Rroxscaffold_104G00444710

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000104
OG0000104
Physical Location & Seq
Forward (+)
21977 .. 25135
3159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_104G00444710.1

Sequence Viewer

Length: 858 bp
ATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCTGGTAACGGCCTGCGGGCTCCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGTGATTAAACCCGTAAGGCGCAAGGAAGCTAATGTGCGGGATCCCTTTGCGGGTGCACCGCCGACCGACCTTGATCTTCGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGACGGCGTGGCTGCTTTGTTGAGCCACGCCAAGGAATCGAGAGCTCCAAGTGGGCCATTTTTGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACAGTCGACTCAGAACTGACGCTTCCTAACGAATGCGATGCCAAGCCAAGGCTAGGCAATGCCGTGGCTGACAGAGGCTTCCTAGCGAAGGATAATGCAATGCCGAGCCAAGGCTTTGCCAAGACAATGCCAAGGCTTGCTAGTGAGGCTAATGCAATGTCAAGCCAAGGCTTGCCAAGACAATGCCAAGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

285

Amino Acids

30.81

Weight (kDa)

9.84

Isoelectric Point (pI)

54.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 103
AccB7I CCANNNNNTGG 1 cut(s) 436
AccBSI CCGCTC 2 cut(s) 270, 597
AccI GTMKAC 1 cut(s) 669
AccII CGCG 3 cut(s) 457, 588, 607
AclWI GGATC 4 cut(s) 164, 177, 484, 497
AcoI YGGCCR 1 cut(s) 613
AflIII ACRYGT 1 cut(s) 111
AgsI TTSAA 2 cut(s) 89, 663
AjiI CACGTC 2 cut(s) 319, 453
AjnI CCWGG 2 cut(s) 49, 400
AluBI AGCT 3 cut(s) 158, 371, 579
AluI AGCT 3 cut(s) 158, 371, 579
Alw21I GWGCWC 4 cut(s) 49, 187, 373, 447
Alw26I GTCTC 1 cut(s) 26
Alw44I GTGCAC 1 cut(s) 183
AlwI GGATC 4 cut(s) 164, 177, 484, 497
AlwNI CAGNNNCTG 1 cut(s) 436
Ama87I CYCGRG 3 cut(s) 500, 574, 653
AoxI GGCC 5 cut(s) 58, 78, 300, 380, 613
ApaLI GTGCAC 1 cut(s) 183
ApeKI GCWGC 5 cut(s) 9, 306, 338, 516, 579
AspLEI GCGC 2 cut(s) 18, 150
AspS9I GGNCC 7 cut(s) 79, 96, 241, 301, 380, 427, 537
AsuC2I CCSGG 3 cut(s) 617, 654, 655
AsuHPI GGTGA 3 cut(s) 142, 266, 577
AvaI CYCGRG 3 cut(s) 500, 574, 653
AvaII GGWCC 4 cut(s) 96, 241, 427, 537
BaeGI GKGCMC 2 cut(s) 187, 532
BaeI ACNNNNGTAYC 2 cut(s) 303, 336
BamHI GGATCC 2 cut(s) 169, 489
BanII GRGCYC 2 cut(s) 70, 373
Bbv12I GWGCWC 4 cut(s) 49, 187, 373, 447
BbvI GCAGC 5 cut(s) 21, 318, 325, 503, 566
BccI CCATC 1 cut(s) 245
BceAI ACGGC 5 cut(s) 3, 73, 346, 424, 710
BcgI CGANNNNNNTGC 4 cut(s) 218, 252, 683, 717
BciT130I CCWGG 2 cut(s) 51, 402
BcnI CCSGG 3 cut(s) 617, 654, 655
BcoDI GTCTC 1 cut(s) 26
BfaI CTAG 4 cut(s) 716, 746, 804, 856
BglI GCCNNNNNGGC 1 cut(s) 24
BisI GCNGC 8 cut(s) 10, 307, 339, 434, 517, 580, 589, 605
BlpI GCTNAGC 1 cut(s) 412
BlsI GCNGC 8 cut(s) 11, 308, 340, 435, 518, 581, 590, 606
Bme1390I CCNGG 5 cut(s) 51, 402, 617, 654, 655
Bme18I GGWCC 4 cut(s) 96, 241, 427, 537
BmeT110I CYCGRG 3 cut(s) 500, 574, 653
BmgBI CACGTC 2 cut(s) 319, 453
BmgT120I GGNCC 7 cut(s) 79, 96, 241, 301, 380, 427, 537
BmiI GGNNCC 8 cut(s) 69, 171, 242, 243, 428, 491, 538, 539
BmrFI CCNGG 5 cut(s) 51, 402, 617, 654, 655
BmrI ACTGGG 2 cut(s) 535, 637
BmsI GCATC 2 cut(s) 46, 691
BmuI ACTGGG 2 cut(s) 535, 637
Bpu10I CCTNAGC 1 cut(s) 266
Bpu1102I GCTNAGC 1 cut(s) 412
BpuMI CCSGG 3 cut(s) 617, 654, 655
BsaXI ACNNNNNCTCC 2 cut(s) 411, 441
Bse118I RCCGGY 1 cut(s) 611
Bse1I ACTGG 2 cut(s) 541, 632
Bse3DI GCAATG 3 cut(s) 727, 768, 825
BseBI CCWGG 2 cut(s) 51, 402
BseMI GCAATG 3 cut(s) 727, 768, 825
BseMII CTCAG 3 cut(s) 257, 426, 687
BseNI ACTGG 2 cut(s) 541, 632
BseSI GKGCMC 2 cut(s) 187, 532
BseX3I CGGCCG 1 cut(s) 613
BseXI GCAGC 5 cut(s) 21, 318, 325, 503, 566
BseYI CCCAGC 1 cut(s) 525
Bsh1236I CGCG 3 cut(s) 457, 588, 607
Bsh1285I CGRYCG 2 cut(s) 195, 616
BshFI GGCC 5 cut(s) 60, 80, 302, 382, 615
BsiEI CGRYCG 2 cut(s) 195, 616
BsiHKAI GWGCWC 4 cut(s) 49, 187, 373, 447
BsiHKCI CYCGRG 3 cut(s) 500, 574, 653
BsiSI CCGG 5 cut(s) 417, 466, 612, 616, 654
BslFI GGGAC 4 cut(s) 254, 523, 529, 634
BsmAI GTCTC 1 cut(s) 26
BsmBI CGTCTC 1 cut(s) 26
BsmFI GGGAC 4 cut(s) 254, 523, 529, 634
BsmI GAATGC 1 cut(s) 701
BsnI GGCC 5 cut(s) 60, 80, 302, 382, 615
BsoBI CYCGRG 3 cut(s) 500, 574, 653
Bsp1286I GDGCHC 6 cut(s) 49, 70, 187, 373, 447, 532
Bsp143I GATC 3 cut(s) 169, 202, 489
Bsp1720I GCTNAGC 1 cut(s) 412
BspANI GGCC 5 cut(s) 60, 80, 302, 382, 615
BspCNI CTCAG 3 cut(s) 258, 425, 686
BspFNI CGCG 3 cut(s) 457, 588, 607
BspLI GGNNCC 8 cut(s) 69, 171, 242, 243, 428, 491, 538, 539
BspPI GGATC 4 cut(s) 164, 177, 484, 497
BspQI GCTCTTC 1 cut(s) 435
BsrBI CCGCTC 2 cut(s) 270, 597
BsrDI GCAATG 3 cut(s) 727, 768, 825
BsrFI RCCGGY 1 cut(s) 611
BsrI ACTGG 2 cut(s) 541, 632
BssAI RCCGGY 1 cut(s) 611
BssMI GATC 3 cut(s) 169, 202, 489
BssT1I CCWWGG 7 cut(s) 99, 357, 710, 772, 794, 829, 850
Bst2UI CCWGG 2 cut(s) 51, 402
Bst4CI ACNGT 1 cut(s) 667
Bst6I CTCTTC 1 cut(s) 435
BstDEI CTNAG 3 cut(s) 266, 412, 673
BstDSI CCRYGG 2 cut(s) 586, 726
BstENI CCTNNNNNAGG 1 cut(s) 749
BstFNI CGCG 3 cut(s) 457, 588, 607
BstHHI GCGC 2 cut(s) 18, 150
BstKTI GATC 3 cut(s) 172, 205, 492
BstMAI GTCTC 1 cut(s) 26
BstMBI GATC 3 cut(s) 169, 202, 489
BstMCI CGRYCG 2 cut(s) 195, 616
BstNI CCWGG 2 cut(s) 51, 402
BstNSI RCATGY 3 cut(s) 16, 115, 233
BstSCI CCNGG 5 cut(s) 49, 400, 615, 652, 653
BstSLI GKGCMC 2 cut(s) 187, 532
BstUI CGCG 3 cut(s) 457, 588, 607
BstV1I GCAGC 5 cut(s) 21, 318, 325, 503, 566
BstX2I RGATCY 2 cut(s) 169, 489
BstYI RGATCY 2 cut(s) 169, 489
BstZI CGGCCG 1 cut(s) 613
BsuRI GGCC 5 cut(s) 60, 80, 302, 382, 615
BtgI CCRYGG 2 cut(s) 586, 726
BtgZI GCGATG 1 cut(s) 714
BtrI CACGTC 2 cut(s) 319, 453
CaiI CAGNNNCTG 1 cut(s) 436
CfoI GCGC 2 cut(s) 18, 150
Cfr10I RCCGGY 1 cut(s) 611
Cfr13I GGNCC 7 cut(s) 79, 96, 241, 301, 380, 427, 537
Cfr42I CCGCGG 1 cut(s) 589
Cfr9I CCCGGG 1 cut(s) 653
CseI GACGC 1 cut(s) 691
CviAII CATG 3 cut(s) 13, 112, 230
DdeI CTNAG 3 cut(s) 266, 412, 673
DpnI GATC 3 cut(s) 171, 204, 491
DpnII GATC 3 cut(s) 169, 202, 489
DrdI GACNNNNNNGTC 1 cut(s) 103
DseDI GACNNNNNNGTC 1 cut(s) 103
EaeI YGGCCR 1 cut(s) 613
EagI CGGCCG 1 cut(s) 613
Eam1104I CTCTTC 1 cut(s) 435
EarI CTCTTC 1 cut(s) 435
Ecl136II GAGCTC 1 cut(s) 371
EclXI CGGCCG 1 cut(s) 613
Eco130I CCWWGG 7 cut(s) 99, 357, 710, 772, 794, 829, 850
Eco24I GRGCYC 2 cut(s) 70, 373
Eco47I GGWCC 4 cut(s) 96, 241, 427, 537
Eco52I CGGCCG 1 cut(s) 613
Eco53kI GAGCTC 1 cut(s) 371
Eco88I CYCGRG 3 cut(s) 500, 574, 653
EcoICRI GAGCTC 1 cut(s) 371
EcoNI CCTNNNNNAGG 1 cut(s) 749
EcoO109I RGGNCCY 2 cut(s) 241, 537
EcoRII CCWGG 2 cut(s) 49, 400
EcoT14I CCWWGG 7 cut(s) 99, 357, 710, 772, 794, 829, 850
EcoT38I GRGCYC 2 cut(s) 70, 373
ErhI CCWWGG 7 cut(s) 99, 357, 710, 772, 794, 829, 850
Esp3I CGTCTC 1 cut(s) 26
FaeI CATG 3 cut(s) 16, 115, 233
FaiI YATR 4 cut(s) 14, 113, 231, 262
FaqI GGGAC 4 cut(s) 254, 523, 529, 634
FatI CATG 3 cut(s) 12, 111, 229
FauI CCCGC 6 cut(s) 57, 159, 172, 263, 311, 590
FblI GTMKAC 1 cut(s) 669
Fnu4HI GCNGC 8 cut(s) 10, 307, 339, 434, 517, 580, 589, 605
FriOI GRGCYC 2 cut(s) 70, 373
Fsp4HI GCNGC 8 cut(s) 10, 307, 339, 434, 517, 580, 589, 605
FspBI CTAG 4 cut(s) 716, 746, 804, 856
GlaI GCGC 2 cut(s) 17, 149
GluI GCNGC 8 cut(s) 10, 307, 339, 434, 517, 580, 589, 605
GsaI CCCAGC 1 cut(s) 529
HaeIII GGCC 5 cut(s) 60, 80, 302, 382, 615
HapII CCGG 5 cut(s) 417, 466, 612, 616, 654
HgaI GACGC 1 cut(s) 691
HhaI GCGC 2 cut(s) 18, 150
Hin1II CATG 3 cut(s) 16, 115, 233
Hin6I GCGC 2 cut(s) 16, 148
HinP1I GCGC 2 cut(s) 16, 148
HincII GTYRAC 2 cut(s) 125, 670
HindII GTYRAC 2 cut(s) 125, 670
HinfI GANTC 4 cut(s) 104, 121, 362, 671
HpaII CCGG 5 cut(s) 417, 466, 612, 616, 654
HphI GGTGA 3 cut(s) 142, 266, 577
Hpy166II GTNNAC 5 cut(s) 125, 185, 257, 568, 670
Hpy188I TCNGA 2 cut(s) 109, 676
Hpy188III TCNNGA 6 cut(s) 86, 209, 239, 366, 502, 546
Hpy8I GTNNAC 5 cut(s) 125, 185, 257, 568, 670
Hpy99I CGWCG 3 cut(s) 332, 457, 558
HpyAV CCTTC 3 cut(s) 206, 649, 745
HpyCH4III ACNGT 1 cut(s) 667
HpyCH4IV ACGT 2 cut(s) 318, 452
HpyCH4V TGCA 4 cut(s) 185, 322, 761, 818
HpyF3I CTNAG 3 cut(s) 266, 412, 673
HpySE526I ACGT 2 cut(s) 318, 452
Hsp92II CATG 3 cut(s) 16, 115, 233
HspAI GCGC 2 cut(s) 16, 148
KflI GGGWCCC 2 cut(s) 241, 537
KroI GCCGGC 1 cut(s) 611
KroNI GCCGGC 1 cut(s) 613
KspI CCGCGG 1 cut(s) 589
Kzo9I GATC 3 cut(s) 169, 202, 489
LguI GCTCTTC 1 cut(s) 435
LmnI GCTCC 4 cut(s) 52, 73, 376, 641
Lsp1109I GCAGC 5 cut(s) 21, 318, 325, 503, 566
LweI GCATC 2 cut(s) 46, 691
MaeI CTAG 4 cut(s) 716, 746, 804, 856
MaeII ACGT 2 cut(s) 318, 452
MaeIII GTNAC 2 cut(s) 53, 494
MalI GATC 3 cut(s) 171, 204, 491
MbiI CCGCTC 2 cut(s) 270, 597
MboI GATC 3 cut(s) 169, 202, 489
MboII GAAGA 2 cut(s) 197, 452
MflI RGATCY 2 cut(s) 169, 489
MhlI GDGCHC 6 cut(s) 49, 70, 187, 373, 447, 532
MlyI GAGTC 3 cut(s) 113, 130, 665
MnlI CCTC 7 cut(s) 277, 292, 413, 509, 514, 731, 802
MroNI GCCGGC 1 cut(s) 611
MseI TTAA 1 cut(s) 135
MslI CAYNNNNRTG 1 cut(s) 42
MspA1I CMGCKG 2 cut(s) 433, 588
MspI CCGG 5 cut(s) 417, 466, 612, 616, 654
MspR9I CCNGG 5 cut(s) 51, 402, 617, 654, 655
Mva1269I GAATGC 1 cut(s) 701
MvaI CCWGG 2 cut(s) 51, 402
MvnI CGCG 3 cut(s) 457, 588, 607
NaeI GCCGGC 1 cut(s) 613
NciI CCSGG 3 cut(s) 617, 654, 655
NdeII GATC 3 cut(s) 169, 202, 489
NgoMIV GCCGGC 1 cut(s) 611
NlaIII CATG 3 cut(s) 16, 115, 233
NlaIV GGNNCC 8 cut(s) 69, 171, 242, 243, 428, 491, 538, 539
NmeAIII GCCGAG 1 cut(s) 792
NspI RCATGY 3 cut(s) 16, 115, 233
PaeI GCATGC 2 cut(s) 16, 233
PaeR7I CTCGAG 1 cut(s) 574
PciI ACATGT 1 cut(s) 111
PciSI GCTCTTC 1 cut(s) 435
PcsI WCGNNNNNNNCGW 2 cut(s) 40, 324
PctI GAATGC 1 cut(s) 701
PdiI GCCGGC 1 cut(s) 613
PfeI GAWTC 1 cut(s) 362
PflMI CCANNNNNTGG 1 cut(s) 436
PkrI GCNGC 8 cut(s) 11, 308, 340, 435, 518, 581, 590, 606
PleI GAGTC 3 cut(s) 112, 129, 665
PpsI GAGTC 3 cut(s) 112, 129, 665
PpuMI RGGWCCY 2 cut(s) 241, 537
PscI ACATGT 1 cut(s) 111
Psp124BI GAGCTC 1 cut(s) 373
Psp5II RGGWCCY 2 cut(s) 241, 537
Psp6I CCWGG 2 cut(s) 49, 400
PspFI CCCAGC 1 cut(s) 525
PspGI CCWGG 2 cut(s) 49, 400
PspN4I GGNNCC 8 cut(s) 69, 171, 242, 243, 428, 491, 538, 539
PspPI GGNCC 7 cut(s) 79, 96, 241, 301, 380, 427, 537
PspPPI RGGWCCY 2 cut(s) 241, 537
PspXI VCTCGAGB 1 cut(s) 574
PstNI CAGNNNCTG 1 cut(s) 436
PsuI RGATCY 2 cut(s) 169, 489
RseI CAYNNNNRTG 1 cut(s) 42
SacI GAGCTC 1 cut(s) 373
SacII CCGCGG 1 cut(s) 589
SalI GTCGAC 1 cut(s) 668
SapI GCTCTTC 1 cut(s) 435
SaqAI TTAA 1 cut(s) 135
SatI GCNGC 8 cut(s) 10, 307, 339, 434, 517, 580, 589, 605
Sau3AI GATC 3 cut(s) 169, 202, 489
Sau96I GGNCC 7 cut(s) 79, 96, 241, 301, 380, 427, 537
SchI GAGTC 3 cut(s) 113, 130, 665
ScrFI CCNGG 5 cut(s) 51, 402, 617, 654, 655
SduI GDGCHC 6 cut(s) 49, 70, 187, 373, 447, 532
SetI ASST 8 cut(s) 160, 201, 321, 373, 424, 455, 501, 581
SfaNI GCATC 2 cut(s) 46, 691
Sfr274I CTCGAG 1 cut(s) 574
Sfr303I CCGCGG 1 cut(s) 589
SgrBI CCGCGG 1 cut(s) 589
SinI GGWCC 4 cut(s) 96, 241, 427, 537
SlaI CTCGAG 1 cut(s) 574
SmaI CCCGGG 1 cut(s) 655
SmiMI CAYNNNNRTG 1 cut(s) 42
SmlI CTYRAG 1 cut(s) 574
SmoI CTYRAG 1 cut(s) 574
SphI GCATGC 2 cut(s) 16, 233
SspMI CTAG 4 cut(s) 716, 746, 804, 856
SstI GAGCTC 1 cut(s) 373
StyD4I CCNGG 5 cut(s) 49, 400, 615, 652, 653
StyI CCWWGG 7 cut(s) 99, 357, 710, 772, 794, 829, 850
TaaI ACNGT 1 cut(s) 667
TaiI ACGT 2 cut(s) 321, 455
TaqI TCGA 6 cut(s) 208, 219, 327, 365, 575, 669
TaqII GACCGA 1 cut(s) 209
TauI GCSGC 3 cut(s) 436, 591, 607
TfiI GAWTC 1 cut(s) 362
Tru1I TTAA 1 cut(s) 135
Tru9I TTAA 1 cut(s) 135
TseI GCWGC 5 cut(s) 9, 306, 338, 516, 579
TspGWI ACGGA 3 cut(s) 109, 482, 638
TspMI CCCGGG 1 cut(s) 653
Van91I CCANNNNNTGG 1 cut(s) 436
VneI GTGCAC 1 cut(s) 183
VpaK11BI GGWCC 4 cut(s) 96, 241, 427, 537
XagI CCTNNNNNAGG 1 cut(s) 749
XceI RCATGY 3 cut(s) 16, 115, 233
XhoI CTCGAG 1 cut(s) 574
XmaI CCCGGG 1 cut(s) 653
XmiI GTMKAC 1 cut(s) 669
XspI CTAG 4 cut(s) 716, 746, 804, 856
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.