Rroxscaffold_21G00439470

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000021
OG0000104
Physical Location & Seq
Forward (+)
32273 .. 32891
619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_21G00439470.1

Sequence Viewer

Length: 603 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACACAGGGCGTGAGCCGGGCGGAGCGGCCGTCGGTGCGGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGAGGCGGGTAACCCCGTCGATAGCGCGTCTCGCGCGAACCGAAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGTGGTTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTACGTTTAACAGCCTGCCCACCACTGGAAACGGCTCGGCCGGAGGTAGGGTCCGGCGGCGGAAGAGCACCGCACGTCGCGTGGTGTCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCGGGTCTCCAAGGTGAACGACCTGCTGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

200

Amino Acids

20.94

Weight (kDa)

10.38

Isoelectric Point (pI)

49.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 483
AatII GACGTC 1 cut(s) 270
Acc36I ACCTGC 1 cut(s) 487
AccBSI CCGCTC 1 cut(s) 56
AccII CGCG 5 cut(s) 16, 181, 188, 190, 377
AccIII TCCGGA 2 cut(s) 260, 412
AclI AACGTT 1 cut(s) 249
AclWI GGATC 3 cut(s) 78, 519, 532
AcoI YGGCCR 2 cut(s) 57, 335
AcsI RAATTY 1 cut(s) 215
AcyI GRCGYC 1 cut(s) 267
AfaI GTAC 1 cut(s) 444
AfiI CCNNNNNNNGG 5 cut(s) 121, 226, 232, 322, 344
AgsI TTSAA 3 cut(s) 96, 110, 407
AjiI CACGTC 2 cut(s) 232, 373
Alw21I GWGCWC 1 cut(s) 367
Alw26I GTCTC 3 cut(s) 188, 258, 467
AlwI GGATC 3 cut(s) 78, 519, 532
Ama87I CYCGRG 3 cut(s) 281, 535, 552
Aor13HI TCCGGA 2 cut(s) 260, 412
AoxI GGCC 5 cut(s) 57, 112, 277, 335, 399
ApeKI GCWGC 1 cut(s) 25
ApoI RAATTY 1 cut(s) 215
AspLEI GCGC 4 cut(s) 16, 181, 190, 392
AspS9I GGNCC 5 cut(s) 277, 348, 400, 418, 572
AsuC2I CCSGG 3 cut(s) 48, 227, 395
AsuHPI GGTGA 1 cut(s) 482
AvaI CYCGRG 3 cut(s) 281, 535, 552
AvaII GGWCC 3 cut(s) 348, 418, 572
BaeGI GKGCMC 1 cut(s) 567
BamHI GGATCC 1 cut(s) 524
Bbv12I GWGCWC 1 cut(s) 367
BbvI GCAGC 1 cut(s) 12
BceAI ACGGC 4 cut(s) 44, 157, 259, 345
BcnI CCSGG 3 cut(s) 48, 227, 395
BcoDI GTCTC 3 cut(s) 188, 258, 467
BfuAI ACCTGC 1 cut(s) 487
BglI GCCNNNNNGGC 1 cut(s) 398
BisI GCNGC 5 cut(s) 17, 26, 57, 355, 399
BlsI GCNGC 5 cut(s) 18, 27, 58, 356, 400
Bme1390I CCNGG 3 cut(s) 48, 227, 395
Bme18I GGWCC 3 cut(s) 348, 418, 572
BmeT110I CYCGRG 3 cut(s) 281, 535, 552
BmgBI CACGTC 2 cut(s) 232, 373
BmgT120I GGNCC 5 cut(s) 277, 348, 400, 418, 572
BmiI GGNNCC 6 cut(s) 131, 278, 349, 526, 573, 574
BmrFI CCNGG 3 cut(s) 48, 227, 395
BmrI ACTGGG 1 cut(s) 570
BmsI GCATC 1 cut(s) 464
BmuI ACTGGG 1 cut(s) 570
BpuMI CCSGG 3 cut(s) 48, 227, 395
BsaHI GRCGYC 1 cut(s) 267
BsaI GGTCTC 1 cut(s) 467
BsaJI CCNNGG 4 cut(s) 280, 393, 466, 534
BsaWI WCCGGW 2 cut(s) 260, 412
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 332, 362
Bsc4I CCNNNNNNNGG 5 cut(s) 121, 226, 232, 322, 344
Bse118I RCCGGY 1 cut(s) 436
Bse1I ACTGG 2 cut(s) 327, 576
BseAI TCCGGA 2 cut(s) 260, 412
BseDI CCNNGG 4 cut(s) 280, 393, 466, 534
BseLI CCNNNNNNNGG 5 cut(s) 121, 226, 232, 322, 344
BseNI ACTGG 2 cut(s) 327, 576
BseSI GKGCMC 1 cut(s) 567
BseX3I CGGCCG 2 cut(s) 57, 335
BseXI GCAGC 1 cut(s) 12
BseYI CCCAGC 1 cut(s) 560
Bsh1236I CGCG 5 cut(s) 16, 181, 188, 190, 377
Bsh1285I CGRYCG 4 cut(s) 23, 60, 338, 441
BshFI GGCC 5 cut(s) 59, 114, 279, 337, 401
BsiEI CGRYCG 4 cut(s) 23, 60, 338, 441
BsiHKAI GWGCWC 1 cut(s) 367
BsiHKCI CYCGRG 3 cut(s) 281, 535, 552
BsiSI CCGG 8 cut(s) 47, 226, 261, 338, 351, 395, 413, 437
BslFI GGGAC 3 cut(s) 242, 558, 564
BslI CCNNNNNNNGG 5 cut(s) 121, 226, 232, 322, 344
BsmAI GTCTC 3 cut(s) 188, 258, 467
BsmBI CGTCTC 2 cut(s) 188, 258
BsmFI GGGAC 3 cut(s) 242, 558, 564
BsnI GGCC 5 cut(s) 59, 114, 279, 337, 401
Bso31I GGTCTC 1 cut(s) 467
BsoBI CYCGRG 3 cut(s) 281, 535, 552
Bsp1286I GDGCHC 2 cut(s) 367, 567
Bsp13I TCCGGA 2 cut(s) 260, 412
Bsp143I GATC 2 cut(s) 70, 524
BspANI GGCC 5 cut(s) 59, 114, 279, 337, 401
BspEI TCCGGA 2 cut(s) 260, 412
BspFNI CGCG 5 cut(s) 16, 181, 188, 190, 377
BspLI GGNNCC 6 cut(s) 131, 278, 349, 526, 573, 574
BspMI ACCTGC 1 cut(s) 487
BspPI GGATC 3 cut(s) 78, 519, 532
BspQI GCTCTTC 1 cut(s) 355
BspTNI GGTCTC 1 cut(s) 467
BsrBI CCGCTC 1 cut(s) 56
BsrFI RCCGGY 1 cut(s) 436
BsrI ACTGG 2 cut(s) 327, 576
BssAI RCCGGY 1 cut(s) 436
BssECI CCNNGG 4 cut(s) 280, 393, 466, 534
BssMI GATC 2 cut(s) 70, 524
BssNI GRCGYC 1 cut(s) 267
BssT1I CCWWGG 1 cut(s) 466
Bst6I CTCTTC 3 cut(s) 112, 281, 355
BstACI GRCGYC 1 cut(s) 267
BstC8I GCNNGC 1 cut(s) 313
BstEII GGTNACC 1 cut(s) 163
BstFNI CGCG 5 cut(s) 16, 181, 188, 190, 377
BstHHI GCGC 4 cut(s) 16, 181, 190, 392
BstKTI GATC 2 cut(s) 73, 527
BstMAI GTCTC 3 cut(s) 188, 258, 467
BstMBI GATC 2 cut(s) 70, 524
BstMCI CGRYCG 4 cut(s) 23, 60, 338, 441
BstMWI GCNNNNNNNGC 8 cut(s) 22, 25, 65, 185, 187, 398, 433, 557
BstPI GGTNACC 1 cut(s) 163
BstSCI CCNGG 3 cut(s) 46, 225, 393
BstSLI GKGCMC 1 cut(s) 567
BstUI CGCG 5 cut(s) 16, 181, 188, 190, 377
BstV1I GCAGC 1 cut(s) 12
BstX2I RGATCY 2 cut(s) 70, 524
BstYI RGATCY 2 cut(s) 70, 524
BstZI CGGCCG 2 cut(s) 57, 335
BsuRI GGCC 5 cut(s) 59, 114, 279, 337, 401
BtrI CACGTC 2 cut(s) 232, 373
BtsIMutI CAGTG 1 cut(s) 320
BveI ACCTGC 1 cut(s) 487
Cac8I GCNNGC 1 cut(s) 313
CfoI GCGC 4 cut(s) 16, 181, 190, 392
Cfr10I RCCGGY 1 cut(s) 436
Cfr13I GGNCC 5 cut(s) 277, 348, 400, 418, 572
CseI GACGC 1 cut(s) 170
Csp6I GTAC 1 cut(s) 443
CviAII CATG 2 cut(s) 134, 153
CviQI GTAC 1 cut(s) 443
DpnI GATC 2 cut(s) 72, 526
DpnII GATC 2 cut(s) 70, 524
DrdI GACNNNNNNGTC 1 cut(s) 483
DseDI GACNNNNNNGTC 1 cut(s) 483
EaeI YGGCCR 2 cut(s) 57, 335
EagI CGGCCG 2 cut(s) 57, 335
Eam1104I CTCTTC 3 cut(s) 112, 281, 355
EarI CTCTTC 3 cut(s) 112, 281, 355
EciI GGCGGA 2 cut(s) 66, 372
EclXI CGGCCG 2 cut(s) 57, 335
Eco130I CCWWGG 1 cut(s) 466
Eco31I GGTCTC 1 cut(s) 467
Eco47I GGWCC 3 cut(s) 348, 418, 572
Eco52I CGGCCG 2 cut(s) 57, 335
Eco88I CYCGRG 3 cut(s) 281, 535, 552
Eco91I GGTNACC 1 cut(s) 163
EcoO109I RGGNCCY 2 cut(s) 277, 572
EcoO65I GGTNACC 1 cut(s) 163
EcoT14I CCWWGG 1 cut(s) 466
ErhI CCWWGG 1 cut(s) 466
Esp3I CGTCTC 2 cut(s) 188, 258
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 3 cut(s) 135, 154, 449
FaqI GGGAC 3 cut(s) 242, 558, 564
FatI CATG 2 cut(s) 133, 152
FauI CCCGC 2 cut(s) 153, 266
Fnu4HI GCNGC 5 cut(s) 17, 26, 57, 355, 399
Fsp4HI GCNGC 5 cut(s) 17, 26, 57, 355, 399
GlaI GCGC 4 cut(s) 15, 180, 189, 391
GluI GCNGC 5 cut(s) 17, 26, 57, 355, 399
GsaI CCCAGC 1 cut(s) 564
HaeIII GGCC 5 cut(s) 59, 114, 279, 337, 401
HapII CCGG 8 cut(s) 47, 226, 261, 338, 351, 395, 413, 437
HgaI GACGC 1 cut(s) 170
HhaI GCGC 4 cut(s) 16, 181, 190, 392
Hin1I GRCGYC 1 cut(s) 267
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 4 cut(s) 14, 179, 188, 390
HinP1I GCGC 4 cut(s) 14, 179, 188, 390
HincII GTYRAC 1 cut(s) 241
HindII GTYRAC 1 cut(s) 241
HinfI GANTC 2 cut(s) 204, 257
HpaII CCGG 8 cut(s) 47, 226, 261, 338, 351, 395, 413, 437
HphI GGTGA 1 cut(s) 482
Hpy166II GTNNAC 3 cut(s) 139, 241, 473
Hpy188III TCNNGA 6 cut(s) 220, 261, 283, 413, 537, 581
Hpy8I GTNNAC 3 cut(s) 139, 241, 473
Hpy99I CGWCG 5 cut(s) 65, 175, 272, 377, 593
HpyAV CCTTC 1 cut(s) 104
HpyCH4IV ACGT 5 cut(s) 231, 249, 267, 301, 372
HpyCH4V TGCA 2 cut(s) 28, 150
HpyF10VI GCNNNNNNNGC 8 cut(s) 22, 25, 65, 185, 187, 398, 433, 557
HpySE526I ACGT 5 cut(s) 231, 249, 267, 301, 372
Hsp92I GRCGYC 1 cut(s) 267
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 4 cut(s) 14, 179, 188, 390
KflI GGGWCCC 1 cut(s) 572
Kpn2I TCCGGA 2 cut(s) 260, 412
Kzo9I GATC 2 cut(s) 70, 524
LguI GCTCTTC 1 cut(s) 355
LmnI GCTCC 1 cut(s) 53
Lsp1109I GCAGC 1 cut(s) 12
LweI GCATC 1 cut(s) 464
MaeII ACGT 5 cut(s) 231, 249, 267, 301, 372
MaeIII GTNAC 2 cut(s) 163, 529
MalI GATC 2 cut(s) 72, 526
MbiI CCGCTC 1 cut(s) 56
MboI GATC 2 cut(s) 70, 524
MboII GAAGA 3 cut(s) 129, 298, 372
MflI RGATCY 2 cut(s) 70, 524
MhlI GDGCHC 2 cut(s) 367, 567
MluCI AATT 1 cut(s) 215
MlyI GAGTC 1 cut(s) 266
MnlI CCTC 8 cut(s) 3, 113, 150, 290, 334, 409, 544, 548
MroI TCCGGA 2 cut(s) 260, 412
MseI TTAA 2 cut(s) 212, 305
MspI CCGG 8 cut(s) 47, 226, 261, 338, 351, 395, 413, 437
MspR9I CCNGG 3 cut(s) 48, 227, 395
MvnI CGCG 5 cut(s) 16, 181, 188, 190, 377
MwoI GCNNNNNNNGC 8 cut(s) 22, 25, 65, 185, 187, 398, 433, 557
NciI CCSGG 3 cut(s) 48, 227, 395
NdeII GATC 2 cut(s) 70, 524
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 6 cut(s) 131, 278, 349, 526, 573, 574
NmeAIII GCCGAG 1 cut(s) 313
PaeR7I CTCGAG 1 cut(s) 552
PciSI GCTCTTC 1 cut(s) 355
PcsI WCGNNNNNNNCGW 1 cut(s) 192
PfeI GAWTC 1 cut(s) 204
PkrI GCNGC 5 cut(s) 18, 27, 58, 356, 400
PleI GAGTC 1 cut(s) 265
PpsI GAGTC 1 cut(s) 265
PpuMI RGGWCCY 1 cut(s) 572
Psp1406I AACGTT 1 cut(s) 249
Psp5II RGGWCCY 1 cut(s) 572
PspEI GGTNACC 1 cut(s) 163
PspFI CCCAGC 1 cut(s) 560
PspN4I GGNNCC 6 cut(s) 131, 278, 349, 526, 573, 574
PspPI GGNCC 5 cut(s) 277, 348, 400, 418, 572
PspPPI RGGWCCY 1 cut(s) 572
PspXI VCTCGAGB 1 cut(s) 552
PsuI RGATCY 2 cut(s) 70, 524
RsaI GTAC 1 cut(s) 444
RsaNI GTAC 1 cut(s) 443
SapI GCTCTTC 1 cut(s) 355
SaqAI TTAA 2 cut(s) 212, 305
SatI GCNGC 5 cut(s) 17, 26, 57, 355, 399
Sau3AI GATC 2 cut(s) 70, 524
Sau96I GGNCC 5 cut(s) 277, 348, 400, 418, 572
SchI GAGTC 1 cut(s) 266
ScrFI CCNGG 3 cut(s) 48, 227, 395
SduI GDGCHC 2 cut(s) 367, 567
SfaNI GCATC 1 cut(s) 464
Sfr274I CTCGAG 1 cut(s) 552
SinI GGWCC 3 cut(s) 348, 418, 572
SlaI CTCGAG 1 cut(s) 552
SmlI CTYRAG 1 cut(s) 552
SmoI CTYRAG 1 cut(s) 552
Sse9I AATT 1 cut(s) 215
SspI AATATT 1 cut(s) 92
StyD4I CCNGG 3 cut(s) 46, 225, 393
StyI CCWWGG 1 cut(s) 466
TaiI ACGT 5 cut(s) 234, 252, 270, 304, 375
TaqI TCGA 2 cut(s) 173, 553
TaqII GACCGA 1 cut(s) 435
TasI AATT 1 cut(s) 215
TauI GCSGC 4 cut(s) 19, 59, 357, 401
TfiI GAWTC 1 cut(s) 204
Tru1I TTAA 2 cut(s) 212, 305
Tru9I TTAA 2 cut(s) 212, 305
TscAI CASTG 1 cut(s) 327
TseI GCWGC 1 cut(s) 25
TspGWI ACGGA 1 cut(s) 517
TspRI CASTG 1 cut(s) 327
VpaK11BI GGWCC 3 cut(s) 348, 418, 572
XapI RAATTY 1 cut(s) 215
XhoI CTCGAG 1 cut(s) 552
ZraI GACGTC 1 cut(s) 268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.