Rroxscaffold_59G00442250

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000059
OG0000104
Physical Location & Seq
Reverse (-)
105141 .. 105903
763 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_59G00442250.1

Sequence Viewer

Length: 558 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

185

Amino Acids

19.41

Weight (kDa)

11.33

Isoelectric Point (pI)

45.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 202
AccBSI CCGCTC 2 cut(s) 56, 445
AccI GTMKAC 1 cut(s) 517
AccII CGCG 4 cut(s) 16, 223, 436, 455
AccIII TCCGGA 1 cut(s) 259
AclWI GGATC 2 cut(s) 333, 346
AcoI YGGCCR 2 cut(s) 57, 461
AfaI GTAC 2 cut(s) 291, 532
AfiI CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 319, 459, 466, 470
AgsI TTSAA 4 cut(s) 96, 110, 254, 511
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 2 cut(s) 33, 166
AluBI AGCT 1 cut(s) 427
AluI AGCT 1 cut(s) 427
Alw21I GWGCWC 1 cut(s) 213
Alw26I GTCTC 1 cut(s) 314
AlwI GGATC 2 cut(s) 333, 346
AlwNI CAGNNNCTG 1 cut(s) 202
Ama87I CYCGRG 4 cut(s) 349, 366, 422, 501
Aor13HI TCCGGA 1 cut(s) 259
AoxI GGCC 5 cut(s) 57, 112, 155, 246, 461
ApeKI GCWGC 2 cut(s) 25, 427
AspLEI GCGC 2 cut(s) 16, 239
AspS9I GGNCC 4 cut(s) 193, 247, 265, 385
AsuC2I CCSGG 5 cut(s) 48, 242, 465, 502, 503
AsuHPI GGTGA 1 cut(s) 425
AvaI CYCGRG 4 cut(s) 349, 366, 422, 501
AvaII GGWCC 3 cut(s) 193, 265, 385
BaeGI GKGCMC 1 cut(s) 380
BamHI GGATCC 1 cut(s) 338
Bbv12I GWGCWC 1 cut(s) 213
BbvI GCAGC 2 cut(s) 12, 414
BceAI ACGGC 3 cut(s) 44, 157, 190
BciT130I CCWGG 2 cut(s) 35, 168
BcnI CCSGG 5 cut(s) 48, 242, 465, 502, 503
BcoDI GTCTC 1 cut(s) 314
BglI GCCNNNNNGGC 1 cut(s) 245
BglII AGATCT 1 cut(s) 70
BisI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 428, 437, 453
BlpI GCTNAGC 1 cut(s) 178
BlsI GCNGC 8 cut(s) 18, 27, 58, 201, 247, 429, 438, 454
Bme1390I CCNGG 7 cut(s) 35, 48, 168, 242, 465, 502, 503
Bme18I GGWCC 3 cut(s) 193, 265, 385
BmeT110I CYCGRG 4 cut(s) 349, 366, 422, 501
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 4 cut(s) 193, 247, 265, 385
BmiI GGNNCC 5 cut(s) 131, 194, 340, 386, 387
BmrFI CCNGG 7 cut(s) 35, 48, 168, 242, 465, 502, 503
BmrI ACTGGG 2 cut(s) 383, 485
BmsI GCATC 1 cut(s) 311
BmuI ACTGGG 2 cut(s) 383, 485
Bpu1102I GCTNAGC 1 cut(s) 178
BpuMI CCSGG 5 cut(s) 48, 242, 465, 502, 503
BsaI GGTCTC 1 cut(s) 314
BsaJI CCNNGG 8 cut(s) 34, 166, 240, 313, 348, 434, 464, 501
BsaWI WCCGGW 2 cut(s) 231, 259
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 177, 207
Bsc4I CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 319, 459, 466, 470
Bse118I RCCGGY 2 cut(s) 283, 459
Bse1I ACTGG 3 cut(s) 389, 480, 532
BseAI TCCGGA 1 cut(s) 259
BseBI CCWGG 2 cut(s) 35, 168
BseDI CCNNGG 8 cut(s) 34, 166, 240, 313, 348, 434, 464, 501
BseLI CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 319, 459, 466, 470
BseMII CTCAG 2 cut(s) 192, 535
BseNI ACTGG 3 cut(s) 389, 480, 532
BseSI GKGCMC 1 cut(s) 380
BseX3I CGGCCG 2 cut(s) 57, 461
BseXI GCAGC 2 cut(s) 12, 414
BseYI CCCAGC 1 cut(s) 373
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 4 cut(s) 16, 223, 436, 455
Bsh1285I CGRYCG 4 cut(s) 23, 60, 288, 464
BshFI GGCC 5 cut(s) 59, 114, 157, 248, 463
BsiEI CGRYCG 4 cut(s) 23, 60, 288, 464
BsiHKAI GWGCWC 1 cut(s) 213
BsiHKCI CYCGRG 4 cut(s) 349, 366, 422, 501
BsiSI CCGG 9 cut(s) 47, 183, 232, 242, 260, 284, 460, 464, 502
BslFI GGGAC 3 cut(s) 371, 377, 482
BslI CCNNNNNNNGG 8 cut(s) 121, 173, 189, 202, 319, 459, 466, 470
BsmAI GTCTC 1 cut(s) 314
BsmFI GGGAC 3 cut(s) 371, 377, 482
BsnI GGCC 5 cut(s) 59, 114, 157, 248, 463
Bso31I GGTCTC 1 cut(s) 314
BsoBI CYCGRG 4 cut(s) 349, 366, 422, 501
Bsp1286I GDGCHC 2 cut(s) 213, 380
Bsp13I TCCGGA 1 cut(s) 259
Bsp143I GATC 2 cut(s) 70, 338
Bsp1720I GCTNAGC 1 cut(s) 178
BspANI GGCC 5 cut(s) 59, 114, 157, 248, 463
BspCNI CTCAG 2 cut(s) 191, 534
BspEI TCCGGA 1 cut(s) 259
BspFNI CGCG 4 cut(s) 16, 223, 436, 455
BspLI GGNNCC 5 cut(s) 131, 194, 340, 386, 387
BspPI GGATC 2 cut(s) 333, 346
BspQI GCTCTTC 1 cut(s) 201
BspTNI GGTCTC 1 cut(s) 314
BsrBI CCGCTC 2 cut(s) 56, 445
BsrFI RCCGGY 2 cut(s) 283, 459
BsrI ACTGG 3 cut(s) 389, 480, 532
BssAI RCCGGY 2 cut(s) 283, 459
BssECI CCNNGG 8 cut(s) 34, 166, 240, 313, 348, 434, 464, 501
BssMI GATC 2 cut(s) 70, 338
BssT1I CCWWGG 1 cut(s) 313
Bst2UI CCWGG 2 cut(s) 35, 168
Bst4CI ACNGT 2 cut(s) 515, 553
Bst6I CTCTTC 2 cut(s) 112, 201
BstC8I GCNNGC 3 cut(s) 159, 457, 461
BstDEI CTNAG 2 cut(s) 178, 521
BstDSI CCRYGG 1 cut(s) 434
BstFNI CGCG 4 cut(s) 16, 223, 436, 455
BstHHI GCGC 2 cut(s) 16, 239
BstKTI GATC 2 cut(s) 73, 341
BstMAI GTCTC 1 cut(s) 314
BstMBI GATC 2 cut(s) 70, 338
BstMCI CGRYCG 4 cut(s) 23, 60, 288, 464
BstNI CCWGG 2 cut(s) 35, 168
BstSCI CCNGG 7 cut(s) 33, 46, 166, 240, 463, 500, 501
BstSLI GKGCMC 1 cut(s) 380
BstUI CGCG 4 cut(s) 16, 223, 436, 455
BstV1I GCAGC 2 cut(s) 12, 414
BstX2I RGATCY 2 cut(s) 70, 338
BstYI RGATCY 2 cut(s) 70, 338
BstZI CGGCCG 2 cut(s) 57, 461
BsuRI GGCC 5 cut(s) 59, 114, 157, 248, 463
BtgI CCRYGG 1 cut(s) 434
BtrI CACGTC 1 cut(s) 219
Cac8I GCNNGC 3 cut(s) 159, 457, 461
CaiI CAGNNNCTG 1 cut(s) 202
CfoI GCGC 2 cut(s) 16, 239
Cfr10I RCCGGY 2 cut(s) 283, 459
Cfr13I GGNCC 4 cut(s) 193, 247, 265, 385
Cfr42I CCGCGG 1 cut(s) 437
Cfr9I CCCGGG 1 cut(s) 501
Csp6I GTAC 2 cut(s) 290, 531
CviAII CATG 2 cut(s) 134, 153
CviQI GTAC 2 cut(s) 290, 531
DdeI CTNAG 2 cut(s) 178, 521
DpnI GATC 2 cut(s) 72, 340
DpnII GATC 2 cut(s) 70, 338
EaeI YGGCCR 2 cut(s) 57, 461
EagI CGGCCG 2 cut(s) 57, 461
Eam1104I CTCTTC 2 cut(s) 112, 201
EarI CTCTTC 2 cut(s) 112, 201
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 2 cut(s) 57, 461
Eco130I CCWWGG 1 cut(s) 313
Eco31I GGTCTC 1 cut(s) 314
Eco47I GGWCC 3 cut(s) 193, 265, 385
Eco52I CGGCCG 2 cut(s) 57, 461
Eco88I CYCGRG 4 cut(s) 349, 366, 422, 501
EcoO109I RGGNCCY 1 cut(s) 385
EcoRII CCWGG 2 cut(s) 33, 166
EcoT14I CCWWGG 1 cut(s) 313
ErhI CCWWGG 1 cut(s) 313
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 3 cut(s) 135, 154, 296
FaqI GGGAC 3 cut(s) 371, 377, 482
FatI CATG 2 cut(s) 133, 152
FauI CCCGC 1 cut(s) 438
FblI GTMKAC 1 cut(s) 517
Fnu4HI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 428, 437, 453
Fsp4HI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 428, 437, 453
GlaI GCGC 2 cut(s) 15, 238
GluI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 428, 437, 453
GsaI CCCAGC 1 cut(s) 377
HaeIII GGCC 5 cut(s) 59, 114, 157, 248, 463
HapII CCGG 9 cut(s) 47, 183, 232, 242, 260, 284, 460, 464, 502
HhaI GCGC 2 cut(s) 16, 239
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 2 cut(s) 14, 237
HinP1I GCGC 2 cut(s) 14, 237
HincII GTYRAC 1 cut(s) 518
HindII GTYRAC 1 cut(s) 518
HinfI GANTC 2 cut(s) 519, 544
HpaII CCGG 9 cut(s) 47, 183, 232, 242, 260, 284, 460, 464, 502
HphI GGTGA 1 cut(s) 425
Hpy166II GTNNAC 3 cut(s) 139, 416, 518
Hpy188I TCNGA 2 cut(s) 524, 549
Hpy188III TCNNGA 3 cut(s) 260, 351, 394
Hpy8I GTNNAC 3 cut(s) 139, 416, 518
Hpy99I CGWCG 3 cut(s) 65, 223, 406
HpyAV CCTTC 2 cut(s) 104, 497
HpyCH4III ACNGT 2 cut(s) 515, 553
HpyCH4IV ACGT 1 cut(s) 218
HpyCH4V TGCA 3 cut(s) 28, 68, 150
HpyF3I CTNAG 2 cut(s) 178, 521
HpySE526I ACGT 1 cut(s) 218
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 2 cut(s) 14, 237
KflI GGGWCCC 1 cut(s) 385
Kpn2I TCCGGA 1 cut(s) 259
KroI GCCGGC 1 cut(s) 459
KroNI GCCGGC 1 cut(s) 461
KspI CCGCGG 1 cut(s) 437
Kzo9I GATC 2 cut(s) 70, 338
LguI GCTCTTC 1 cut(s) 201
LmnI GCTCC 2 cut(s) 53, 489
Lsp1109I GCAGC 2 cut(s) 12, 414
LweI GCATC 1 cut(s) 311
MaeII ACGT 1 cut(s) 218
MaeIII GTNAC 1 cut(s) 343
MalI GATC 2 cut(s) 72, 340
MbiI CCGCTC 2 cut(s) 56, 445
MboI GATC 2 cut(s) 70, 338
MboII GAAGA 2 cut(s) 129, 218
MflI RGATCY 2 cut(s) 70, 338
MhlI GDGCHC 2 cut(s) 213, 380
MlyI GAGTC 1 cut(s) 513
MnlI CCTC 6 cut(s) 3, 113, 179, 256, 358, 362
MroI TCCGGA 1 cut(s) 259
MroNI GCCGGC 1 cut(s) 459
MseI TTAA 1 cut(s) 556
MspA1I CMGCKG 2 cut(s) 199, 436
MspI CCGG 9 cut(s) 47, 183, 232, 242, 260, 284, 460, 464, 502
MspR9I CCNGG 7 cut(s) 35, 48, 168, 242, 465, 502, 503
MvaI CCWGG 2 cut(s) 35, 168
MvnI CGCG 4 cut(s) 16, 223, 436, 455
NaeI GCCGGC 1 cut(s) 461
NciI CCSGG 5 cut(s) 48, 242, 465, 502, 503
NdeII GATC 2 cut(s) 70, 338
NgoMIV GCCGGC 1 cut(s) 459
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 5 cut(s) 131, 194, 340, 386, 387
PaeR7I CTCGAG 2 cut(s) 366, 422
PciSI GCTCTTC 1 cut(s) 201
PdiI GCCGGC 1 cut(s) 461
PfeI GAWTC 1 cut(s) 544
PflMI CCANNNNNTGG 1 cut(s) 202
PkrI GCNGC 8 cut(s) 18, 27, 58, 201, 247, 429, 438, 454
PleI GAGTC 1 cut(s) 513
PpsI GAGTC 1 cut(s) 513
PpuMI RGGWCCY 1 cut(s) 385
Psp5II RGGWCCY 1 cut(s) 385
Psp6I CCWGG 2 cut(s) 33, 166
PspFI CCCAGC 1 cut(s) 373
PspGI CCWGG 2 cut(s) 33, 166
PspN4I GGNNCC 5 cut(s) 131, 194, 340, 386, 387
PspPI GGNCC 4 cut(s) 193, 247, 265, 385
PspPPI RGGWCCY 1 cut(s) 385
PspXI VCTCGAGB 2 cut(s) 366, 422
PstNI CAGNNNCTG 1 cut(s) 202
PsuI RGATCY 2 cut(s) 70, 338
RsaI GTAC 2 cut(s) 291, 532
RsaNI GTAC 2 cut(s) 290, 531
SacII CCGCGG 1 cut(s) 437
SalI GTCGAC 1 cut(s) 516
SapI GCTCTTC 1 cut(s) 201
SaqAI TTAA 1 cut(s) 556
SatI GCNGC 8 cut(s) 17, 26, 57, 200, 246, 428, 437, 453
Sau3AI GATC 2 cut(s) 70, 338
Sau96I GGNCC 4 cut(s) 193, 247, 265, 385
SchI GAGTC 1 cut(s) 513
ScrFI CCNGG 7 cut(s) 35, 48, 168, 242, 465, 502, 503
SduI GDGCHC 2 cut(s) 213, 380
SetI ASST 7 cut(s) 36, 131, 190, 221, 310, 350, 429
SfaNI GCATC 1 cut(s) 311
Sfr274I CTCGAG 2 cut(s) 366, 422
Sfr303I CCGCGG 1 cut(s) 437
SgrBI CCGCGG 1 cut(s) 437
SinI GGWCC 3 cut(s) 193, 265, 385
SlaI CTCGAG 2 cut(s) 366, 422
SmaI CCCGGG 1 cut(s) 503
SmlI CTYRAG 2 cut(s) 366, 422
SmoI CTYRAG 2 cut(s) 366, 422
SspI AATATT 1 cut(s) 92
StyD4I CCNGG 7 cut(s) 33, 46, 166, 240, 463, 500, 501
StyI CCWWGG 1 cut(s) 313
TaaI ACNGT 2 cut(s) 515, 553
TaiI ACGT 1 cut(s) 221
TaqI TCGA 3 cut(s) 367, 423, 517
TaqII GACCGA 1 cut(s) 282
TauI GCSGC 6 cut(s) 19, 59, 202, 248, 439, 455
TfiI GAWTC 1 cut(s) 544
Tru1I TTAA 1 cut(s) 556
Tru9I TTAA 1 cut(s) 556
TseI GCWGC 2 cut(s) 25, 427
TspGWI ACGGA 3 cut(s) 331, 486, 548
TspMI CCCGGG 1 cut(s) 501
Van91I CCANNNNNTGG 1 cut(s) 202
VpaK11BI GGWCC 3 cut(s) 193, 265, 385
XhoI CTCGAG 2 cut(s) 366, 422
XmaI CCCGGG 1 cut(s) 501
XmiI GTMKAC 1 cut(s) 517
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.