Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000092

Orthogroup ID

OG0000104

Physical Location & Seq

Genomic Coordinates Reverse (-)

65722 .. 66471

Gene Structure 750 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_92G00446540.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 639 bp

ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACACAGGGCGTGAGCCGGCGGAGCGGCCGTCGGTGCGGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGGAGTCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTACGTTTAACGACCTGCCCACGGAAACGGCTCGGCGGGAGGTAGGGTCCGGCGGCTGGAAGAGAGCACCGCACGTCGCGTGGTGTCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCGGTCTCCCAAGGTGAACGAGCCTGCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCCGTAACCTCGGGAAAAGGATTGGCTGCGAGCTGGGCACGGGGGTCCCGATCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCGCGGCGAGAGCGGGTCGCCGCGTGCGGCCGGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACGGTCGACTCGAACTGGTACGGACAAGGGGAATCCGACTGTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0001775 GO:0002252 GO:0002263 GO:0002274 GO:0002275 GO:0002283 GO:0002366 GO:0002376 GO:0002443 GO:0002444 GO:0002446 GO:0003674 GO:0003824 GO:0004553 GO:0004559 GO:0005575 GO:0005576 GO:0005615 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005766 GO:0005773 GO:0005775 GO:0005975 GO:0005996 GO:0006013 GO:0006464 GO:0006517 GO:0006807 GO:0006810 GO:0006887 GO:0006955 GO:0008150 GO:0008152 GO:0009056 GO:0009100 GO:0009311 GO:0009313 GO:0009987 GO:0012505 GO:0015923 GO:0016052 GO:0016192 GO:0016787 GO:0016798 GO:0019318 GO:0019538 GO:0030141 GO:0031410 GO:0031974 GO:0031982 GO:0031983 GO:0032940 GO:0034774 GO:0035578 GO:0036211 GO:0036230 GO:0042119 GO:0042582 GO:0043170 GO:0043202 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043299 GO:0043312 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044281 GO:0044421 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045055 GO:0045321 GO:0046903 GO:0050896 GO:0051179 GO:0051234 GO:0060205 GO:0070013 GO:0071704 GO:0097708 GO:0099503 GO:1901135 GO:1901564 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00511 map00511

Pfam Domains

Protein Families

Alpha-mann_mid Glyco_hydro_38 Glyco_hydro_38C

Protein Analysis

212

Amino Acids

23.22

Weight (kDa)

11.63

Isoelectric Point (pI)

72.3

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000104)

Species	Orthologous Gene IDs
pyrus_communis	pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii	Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Species

Orthologous Gene IDs

pyrus_communis

pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350

rosa_roxburghii

Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	169
Acc36I	ACCTGC	1 cut(s)	219
AccBSI	CCGCTC	2 cut(s)	55, 527
AccI	GTMKAC	1 cut(s)	599
AccII	CGCG	4 cut(s)	16, 275, 518, 537
AccIII	TCCGGA	1 cut(s)	310
AclWI	GGATC	4 cut(s)	77, 417, 430, 469
AcoI	YGGCCR	2 cut(s)	56, 542
AcyI	GRCGYC	1 cut(s)	166
AfaI	GTAC	2 cut(s)	342, 613
AfiI	CCNNNNNNNGG	2 cut(s)	217, 252
AgsI	TTSAA	4 cut(s)	95, 109, 305, 593
AjiI	CACGTC	1 cut(s)	271
AluBI	AGCT	2 cut(s)	457, 510
AluI	AGCT	2 cut(s)	457, 510
Alw21I	GWGCWC	1 cut(s)	265
Alw26I	GTCTC	2 cut(s)	157, 364
AlwI	GGATC	4 cut(s)	77, 417, 430, 469
Ama87I	CYCGRG	4 cut(s)	180, 434, 505, 583
Aor13HI	TCCGGA	1 cut(s)	310
AoxI	GGCC	5 cut(s)	56, 111, 176, 297, 542
ApeKI	GCWGC	3 cut(s)	25, 450, 510
AspLEI	GCGC	2 cut(s)	16, 290
AspS9I	GGNCC	5 cut(s)	176, 243, 298, 316, 469
AsuC2I	CCSGG	4 cut(s)	293, 546, 584, 585
AsuHPI	GGTGA	2 cut(s)	380, 508
AvaI	CYCGRG	4 cut(s)	180, 434, 505, 583
AvaII	GGWCC	3 cut(s)	243, 316, 469
BaeGI	GKGCMC	1 cut(s)	464
BamHI	GGATCC	1 cut(s)	422
Bbv12I	GWGCWC	1 cut(s)	265
BbvI	GCAGC	3 cut(s)	12, 437, 497
BceAI	ACGGC	3 cut(s)	43, 155, 240
BcnI	CCSGG	4 cut(s)	293, 546, 584, 585
BcoDI	GTCTC	2 cut(s)	157, 364
BfuAI	ACCTGC	1 cut(s)	219
BglI	GCCNNNNNGGC	1 cut(s)	296
Bme1390I	CCNGG	4 cut(s)	293, 546, 584, 585
Bme18I	GGWCC	3 cut(s)	243, 316, 469
BmeT110I	CYCGRG	4 cut(s)	180, 434, 505, 583
BmgBI	CACGTC	1 cut(s)	271
BmgT120I	GGNCC	5 cut(s)	176, 243, 298, 316, 469
BmiI	GGNNCC	6 cut(s)	129, 177, 244, 424, 470, 471
BmrFI	CCNGG	4 cut(s)	293, 546, 584, 585
BmrI	ACTGGG	1 cut(s)	567
BmsI	GCATC	1 cut(s)	362
BmuI	ACTGGG	1 cut(s)	567
BpuMI	CCSGG	4 cut(s)	293, 546, 584, 585
BsaHI	GRCGYC	1 cut(s)	166
BsaI	GGTCTC	1 cut(s)	364
BsaJI	CCNNGG	7 cut(s)	179, 216, 291, 364, 433, 545, 583
BsaWI	WCCGGW	1 cut(s)	310
BsaXI	ACNNNNNCTCC	4 cut(s)	44, 74, 227, 257
Bsc4I	CCNNNNNNNGG	2 cut(s)	217, 252
Bse118I	RCCGGY	2 cut(s)	46, 334
Bse1I	ACTGG	2 cut(s)	562, 613
BseAI	TCCGGA	1 cut(s)	310
BseDI	CCNNGG	7 cut(s)	179, 216, 291, 364, 433, 545, 583
BseLI	CCNNNNNNNGG	2 cut(s)	217, 252
BseNI	ACTGG	2 cut(s)	562, 613
BseSI	GKGCMC	1 cut(s)	464
BseX3I	CGGCCG	2 cut(s)	56, 542
BseXI	GCAGC	3 cut(s)	12, 437, 497
BseYI	CCCAGC	1 cut(s)	457
Bsh1236I	CGCG	4 cut(s)	16, 275, 518, 537
Bsh1285I	CGRYCG	5 cut(s)	23, 59, 339, 545, 599
BshFI	GGCC	5 cut(s)	58, 113, 178, 299, 544
BsiEI	CGRYCG	5 cut(s)	23, 59, 339, 545, 599
BsiHKAI	GWGCWC	1 cut(s)	265
BsiHKCI	CYCGRG	4 cut(s)	180, 434, 505, 583
BsiSI	CCGG	7 cut(s)	47, 246, 293, 311, 335, 545, 584
BslFI	GGGAC	2 cut(s)	455, 564
BslI	CCNNNNNNNGG	2 cut(s)	217, 252
BsmAI	GTCTC	2 cut(s)	157, 364
BsmBI	CGTCTC	1 cut(s)	157
BsmFI	GGGAC	2 cut(s)	455, 564
BsnI	GGCC	5 cut(s)	58, 113, 178, 299, 544
Bso31I	GGTCTC	1 cut(s)	364
BsoBI	CYCGRG	4 cut(s)	180, 434, 505, 583
Bsp1286I	GDGCHC	2 cut(s)	265, 464
Bsp13I	TCCGGA	1 cut(s)	310
Bsp143I	GATC	3 cut(s)	69, 422, 474
BspANI	GGCC	5 cut(s)	58, 113, 178, 299, 544
BspEI	TCCGGA	1 cut(s)	310
BspFNI	CGCG	4 cut(s)	16, 275, 518, 537
BspLI	GGNNCC	6 cut(s)	129, 177, 244, 424, 470, 471
BspMI	ACCTGC	1 cut(s)	219
BspPI	GGATC	4 cut(s)	77, 417, 430, 469
BspTNI	GGTCTC	1 cut(s)	364
BsrBI	CCGCTC	2 cut(s)	55, 527
BsrFI	RCCGGY	2 cut(s)	46, 334
BsrI	ACTGG	2 cut(s)	562, 613
BssAI	RCCGGY	2 cut(s)	46, 334
BssECI	CCNNGG	7 cut(s)	179, 216, 291, 364, 433, 545, 583
BssMI	GATC	3 cut(s)	69, 422, 474
BssNI	GRCGYC	1 cut(s)	166
BssT1I	CCWWGG	1 cut(s)	364
Bst4CI	ACNGT	2 cut(s)	597, 634
Bst6I	CTCTTC	3 cut(s)	111, 180, 251
BstACI	GRCGYC	1 cut(s)	166
BstC8I	GCNNGC	4 cut(s)	48, 379, 455, 539
BstDSI	CCRYGG	1 cut(s)	216
BstFNI	CGCG	4 cut(s)	16, 275, 518, 537
BstHHI	GCGC	2 cut(s)	16, 290
BstKTI	GATC	3 cut(s)	72, 425, 477
BstMAI	GTCTC	2 cut(s)	157, 364
BstMBI	GATC	3 cut(s)	69, 422, 474
BstMCI	CGRYCG	5 cut(s)	23, 59, 339, 545, 599
BstMWI	GCNNNNNNNGC	9 cut(s)	22, 25, 52, 64, 296, 331, 459, 510, 524
BstSCI	CCNGG	4 cut(s)	291, 544, 582, 583
BstSLI	GKGCMC	1 cut(s)	464
BstUI	CGCG	4 cut(s)	16, 275, 518, 537
BstV1I	GCAGC	3 cut(s)	12, 437, 497
BstX2I	RGATCY	2 cut(s)	69, 422
BstYI	RGATCY	2 cut(s)	69, 422
BstZI	CGGCCG	2 cut(s)	56, 542
BsuRI	GGCC	5 cut(s)	58, 113, 178, 299, 544
BtgI	CCRYGG	1 cut(s)	216
BtrI	CACGTC	1 cut(s)	271
BveI	ACCTGC	1 cut(s)	219
Cac8I	GCNNGC	4 cut(s)	48, 379, 455, 539
CfoI	GCGC	2 cut(s)	16, 290
Cfr10I	RCCGGY	2 cut(s)	46, 334
Cfr13I	GGNCC	5 cut(s)	176, 243, 298, 316, 469
Cfr9I	CCCGGG	1 cut(s)	583
Csp6I	GTAC	2 cut(s)	341, 612
CviAII	CATG	2 cut(s)	132, 151
CviQI	GTAC	2 cut(s)	341, 612
DpnI	GATC	3 cut(s)	71, 424, 476
DpnII	GATC	3 cut(s)	69, 422, 474
EaeI	YGGCCR	2 cut(s)	56, 542
EagI	CGGCCG	2 cut(s)	56, 542
Eam1104I	CTCTTC	3 cut(s)	111, 180, 251
EarI	CTCTTC	3 cut(s)	111, 180, 251
EciI	GGCGGA	1 cut(s)	65
EclXI	CGGCCG	2 cut(s)	56, 542
Eco130I	CCWWGG	1 cut(s)	364
Eco31I	GGTCTC	1 cut(s)	364
Eco47I	GGWCC	3 cut(s)	243, 316, 469
Eco52I	CGGCCG	2 cut(s)	56, 542
Eco88I	CYCGRG	4 cut(s)	180, 434, 505, 583
EcoO109I	RGGNCCY	2 cut(s)	176, 469
EcoT14I	CCWWGG	1 cut(s)	364
ErhI	CCWWGG	1 cut(s)	364
Esp3I	CGTCTC	1 cut(s)	157
FaeI	CATG	2 cut(s)	135, 154
FaiI	YATR	3 cut(s)	133, 152, 347
FaqI	GGGAC	2 cut(s)	455, 564
FatI	CATG	2 cut(s)	131, 150
FauI	CCCGC	3 cut(s)	165, 225, 520
FblI	GTMKAC	1 cut(s)	599
GlaI	GCGC	2 cut(s)	15, 289
GsaI	CCCAGC	1 cut(s)	461
HaeIII	GGCC	5 cut(s)	58, 113, 178, 299, 544
HapII	CCGG	7 cut(s)	47, 246, 293, 311, 335, 545, 584
HhaI	GCGC	2 cut(s)	16, 290
Hin1I	GRCGYC	1 cut(s)	166
Hin1II	CATG	2 cut(s)	135, 154
Hin6I	GCGC	2 cut(s)	14, 288
HinP1I	GCGC	2 cut(s)	14, 288
HincII	GTYRAC	1 cut(s)	600
HindII	GTYRAC	1 cut(s)	600
HinfI	GANTC	3 cut(s)	157, 601, 625
HpaII	CCGG	7 cut(s)	47, 246, 293, 311, 335, 545, 584
HphI	GGTGA	2 cut(s)	380, 508
Hpy166II	GTNNAC	4 cut(s)	137, 371, 499, 600
Hpy188I	TCNGA	3 cut(s)	162, 479, 630
Hpy188III	TCNNGA	4 cut(s)	182, 311, 436, 472
Hpy8I	GTNNAC	4 cut(s)	137, 371, 499, 600
Hpy99I	CGWCG	4 cut(s)	64, 171, 275, 489
HpyAV	CCTTC	2 cut(s)	103, 579
HpyCH4III	ACNGT	2 cut(s)	597, 634
HpyCH4IV	ACGT	3 cut(s)	166, 200, 270
HpyCH4V	TGCA	2 cut(s)	28, 148
HpyF10VI	GCNNNNNNNGC	9 cut(s)	22, 25, 52, 64, 296, 331, 459, 510, 524
HpySE526I	ACGT	3 cut(s)	166, 200, 270
Hsp92I	GRCGYC	1 cut(s)	166
Hsp92II	CATG	2 cut(s)	135, 154
HspAI	GCGC	2 cut(s)	14, 288
KflI	GGGWCCC	1 cut(s)	469
Kpn2I	TCCGGA	1 cut(s)	310
KroI	GCCGGC	1 cut(s)	46
KroNI	GCCGGC	1 cut(s)	48
Kzo9I	GATC	3 cut(s)	69, 422, 474
LmnI	GCTCC	2 cut(s)	52, 571
Lsp1109I	GCAGC	3 cut(s)	12, 437, 497
LweI	GCATC	1 cut(s)	362
MaeII	ACGT	3 cut(s)	166, 200, 270
MaeIII	GTNAC	1 cut(s)	428
MalI	GATC	3 cut(s)	71, 424, 476
MbiI	CCGCTC	2 cut(s)	55, 527
MboI	GATC	3 cut(s)	69, 422, 474
MboII	GAAGA	3 cut(s)	128, 197, 268
MflI	RGATCY	2 cut(s)	69, 422
MhlI	GDGCHC	2 cut(s)	265, 464
MlyI	GAGTC	2 cut(s)	166, 595
MmeI	TCCRAC	1 cut(s)	140
MnlI	CCTC	6 cut(s)	3, 112, 189, 229, 307, 443
MroI	TCCGGA	1 cut(s)	310
MroNI	GCCGGC	1 cut(s)	46
MseI	TTAA	2 cut(s)	204, 637
MspI	CCGG	7 cut(s)	47, 246, 293, 311, 335, 545, 584
MspR9I	CCNGG	4 cut(s)	293, 546, 584, 585
MvnI	CGCG	4 cut(s)	16, 275, 518, 537
MwoI	GCNNNNNNNGC	9 cut(s)	22, 25, 52, 64, 296, 331, 459, 510, 524
NaeI	GCCGGC	1 cut(s)	48
NciI	CCSGG	4 cut(s)	293, 546, 584, 585
NdeII	GATC	3 cut(s)	69, 422, 474
NgoMIV	GCCGGC	1 cut(s)	46
NlaIII	CATG	2 cut(s)	135, 154
NlaIV	GGNNCC	6 cut(s)	129, 177, 244, 424, 470, 471
NmeAIII	GCCGAG	1 cut(s)	208
PaeR7I	CTCGAG	1 cut(s)	505
PcsI	WCGNNNNNNNCGW	2 cut(s)	470, 601
PdiI	GCCGGC	1 cut(s)	48
PfeI	GAWTC	1 cut(s)	625
PleI	GAGTC	2 cut(s)	165, 595
PpsI	GAGTC	2 cut(s)	165, 595
PpuMI	RGGWCCY	1 cut(s)	469
Psp5II	RGGWCCY	1 cut(s)	469
PspFI	CCCAGC	1 cut(s)	457
PspN4I	GGNNCC	6 cut(s)	129, 177, 244, 424, 470, 471
PspPI	GGNCC	5 cut(s)	176, 243, 298, 316, 469
PspPPI	RGGWCCY	1 cut(s)	469
PspXI	VCTCGAGB	1 cut(s)	505
PsuI	RGATCY	2 cut(s)	69, 422
RsaI	GTAC	2 cut(s)	342, 613
RsaNI	GTAC	2 cut(s)	341, 612
SalI	GTCGAC	1 cut(s)	598
SaqAI	TTAA	2 cut(s)	204, 637
Sau3AI	GATC	3 cut(s)	69, 422, 474
Sau96I	GGNCC	5 cut(s)	176, 243, 298, 316, 469
SchI	GAGTC	2 cut(s)	166, 595
ScrFI	CCNGG	4 cut(s)	293, 546, 584, 585
SduI	GDGCHC	2 cut(s)	265, 464
SfaNI	GCATC	1 cut(s)	362
Sfr274I	CTCGAG	1 cut(s)	505
SinI	GGWCC	3 cut(s)	243, 316, 469
SlaI	CTCGAG	1 cut(s)	505
SmaI	CCCGGG	1 cut(s)	585
SmlI	CTYRAG	1 cut(s)	505
SmoI	CTYRAG	1 cut(s)	505
SspI	AATATT	1 cut(s)	91
StyD4I	CCNGG	4 cut(s)	291, 544, 582, 583
StyI	CCWWGG	1 cut(s)	364
TaaI	ACNGT	2 cut(s)	597, 634
TaiI	ACGT	3 cut(s)	169, 203, 273
TaqI	TCGA	3 cut(s)	506, 599, 604
TaqII	GACCGA	2 cut(s)	333, 346
TauI	GCSGC	7 cut(s)	19, 58, 252, 299, 521, 537, 544
TfiI	GAWTC	1 cut(s)	625
Tru1I	TTAA	2 cut(s)	204, 637
Tru9I	TTAA	2 cut(s)	204, 637
TseI	GCWGC	3 cut(s)	25, 450, 510
TspGWI	ACGGA	3 cut(s)	233, 568, 629
TspMI	CCCGGG	1 cut(s)	583
VpaK11BI	GGWCC	3 cut(s)	243, 316, 469
XhoI	CTCGAG	1 cut(s)	505
XmaI	CCCGGG	1 cut(s)	583
XmiI	GTMKAC	1 cut(s)	599
ZraI	GACGTC	1 cut(s)	167

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.