Rroxscaffold_54G00443530

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000054
OG0000104
Physical Location & Seq
Forward (+)
68644 .. 69414
771 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_54G00443530.1

Sequence Viewer

Length: 501 bp
ATGGGGGCCGGCGATGCGCCTCGGTCGGATGTGGAACGGTCACAAGCCGGTCCGCCACTCGACTCGGGGCGTGGACCGTTACGGATTGCGGCGGCGGCCAAAGCCCGGCTGTTGATATGCCCGTGGAGACGTCGTCGACGCGATCATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCCGGCGCAAGGAAGCTAATGTGCGGGATCCCTTTGCGGGTGCACCGCCGACCGACCTTGATCTTCGAGAAGGGTTCGAGTGTGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCGAGCGGGGCGAAGCCGAGGAAACTCGGTGGAGGCCCGCAGCGATACCGACGTGCAAATCGACGGCGTGGCTGCTTTGTTGAGCCACGCCAAGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTACGCGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

166

Amino Acids

17.97

Weight (kDa)

9.83

Isoelectric Point (pI)

73.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 133
AccB1I GGYRCC 1 cut(s) 483
AccBSI CCGCTC 1 cut(s) 320
AccI GTMKAC 1 cut(s) 136
AccII CGCG 2 cut(s) 141, 496
AclWI GGATC 2 cut(s) 215, 228
AcoI YGGCCR 1 cut(s) 96
AcyI GRCGYC 1 cut(s) 130
AfiI CCNNNNNNNGG 7 cut(s) 105, 202, 230, 302, 406, 473, 480
AjiI CACGTC 1 cut(s) 367
AluBI AGCT 2 cut(s) 209, 419
AluI AGCT 2 cut(s) 209, 419
Alw21I GWGCWC 3 cut(s) 194, 238, 421
Alw26I GTCTC 2 cut(s) 121, 171
Alw44I GTGCAC 1 cut(s) 234
AlwI GGATC 2 cut(s) 215, 228
Ama87I CYCGRG 1 cut(s) 64
AoxI GGCC 4 cut(s) 6, 96, 348, 428
ApaLI GTGCAC 1 cut(s) 234
ApeKI GCWGC 3 cut(s) 154, 354, 386
AspLEI GCGC 4 cut(s) 19, 163, 201, 498
AspS9I GGNCC 6 cut(s) 6, 50, 74, 292, 349, 428
AsuC2I CCSGG 3 cut(s) 106, 196, 475
AsuHPI GGTGA 1 cut(s) 317
AvaI CYCGRG 1 cut(s) 64
AvaII GGWCC 3 cut(s) 50, 74, 292
BaeGI GKGCMC 2 cut(s) 238, 488
BaeI ACNNNNGTAYC 2 cut(s) 351, 384
BamHI GGATCC 1 cut(s) 220
BanI GGYRCC 1 cut(s) 483
BanII GRGCYC 1 cut(s) 421
BarI GAAGNNNNNNTAC 2 cut(s) 462, 494
Bbv12I GWGCWC 3 cut(s) 194, 238, 421
BbvI GCAGC 3 cut(s) 166, 366, 373
BccI CCATC 1 cut(s) 296
BceAI ACGGC 3 cut(s) 148, 394, 465
BcgI CGANNNNNNTGC 2 cut(s) 269, 303
BcnI CCSGG 3 cut(s) 106, 196, 475
BcoDI GTCTC 2 cut(s) 121, 171
BglI GCCNNNNNGGC 1 cut(s) 169
BisI GCNGC 6 cut(s) 90, 93, 96, 155, 355, 387
BlsI GCNGC 6 cut(s) 91, 94, 97, 156, 356, 388
Bme1390I CCNGG 3 cut(s) 106, 196, 475
Bme18I GGWCC 3 cut(s) 50, 74, 292
BmeT110I CYCGRG 1 cut(s) 64
BmgBI CACGTC 1 cut(s) 367
BmgT120I GGNCC 6 cut(s) 6, 50, 74, 292, 349, 428
BmiI GGNNCC 5 cut(s) 7, 222, 293, 294, 485
BmrFI CCNGG 3 cut(s) 106, 196, 475
BmsI GCATC 3 cut(s) 4, 191, 444
BpuMI CCSGG 3 cut(s) 106, 196, 475
BsaHI GRCGYC 1 cut(s) 130
BsaJI CCNNGG 4 cut(s) 20, 122, 331, 405
BsaWI WCCGGW 1 cut(s) 466
BsaXI ACNNNNNCTCC 2 cut(s) 118, 148
Bsc4I CCNNNNNNNGG 7 cut(s) 105, 202, 230, 302, 406, 473, 480
Bse118I RCCGGY 2 cut(s) 8, 47
BseDI CCNNGG 4 cut(s) 20, 122, 331, 405
BseGI GGATG 2 cut(s) 34, 466
BseLI CCNNNNNNNGG 7 cut(s) 105, 202, 230, 302, 406, 473, 480
BseSI GKGCMC 2 cut(s) 238, 488
BseXI GCAGC 3 cut(s) 166, 366, 373
Bsh1236I CGCG 2 cut(s) 141, 496
Bsh1285I CGRYCG 2 cut(s) 26, 246
BshFI GGCC 4 cut(s) 8, 98, 350, 430
BshNI GGYRCC 1 cut(s) 483
BsiEI CGRYCG 2 cut(s) 26, 246
BsiHKAI GWGCWC 3 cut(s) 194, 238, 421
BsiHKCI CYCGRG 1 cut(s) 64
BsiSI CCGG 6 cut(s) 9, 48, 106, 196, 467, 474
BslFI GGGAC 1 cut(s) 305
BslI CCNNNNNNNGG 7 cut(s) 105, 202, 230, 302, 406, 473, 480
BsmAI GTCTC 2 cut(s) 121, 171
BsmBI CGTCTC 2 cut(s) 121, 171
BsmFI GGGAC 1 cut(s) 305
BsnI GGCC 4 cut(s) 8, 98, 350, 430
BsoBI CYCGRG 1 cut(s) 64
Bsp1286I GDGCHC 4 cut(s) 194, 238, 421, 488
Bsp143I GATC 3 cut(s) 142, 220, 253
BspANI GGCC 4 cut(s) 8, 98, 350, 430
BspFNI CGCG 2 cut(s) 141, 496
BspLI GGNNCC 5 cut(s) 7, 222, 293, 294, 485
BspPI GGATC 2 cut(s) 215, 228
BspT107I GGYRCC 1 cut(s) 483
BsrBI CCGCTC 1 cut(s) 320
BsrFI RCCGGY 2 cut(s) 8, 47
BssAI RCCGGY 2 cut(s) 8, 47
BssECI CCNNGG 4 cut(s) 20, 122, 331, 405
BssMI GATC 3 cut(s) 142, 220, 253
BssNI GRCGYC 1 cut(s) 130
BssT1I CCWWGG 1 cut(s) 405
Bst4CI ACNGT 3 cut(s) 39, 78, 483
BstACI GRCGYC 1 cut(s) 130
BstC8I GCNNGC 6 cut(s) 10, 159, 174, 190, 282, 352
BstDSI CCRYGG 1 cut(s) 122
BstF5I GGATG 2 cut(s) 34, 466
BstFNI CGCG 2 cut(s) 141, 496
BstHHI GCGC 4 cut(s) 19, 163, 201, 498
BstKTI GATC 3 cut(s) 145, 223, 256
BstMAI GTCTC 2 cut(s) 121, 171
BstMBI GATC 3 cut(s) 142, 220, 253
BstMCI CGRYCG 2 cut(s) 26, 246
BstMWI GCNNNNNNNGC 6 cut(s) 14, 95, 101, 160, 169, 198
BstNSI RCATGY 2 cut(s) 161, 284
BstSCI CCNGG 3 cut(s) 104, 194, 473
BstSLI GKGCMC 2 cut(s) 238, 488
BstUI CGCG 2 cut(s) 141, 496
BstV1I GCAGC 3 cut(s) 166, 366, 373
BstX2I RGATCY 1 cut(s) 220
BstYI RGATCY 1 cut(s) 220
BsuRI GGCC 4 cut(s) 8, 98, 350, 430
BtgI CCRYGG 1 cut(s) 122
BtgZI GCGATG 2 cut(s) 27, 467
BtrI CACGTC 1 cut(s) 367
BtsCI GGATG 2 cut(s) 34, 466
Cac8I GCNNGC 6 cut(s) 10, 159, 174, 190, 282, 352
CfoI GCGC 4 cut(s) 19, 163, 201, 498
Cfr10I RCCGGY 2 cut(s) 8, 47
Cfr13I GGNCC 6 cut(s) 6, 50, 74, 292, 349, 428
CpoI CGGWCCG 1 cut(s) 50
CseI GACGC 1 cut(s) 147
CspI CGGWCCG 1 cut(s) 50
CviAII CATG 3 cut(s) 146, 158, 281
DpnI GATC 3 cut(s) 144, 222, 255
DpnII GATC 3 cut(s) 142, 220, 253
EaeI YGGCCR 1 cut(s) 96
EciI GGCGGA 1 cut(s) 42
Ecl136II GAGCTC 1 cut(s) 419
Eco130I CCWWGG 1 cut(s) 405
Eco24I GRGCYC 1 cut(s) 421
Eco47I GGWCC 3 cut(s) 50, 74, 292
Eco53kI GAGCTC 1 cut(s) 419
Eco88I CYCGRG 1 cut(s) 64
EcoICRI GAGCTC 1 cut(s) 419
EcoO109I RGGNCCY 1 cut(s) 292
EcoT14I CCWWGG 1 cut(s) 405
EcoT38I GRGCYC 1 cut(s) 421
ErhI CCWWGG 1 cut(s) 405
Esp3I CGTCTC 2 cut(s) 121, 171
FaeI CATG 3 cut(s) 149, 161, 284
FaiI YATR 5 cut(s) 118, 147, 159, 282, 313
FaqI GGGAC 1 cut(s) 305
FatI CATG 3 cut(s) 145, 157, 280
FauI CCCGC 5 cut(s) 210, 223, 313, 359, 450
FblI GTMKAC 1 cut(s) 136
Fnu4HI GCNGC 6 cut(s) 90, 93, 96, 155, 355, 387
FokI GGATG 2 cut(s) 41, 473
FriOI GRGCYC 1 cut(s) 421
Fsp4HI GCNGC 6 cut(s) 90, 93, 96, 155, 355, 387
GlaI GCGC 4 cut(s) 18, 162, 200, 497
GluI GCNGC 6 cut(s) 90, 93, 96, 155, 355, 387
HaeIII GGCC 4 cut(s) 8, 98, 350, 430
HapII CCGG 6 cut(s) 9, 48, 106, 196, 467, 474
HgaI GACGC 1 cut(s) 147
HhaI GCGC 4 cut(s) 19, 163, 201, 498
Hin1I GRCGYC 1 cut(s) 130
Hin1II CATG 3 cut(s) 149, 161, 284
Hin6I GCGC 4 cut(s) 17, 161, 199, 496
HinP1I GCGC 4 cut(s) 17, 161, 199, 496
HincII GTYRAC 1 cut(s) 137
HindII GTYRAC 1 cut(s) 137
HinfI GANTC 2 cut(s) 62, 410
HpaII CCGG 6 cut(s) 9, 48, 106, 196, 467, 474
HphI GGTGA 1 cut(s) 317
Hpy166II GTNNAC 4 cut(s) 74, 137, 236, 308
Hpy188I TCNGA 1 cut(s) 28
Hpy188III TCNNGA 3 cut(s) 260, 290, 414
Hpy8I GTNNAC 4 cut(s) 74, 137, 236, 308
Hpy99I CGWCG 5 cut(s) 135, 138, 141, 368, 380
HpyAV CCTTC 1 cut(s) 257
HpyCH4III ACNGT 3 cut(s) 39, 78, 483
HpyCH4IV ACGT 2 cut(s) 130, 366
HpyCH4V TGCA 2 cut(s) 236, 370
HpyF10VI GCNNNNNNNGC 6 cut(s) 14, 95, 101, 160, 169, 198
HpySE526I ACGT 2 cut(s) 130, 366
Hsp92I GRCGYC 1 cut(s) 130
Hsp92II CATG 3 cut(s) 149, 161, 284
HspAI GCGC 4 cut(s) 17, 161, 199, 496
KflI GGGWCCC 1 cut(s) 292
KroI GCCGGC 1 cut(s) 8
KroNI GCCGGC 1 cut(s) 10
Kzo9I GATC 3 cut(s) 142, 220, 253
LmnI GCTCC 2 cut(s) 197, 424
LpnPI CCDG 7 cut(s) 22, 61, 119, 209, 298, 480, 487
Lsp1109I GCAGC 3 cut(s) 166, 366, 373
LweI GCATC 3 cut(s) 4, 191, 444
MaeII ACGT 2 cut(s) 130, 366
MaeIII GTNAC 3 cut(s) 39, 78, 477
MalI GATC 3 cut(s) 144, 222, 255
MbiI CCGCTC 1 cut(s) 320
MboI GATC 3 cut(s) 142, 220, 253
MboII GAAGA 1 cut(s) 248
MflI RGATCY 1 cut(s) 220
MhlI GDGCHC 4 cut(s) 194, 238, 421, 488
MlyI GAGTC 1 cut(s) 56
MmeI TCCRAC 1 cut(s) 6
MnlI CCTC 3 cut(s) 30, 326, 340
MroNI GCCGGC 1 cut(s) 8
MslI CAYNNNNRTG 1 cut(s) 187
MspI CCGG 6 cut(s) 9, 48, 106, 196, 467, 474
MspR9I CCNGG 3 cut(s) 106, 196, 475
MvnI CGCG 2 cut(s) 141, 496
MwoI GCNNNNNNNGC 6 cut(s) 14, 95, 101, 160, 169, 198
NaeI GCCGGC 1 cut(s) 10
NciI CCSGG 3 cut(s) 106, 196, 475
NdeII GATC 3 cut(s) 142, 220, 253
NgoMIV GCCGGC 1 cut(s) 8
NlaIII CATG 3 cut(s) 149, 161, 284
NlaIV GGNNCC 5 cut(s) 7, 222, 293, 294, 485
NmeAIII GCCGAG 3 cut(s) 148, 341, 356
NmuCI GTSAC 1 cut(s) 39
NspI RCATGY 2 cut(s) 161, 284
PaeI GCATGC 2 cut(s) 161, 284
PcsI WCGNNNNNNNCGW 2 cut(s) 185, 372
PdiI GCCGGC 1 cut(s) 10
PfeI GAWTC 1 cut(s) 410
PflFI GACNNNGTC 1 cut(s) 132
PkrI GCNGC 6 cut(s) 91, 94, 97, 156, 356, 388
PleI GAGTC 1 cut(s) 56
PpsI GAGTC 1 cut(s) 56
PpuMI RGGWCCY 1 cut(s) 292
Psp124BI GAGCTC 1 cut(s) 421
Psp5II RGGWCCY 1 cut(s) 292
PspN4I GGNNCC 5 cut(s) 7, 222, 293, 294, 485
PspPI GGNCC 6 cut(s) 6, 50, 74, 292, 349, 428
PspPPI RGGWCCY 1 cut(s) 292
PsuI RGATCY 1 cut(s) 220
PsyI GACNNNGTC 1 cut(s) 132
RseI CAYNNNNRTG 1 cut(s) 187
Rsr2I CGGWCCG 1 cut(s) 50
RsrII CGGWCCG 1 cut(s) 50
SacI GAGCTC 1 cut(s) 421
SalI GTCGAC 1 cut(s) 135
SatI GCNGC 6 cut(s) 90, 93, 96, 155, 355, 387
Sau3AI GATC 3 cut(s) 142, 220, 253
Sau96I GGNCC 6 cut(s) 6, 50, 74, 292, 349, 428
SchI GAGTC 1 cut(s) 56
ScrFI CCNGG 3 cut(s) 106, 196, 475
SduI GDGCHC 4 cut(s) 194, 238, 421, 488
SetI ASST 5 cut(s) 133, 211, 252, 369, 421
SfaNI GCATC 3 cut(s) 4, 191, 444
SgrDI CGTCGACG 1 cut(s) 135
SinI GGWCC 3 cut(s) 50, 74, 292
SmiMI CAYNNNNRTG 1 cut(s) 187
SphI GCATGC 2 cut(s) 161, 284
SstI GAGCTC 1 cut(s) 421
StyD4I CCNGG 3 cut(s) 104, 194, 473
StyI CCWWGG 1 cut(s) 405
TaaI ACNGT 3 cut(s) 39, 78, 483
TaiI ACGT 2 cut(s) 133, 369
TaqI TCGA 6 cut(s) 60, 136, 259, 270, 375, 413
TaqII GACCGA 2 cut(s) 12, 260
TauI GCSGC 3 cut(s) 92, 95, 98
TfiI GAWTC 1 cut(s) 410
TseFI GTSAC 1 cut(s) 39
TseI GCWGC 3 cut(s) 154, 354, 386
Tsp45I GTSAC 1 cut(s) 39
TspDTI ATGAA 1 cut(s) 477
TspGWI ACGGA 1 cut(s) 97
Tth111I GACNNNGTC 1 cut(s) 132
VneI GTGCAC 1 cut(s) 234
VpaK11BI GGWCC 3 cut(s) 50, 74, 292
XceI RCATGY 2 cut(s) 161, 284
XmiI GTMKAC 1 cut(s) 136
ZraI GACGTC 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.