGGTCGACTCGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

220

Amino Acids

24.28

Weight (kDa)

11.58

Isoelectric Point (pI)

50.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 192
AccB1I GGYRCC 1 cut(s) 23
AccBSI CCGCTC 1 cut(s) 547
AccI GTMKAC 1 cut(s) 619
AccII CGCG 7 cut(s) 36, 102, 109, 111, 297, 538, 557
AccIII TCCGGA 2 cut(s) 182, 331
AclI AACGTT 1 cut(s) 171
AclWI GGATC 2 cut(s) 436, 449
AcoI YGGCCR 1 cut(s) 563
AcsI RAATTY 1 cut(s) 137
AcyI GRCGYC 1 cut(s) 189
AfaI GTAC 2 cut(s) 363, 633
AfiI CCNNNNNNNGG 8 cut(s) 13, 20, 56, 148, 154, 249, 264, 561
AflIII ACRYGT 1 cut(s) 100
AgsI TTSAA 2 cut(s) 326, 613
AjiI CACGTC 2 cut(s) 154, 293
AluBI AGCT 1 cut(s) 529
AluI AGCT 1 cut(s) 529
Alw21I GWGCWC 1 cut(s) 287
Alw26I GTCTC 3 cut(s) 109, 180, 386
AlwI GGATC 2 cut(s) 436, 449
Ama87I CYCGRG 5 cut(s) 203, 452, 469, 524, 603
Aor13HI TCCGGA 2 cut(s) 182, 331
AoxI GGCC 3 cut(s) 199, 318, 563
ApeKI GCWGC 1 cut(s) 529
ApoI RAATTY 1 cut(s) 137
AspLEI GCGC 3 cut(s) 38, 111, 312
AspS9I GGNCC 6 cut(s) 199, 268, 319, 337, 487, 493
AsuC2I CCSGG 8 cut(s) 15, 149, 244, 314, 491, 567, 604, 605
AsuHPI GGTGA 2 cut(s) 401, 527
AsuII TTCGAA 1 cut(s) 118
AvaI CYCGRG 5 cut(s) 203, 452, 469, 524, 603
AvaII GGWCC 4 cut(s) 268, 337, 487, 493
BaeGI GKGCMC 2 cut(s) 28, 482
BamHI GGATCC 1 cut(s) 441
BanI GGYRCC 1 cut(s) 23
BarI GAAGNNNNNNTAC 1 cut(s) 34
Bbv12I GWGCWC 1 cut(s) 287
BbvI GCAGC 1 cut(s) 516
BceAI ACGGC 2 cut(s) 181, 266
BcnI CCSGG 8 cut(s) 15, 149, 244, 314, 491, 567, 604, 605
BcoDI GTCTC 3 cut(s) 109, 180, 386
BfaI CTAG 1 cut(s) 44
BisI GCNGC 5 cut(s) 275, 318, 530, 539, 555
BlsI GCNGC 5 cut(s) 276, 319, 531, 540, 556
Bme1390I CCNGG 8 cut(s) 15, 149, 244, 314, 491, 567, 604, 605
Bme18I GGWCC 4 cut(s) 268, 337, 487, 493
BmeT110I CYCGRG 5 cut(s) 203, 452, 469, 524, 603
BmgBI CACGTC 2 cut(s) 154, 293
BmgT120I GGNCC 6 cut(s) 199, 268, 319, 337, 487, 493
BmiI GGNNCC 7 cut(s) 25, 200, 269, 443, 488, 489, 495
BmrFI CCNGG 8 cut(s) 15, 149, 244, 314, 491, 567, 604, 605
BmrI ACTGGG 1 cut(s) 586
BmsI GCATC 1 cut(s) 383
BmuI ACTGGG 1 cut(s) 586
BoxI GACNNNNGTC 1 cut(s) 89
Bpu14I TTCGAA 1 cut(s) 118
BpuMI CCSGG 8 cut(s) 15, 149, 244, 314, 491, 567, 604, 605
BsaHI GRCGYC 1 cut(s) 189
BsaI GGTCTC 1 cut(s) 386
BsaJI CCNNGG 9 cut(s) 202, 242, 385, 398, 451, 536, 566, 602, 603
BsaWI WCCGGW 3 cut(s) 6, 182, 331
BsaXI ACNNNNNCTCC 2 cut(s) 252, 282
Bsc4I CCNNNNNNNGG 8 cut(s) 13, 20, 56, 148, 154, 249, 264, 561
Bse118I RCCGGY 2 cut(s) 355, 561
Bse1I ACTGG 2 cut(s) 581, 633
BseAI TCCGGA 2 cut(s) 182, 331
BseDI CCNNGG 9 cut(s) 202, 242, 385, 398, 451, 536, 566, 602, 603
BseLI CCNNNNNNNGG 8 cut(s) 13, 20, 56, 148, 154, 249, 264, 561
BseNI ACTGG 2 cut(s) 581, 633
BseSI GKGCMC 2 cut(s) 28, 482
BseX3I CGGCCG 1 cut(s) 563
BseXI GCAGC 1 cut(s) 516
Bsh1236I CGCG 7 cut(s) 36, 102, 109, 111, 297, 538, 557
Bsh1285I CGRYCG 3 cut(s) 360, 566, 619
BshFI GGCC 3 cut(s) 201, 320, 565
BshNI GGYRCC 1 cut(s) 23
BsiEI CGRYCG 3 cut(s) 360, 566, 619
BsiHKAI GWGCWC 1 cut(s) 287
BsiHKCI CYCGRG 5 cut(s) 203, 452, 469, 524, 603
BslFI GGGAC 4 cut(s) 164, 473, 479, 583
BslI CCNNNNNNNGG 8 cut(s) 13, 20, 56, 148, 154, 249, 264, 561
BsmAI GTCTC 3 cut(s) 109, 180, 386
BsmBI CGTCTC 2 cut(s) 109, 180
BsmFI GGGAC 4 cut(s) 164, 473, 479, 583
BsnI GGCC 3 cut(s) 201, 320, 565
Bso31I GGTCTC 1 cut(s) 386
BsoBI CYCGRG 5 cut(s) 203, 452, 469, 524, 603
Bsp119I TTCGAA 1 cut(s) 118
Bsp1286I GDGCHC 3 cut(s) 28, 287, 482
Bsp13I TCCGGA 2 cut(s) 182, 331
Bsp143I GATC 1 cut(s) 441
BspANI GGCC 3 cut(s) 201, 320, 565
BspEI TCCGGA 2 cut(s) 182, 331
BspFNI CGCG 7 cut(s) 36, 102, 109, 111, 297, 538, 557
BspLI GGNNCC 7 cut(s) 25, 200, 269, 443, 488, 489, 495
BspPI GGATC 2 cut(s) 436, 449
BspQI GCTCTTC 1 cut(s) 275
BspT104I TTCGAA 1 cut(s) 118
BspT107I GGYRCC 1 cut(s) 23
BspTNI GGTCTC 1 cut(s) 386
BsrBI CCGCTC 1 cut(s) 547
BsrFI RCCGGY 2 cut(s) 355, 561
BsrI ACTGG 2 cut(s) 581, 633
BssAI RCCGGY 2 cut(s) 355, 561
BssECI CCNNGG 9 cut(s) 202, 242, 385, 398, 451, 536, 566, 602, 603
BssMI GATC 1 cut(s) 441
BssNI GRCGYC 1 cut(s) 189
BssT1I CCWWGG 1 cut(s) 385
Bst4CI ACNGT 4 cut(s) 23, 88, 617, 654
Bst6I CTCTTC 2 cut(s) 203, 275
BstACI GRCGYC 1 cut(s) 189
BstBI TTCGAA 1 cut(s) 118
BstC8I GCNNGC 5 cut(s) 235, 255, 478, 559, 563
BstDSI CCRYGG 1 cut(s) 536
BstFNI CGCG 7 cut(s) 36, 102, 109, 111, 297, 538, 557
BstHHI GCGC 3 cut(s) 38, 111, 312
BstKTI GATC 1 cut(s) 444
BstMAI GTCTC 3 cut(s) 109, 180, 386
BstMBI GATC 1 cut(s) 441
BstMCI CGRYCG 3 cut(s) 360, 566, 619
BstMWI GCNNNNNNNGC 6 cut(s) 108, 352, 529, 535, 538, 544
BstPAI GACNNNNGTC 1 cut(s) 89
BstSCI CCNGG 8 cut(s) 13, 147, 242, 312, 489, 565, 602, 603
BstSLI GKGCMC 2 cut(s) 28, 482
BstUI CGCG 7 cut(s) 36, 102, 109, 111, 297, 538, 557
BstV1I GCAGC 1 cut(s) 516
BstX2I RGATCY 1 cut(s) 441
BstYI RGATCY 1 cut(s) 441
BstZI CGGCCG 1 cut(s) 563
BsuRI GGCC 3 cut(s) 201, 320, 565
BtgI CCRYGG 1 cut(s) 536
BtrI CACGTC 2 cut(s) 154, 293
Cac8I GCNNGC 5 cut(s) 235, 255, 478, 559, 563
CfoI GCGC 3 cut(s) 38, 111, 312
Cfr10I RCCGGY 2 cut(s) 355, 561
Cfr13I GGNCC 6 cut(s) 199, 268, 319, 337, 487, 493
Cfr42I CCGCGG 1 cut(s) 539
Cfr9I CCCGGG 1 cut(s) 603
CseI GACGC 1 cut(s) 91
Csp6I GTAC 2 cut(s) 362, 632
CviAII CATG 1 cut(s) 94
CviQI GTAC 2 cut(s) 362, 632
DpnI GATC 1 cut(s) 443
DpnII GATC 1 cut(s) 441
EaeI YGGCCR 1 cut(s) 563
EagI CGGCCG 1 cut(s) 563
Eam1104I CTCTTC 2 cut(s) 203, 275
EarI CTCTTC 2 cut(s) 203, 275
EciI GGCGGA 1 cut(s) 292
EclXI CGGCCG 1 cut(s) 563
Eco130I CCWWGG 1 cut(s) 385
Eco31I GGTCTC 1 cut(s) 386
Eco47I GGWCC 4 cut(s) 268, 337, 487, 493
Eco52I CGGCCG 1 cut(s) 563
Eco88I CYCGRG 5 cut(s) 203, 452, 469, 524, 603
EcoO109I RGGNCCY 2 cut(s) 199, 487
EcoT14I CCWWGG 1 cut(s) 385
ErhI CCWWGG 1 cut(s) 385
Esp3I CGTCTC 2 cut(s) 109, 180
FaeI CATG 1 cut(s) 97
FaiI YATR 2 cut(s) 95, 368
FaqI GGGAC 4 cut(s) 164, 473, 479, 583
FatI CATG 1 cut(s) 93
FauI CCCGC 3 cut(s) 188, 469, 540
FblI GTMKAC 1 cut(s) 619
Fnu4HI GCNGC 5 cut(s) 275, 318, 530, 539, 555
Fsp4HI GCNGC 5 cut(s) 275, 318, 530, 539, 555
FspBI CTAG 1 cut(s) 44
GlaI GCGC 3 cut(s) 37, 110, 311
GluI GCNGC 5 cut(s) 275, 318, 530, 539, 555
HaeIII GGCC 3 cut(s) 201, 320, 565
HgaI GACGC 1 cut(s) 91
HhaI GCGC 3 cut(s) 38, 111, 312
Hin1I GRCGYC 1 cut(s) 189
Hin1II CATG 1 cut(s) 97
Hin6I GCGC 3 cut(s) 36, 109, 310
HinP1I GCGC 3 cut(s) 36, 109, 310
HincII GTYRAC 2 cut(s) 163, 620
HindII GTYRAC 2 cut(s) 163, 620
HinfI GANTC 4 cut(s) 126, 179, 621, 645
HphI GGTGA 2 cut(s) 401, 527
Hpy166II GTNNAC 4 cut(s) 163, 392, 518, 620
Hpy188I TCNGA 1 cut(s) 650
Hpy188III TCNNGA 6 cut(s) 142, 183, 205, 332, 454, 496
Hpy8I GTNNAC 4 cut(s) 163, 392, 518, 620
Hpy99I CGWCG 3 cut(s) 194, 297, 508
HpyAV CCTTC 1 cut(s) 598
HpyCH4III ACNGT 4 cut(s) 23, 88, 617, 654
HpyCH4IV ACGT 4 cut(s) 153, 171, 189, 292
HpyF10VI GCNNNNNNNGC 6 cut(s) 108, 352, 529, 535, 538, 544
HpySE526I ACGT 4 cut(s) 153, 171, 189, 292
Hsp92I GRCGYC 1 cut(s) 189
Hsp92II CATG 1 cut(s) 97
HspAI GCGC 3 cut(s) 36, 109, 310
KflI GGGWCCC 1 cut(s) 487
Kpn2I TCCGGA 2 cut(s) 182, 331
KroI GCCGGC 1 cut(s) 561
KroNI GCCGGC 1 cut(s) 563
KspI CCGCGG 1 cut(s) 539
Kzo9I GATC 1 cut(s) 441
LguI GCTCTTC 1 cut(s) 275
LmnI GCTCC 1 cut(s) 590
Lsp1109I GCAGC 1 cut(s) 516
LweI GCATC 1 cut(s) 383
MaeI CTAG 1 cut(s) 44
MaeII ACGT 4 cut(s) 153, 171, 189, 292
MaeIII GTNAC 2 cut(s) 17, 446
MalI GATC 1 cut(s) 443
MbiI CCGCTC 1 cut(s) 547
MboI GATC 1 cut(s) 441
MboII GAAGA 2 cut(s) 220, 292
MflI RGATCY 1 cut(s) 441
MhlI GDGCHC 3 cut(s) 28, 287, 482
MluCI AATT 2 cut(s) 137, 658
MluI ACGCGT 1 cut(s) 100
MlyI GAGTC 2 cut(s) 188, 615
MnlI CCTC 6 cut(s) 212, 254, 328, 408, 461, 465
MroI TCCGGA 2 cut(s) 182, 331
MroNI GCCGGC 1 cut(s) 561
MseI TTAA 5 cut(s) 71, 134, 227, 657, 661
MspA1I CMGCKG 2 cut(s) 274, 538
MspR9I CCNGG 8 cut(s) 15, 149, 244, 314, 491, 567, 604, 605
MvnI CGCG 7 cut(s) 36, 102, 109, 111, 297, 538, 557
MwoI GCNNNNNNNGC 6 cut(s) 108, 352, 529, 535, 538, 544
NaeI GCCGGC 1 cut(s) 563
NciI CCSGG 8 cut(s) 15, 149, 244, 314, 491, 567, 604, 605
NdeII GATC 1 cut(s) 441
NgoMIV GCCGGC 1 cut(s) 561
NlaIII CATG 1 cut(s) 97
NlaIV GGNNCC 7 cut(s) 25, 200, 269, 443, 488, 489, 495
NspV TTCGAA 1 cut(s) 118
PacI TTAATTAA 1 cut(s) 661
PaeR7I CTCGAG 2 cut(s) 469, 524
PciSI GCTCTTC 1 cut(s) 275
PcsI WCGNNNNNNNCGW 1 cut(s) 621
PdiI GCCGGC 1 cut(s) 563
PfeI GAWTC 2 cut(s) 126, 645
PkrI GCNGC 5 cut(s) 276, 319, 531, 540, 556
PleI GAGTC 2 cut(s) 187, 615
PpsI GAGTC 2 cut(s) 187, 615
PpuMI RGGWCCY 1 cut(s) 487
PshAI GACNNNNGTC 1 cut(s) 89
Psp1406I AACGTT 1 cut(s) 171
Psp5II RGGWCCY 1 cut(s) 487
PspN4I GGNNCC 7 cut(s) 25, 200, 269, 443, 488, 489, 495
PspPI GGNCC 6 cut(s) 199, 268, 319, 337, 487, 493
PspPPI RGGWCCY 1 cut(s) 487
PspXI VCTCGAGB 2 cut(s) 469, 524
PsuI RGATCY 1 cut(s) 441
RsaI GTAC 2 cut(s) 363, 633
RsaNI GTAC 2 cut(s) 362, 632
SacII CCGCGG 1 cut(s) 539
SalI GTCGAC 1 cut(s) 618
SapI GCTCTTC 1 cut(s) 275
SaqAI TTAA 5 cut(s) 71, 134, 227, 657, 661
SatI GCNGC 5 cut(s) 275, 318, 530, 539, 555
Sau3AI GATC 1 cut(s) 441
Sau96I GGNCC 6 cut(s) 199, 268, 319, 337, 487, 493
SchI GAGTC 2 cut(s) 188, 615
ScrFI CCNGG 8 cut(s) 15, 149, 244, 314, 491, 567, 604, 605
SduI GDGCHC 3 cut(s) 28, 287, 482
SetI ASST 9 cut(s) 45, 156, 174, 192, 265, 295, 391, 453, 531
SfaNI GCATC 1 cut(s) 383
Sfr274I CTCGAG 2 cut(s) 469, 524
Sfr303I CCGCGG 1 cut(s) 539
SfuI TTCGAA 1 cut(s) 118
SgrBI CCGCGG 1 cut(s) 539
SinI GGWCC 4 cut(s) 268, 337, 487, 493
SlaI CTCGAG 2 cut(s) 469, 524
SmaI CCCGGG 1 cut(s) 605
SmlI CTYRAG 2 cut(s) 469, 524
SmoI CTYRAG 2 cut(s) 469, 524
Sse9I AATT 2 cut(s) 137, 658
SspMI CTAG 1 cut(s) 44
StyD4I CCNGG 8 cut(s) 13, 147, 242, 312, 489, 565, 602, 603
StyI CCWWGG 1 cut(s) 385
TaaI ACNGT 4 cut(s) 23, 88, 617, 654
TaiI ACGT 4 cut(s) 156, 174, 192, 295
TaqI TCGA 6 cut(s) 67, 118, 470, 525, 619, 624
TaqII GACCGA 2 cut(s) 354, 390
TasI AATT 2 cut(s) 137, 658
TauI GCSGC 4 cut(s) 277, 320, 541, 557
TfiI GAWTC 2 cut(s) 126, 645
Tru1I TTAA 5 cut(s) 71, 134, 227, 657, 661
Tru9I TTAA 5 cut(s) 71, 134, 227, 657, 661
TseI GCWGC 1 cut(s) 529
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 3 cut(s) 434, 587, 649
TspMI CCCGGG 1 cut(s) 603
VpaK11BI GGWCC 4 cut(s) 268, 337, 487, 493
XapI RAATTY 1 cut(s) 137
XhoI CTCGAG 2 cut(s) 469, 524
XmaI CCCGGG 1 cut(s) 603
XmiI GTMKAC 1 cut(s) 619
XspI CTAG 1 cut(s) 44
ZraI GACGTC 1 cut(s) 190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.