Rroxscaffold_48G00448470

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000048
OG0000104
Physical Location & Seq
Reverse (-)
28671 .. 29486
816 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_48G00448470.1

Sequence Viewer

Length: 618 bp
ATGGCGCTTAAGCGCGTGACCTATACCGGCCGTCGGGGCAAGTGCCGAGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACACAGGGCGTGAGCCGGGCGGAGCGGCCGTCGGTGCGGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGCCTGCCCACCACTGGAAACGGCTCGGCCGGAGGTAGGGTCCGGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCGGGTCTCCAAGGTGAACAGACCTGCGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGGCTGGGCACGGGGGTCCCGGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACGGTCGACTCGGGCTGGTACGGACAAGGGGAATCCGACTGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

205

Amino Acids

21.47

Weight (kDa)

11.64

Isoelectric Point (pI)

52.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 362
AccBSI CCGCTC 2 cut(s) 110, 507
AccI GTMKAC 1 cut(s) 578
AccII CGCG 5 cut(s) 15, 70, 250, 498, 517
AccIII TCCGGA 1 cut(s) 286
AclWI GGATC 3 cut(s) 132, 393, 406
AcoI YGGCCR 4 cut(s) 28, 111, 207, 522
AfaI GTAC 2 cut(s) 318, 592
AfiI CCNNNNNNNGG 6 cut(s) 33, 175, 194, 216, 229, 531
AflII CTTAAG 1 cut(s) 8
AgsI TTSAA 4 cut(s) 150, 164, 281, 572
AhdI GACNNNNNGTC 1 cut(s) 357
AjiI CACGTC 1 cut(s) 246
AluBI AGCT 1 cut(s) 489
AluI AGCT 1 cut(s) 489
Alw21I GWGCWC 1 cut(s) 240
Alw26I GTCTC 1 cut(s) 341
AlwI GGATC 3 cut(s) 132, 393, 406
Ama87I CYCGRG 4 cut(s) 409, 484, 562, 582
Aor13HI TCCGGA 1 cut(s) 286
AoxI GGCC 6 cut(s) 28, 111, 166, 207, 273, 522
ApeKI GCWGC 3 cut(s) 79, 425, 489
AspLEI GCGC 4 cut(s) 7, 15, 70, 266
AspS9I GGNCC 5 cut(s) 220, 274, 292, 447, 453
AsuC2I CCSGG 6 cut(s) 102, 269, 451, 526, 563, 564
AsuHPI GGTGA 2 cut(s) 356, 487
AvaI CYCGRG 4 cut(s) 409, 484, 562, 582
AvaII GGWCC 4 cut(s) 220, 292, 447, 453
BaeGI GKGCMC 1 cut(s) 442
BamHI GGATCC 1 cut(s) 398
BanII GRGCYC 1 cut(s) 52
Bbv12I GWGCWC 1 cut(s) 240
BbvI GCAGC 3 cut(s) 66, 412, 476
BceAI ACGGC 3 cut(s) 15, 98, 217
BcnI CCSGG 6 cut(s) 102, 269, 451, 526, 563, 564
BcoDI GTCTC 1 cut(s) 341
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 8
BfuAI ACCTGC 1 cut(s) 362
BglI GCCNNNNNGGC 2 cut(s) 36, 272
Bme1390I CCNGG 6 cut(s) 102, 269, 451, 526, 563, 564
Bme18I GGWCC 4 cut(s) 220, 292, 447, 453
BmeRI GACNNNNNGTC 1 cut(s) 357
BmeT110I CYCGRG 4 cut(s) 409, 484, 562, 582
BmgBI CACGTC 1 cut(s) 246
BmgT120I GGNCC 5 cut(s) 220, 274, 292, 447, 453
BmiI GGNNCC 5 cut(s) 221, 400, 448, 449, 455
BmrFI CCNGG 6 cut(s) 102, 269, 451, 526, 563, 564
BmrI ACTGGG 1 cut(s) 546
BmsI GCATC 1 cut(s) 338
BmuI ACTGGG 1 cut(s) 546
BpuMI CCSGG 6 cut(s) 102, 269, 451, 526, 563, 564
BsaI GGTCTC 1 cut(s) 341
BsaJI CCNNGG 6 cut(s) 267, 340, 408, 496, 525, 562
BsaWI WCCGGW 2 cut(s) 258, 286
BsaXI ACNNNNNCTCC 4 cut(s) 99, 129, 204, 234
Bsc4I CCNNNNNNNGG 6 cut(s) 33, 175, 194, 216, 229, 531
Bse118I RCCGGY 2 cut(s) 26, 310
Bse1I ACTGG 2 cut(s) 199, 541
BseAI TCCGGA 1 cut(s) 286
BseDI CCNNGG 6 cut(s) 267, 340, 408, 496, 525, 562
BseLI CCNNNNNNNGG 6 cut(s) 33, 175, 194, 216, 229, 531
BseNI ACTGG 2 cut(s) 199, 541
BseSI GKGCMC 1 cut(s) 442
BseX3I CGGCCG 4 cut(s) 28, 111, 207, 522
BseXI GCAGC 3 cut(s) 66, 412, 476
BseYI CCCAGC 1 cut(s) 435
Bsh1236I CGCG 5 cut(s) 15, 70, 250, 498, 517
Bsh1285I CGRYCG 7 cut(s) 31, 77, 114, 210, 315, 525, 578
BshFI GGCC 6 cut(s) 30, 113, 168, 209, 275, 524
BsiEI CGRYCG 7 cut(s) 31, 77, 114, 210, 315, 525, 578
BsiHKAI GWGCWC 1 cut(s) 240
BsiHKCI CYCGRG 4 cut(s) 409, 484, 562, 582
BslFI GGGAC 3 cut(s) 433, 439, 543
BslI CCNNNNNNNGG 6 cut(s) 33, 175, 194, 216, 229, 531
BsmAI GTCTC 1 cut(s) 341
BsmFI GGGAC 3 cut(s) 433, 439, 543
BsnI GGCC 6 cut(s) 30, 113, 168, 209, 275, 524
Bso31I GGTCTC 1 cut(s) 341
BsoBI CYCGRG 4 cut(s) 409, 484, 562, 582
Bsp1286I GDGCHC 3 cut(s) 52, 240, 442
Bsp13I TCCGGA 1 cut(s) 286
Bsp143I GATC 2 cut(s) 124, 398
BspANI GGCC 6 cut(s) 30, 113, 168, 209, 275, 524
BspEI TCCGGA 1 cut(s) 286
BspFNI CGCG 5 cut(s) 15, 70, 250, 498, 517
BspLI GGNNCC 5 cut(s) 221, 400, 448, 449, 455
BspMI ACCTGC 1 cut(s) 362
BspPI GGATC 3 cut(s) 132, 393, 406
BspQI GCTCTTC 1 cut(s) 228
BspTI CTTAAG 1 cut(s) 8
BspTNI GGTCTC 1 cut(s) 341
BsrBI CCGCTC 2 cut(s) 110, 507
BsrFI RCCGGY 2 cut(s) 26, 310
BsrI ACTGG 2 cut(s) 199, 541
BssAI RCCGGY 2 cut(s) 26, 310
BssECI CCNNGG 6 cut(s) 267, 340, 408, 496, 525, 562
BssMI GATC 2 cut(s) 124, 398
BssT1I CCWWGG 1 cut(s) 340
Bst4CI ACNGT 2 cut(s) 576, 613
Bst6I CTCTTC 2 cut(s) 166, 228
BstAFI CTTAAG 1 cut(s) 8
BstC8I GCNNGC 2 cut(s) 185, 519
BstDSI CCRYGG 1 cut(s) 496
BstFNI CGCG 5 cut(s) 15, 70, 250, 498, 517
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 4 cut(s) 7, 15, 70, 266
BstKTI GATC 2 cut(s) 127, 401
BstMAI GTCTC 1 cut(s) 341
BstMBI GATC 2 cut(s) 124, 398
BstMCI CGRYCG 7 cut(s) 31, 77, 114, 210, 315, 525, 578
BstSCI CCNGG 6 cut(s) 100, 267, 449, 524, 561, 562
BstSLI GKGCMC 1 cut(s) 442
BstUI CGCG 5 cut(s) 15, 70, 250, 498, 517
BstV1I GCAGC 3 cut(s) 66, 412, 476
BstX2I RGATCY 2 cut(s) 124, 398
BstYI RGATCY 2 cut(s) 124, 398
BstZI CGGCCG 4 cut(s) 28, 111, 207, 522
BsuRI GGCC 6 cut(s) 30, 113, 168, 209, 275, 524
BtgI CCRYGG 1 cut(s) 496
BtrI CACGTC 1 cut(s) 246
BtsIMutI CAGTG 1 cut(s) 192
BveI ACCTGC 1 cut(s) 362
Cac8I GCNNGC 2 cut(s) 185, 519
CfoI GCGC 4 cut(s) 7, 15, 70, 266
Cfr10I RCCGGY 2 cut(s) 26, 310
Cfr13I GGNCC 5 cut(s) 220, 274, 292, 447, 453
Cfr42I CCGCGG 1 cut(s) 499
Cfr9I CCCGGG 1 cut(s) 562
Csp6I GTAC 2 cut(s) 317, 591
CviQI GTAC 2 cut(s) 317, 591
DpnI GATC 2 cut(s) 126, 400
DpnII GATC 2 cut(s) 124, 398
DriI GACNNNNNGTC 1 cut(s) 357
EaeI YGGCCR 4 cut(s) 28, 111, 207, 522
EagI CGGCCG 4 cut(s) 28, 111, 207, 522
Eam1104I CTCTTC 2 cut(s) 166, 228
Eam1105I GACNNNNNGTC 1 cut(s) 357
EarI CTCTTC 2 cut(s) 166, 228
EciI GGCGGA 1 cut(s) 120
EclXI CGGCCG 4 cut(s) 28, 111, 207, 522
Eco130I CCWWGG 1 cut(s) 340
Eco24I GRGCYC 1 cut(s) 52
Eco31I GGTCTC 1 cut(s) 341
Eco47I GGWCC 4 cut(s) 220, 292, 447, 453
Eco52I CGGCCG 4 cut(s) 28, 111, 207, 522
Eco88I CYCGRG 4 cut(s) 409, 484, 562, 582
EcoO109I RGGNCCY 1 cut(s) 447
EcoT14I CCWWGG 1 cut(s) 340
EcoT38I GRGCYC 1 cut(s) 52
ErhI CCWWGG 1 cut(s) 340
FaiI YATR 2 cut(s) 24, 323
FaqI GGGAC 3 cut(s) 433, 439, 543
FauI CCCGC 1 cut(s) 500
FblI GTMKAC 1 cut(s) 578
FriOI GRGCYC 1 cut(s) 52
GlaI GCGC 4 cut(s) 6, 14, 69, 265
GsaI CCCAGC 1 cut(s) 439
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 6 cut(s) 30, 113, 168, 209, 275, 524
HhaI GCGC 4 cut(s) 7, 15, 70, 266
Hin6I GCGC 4 cut(s) 5, 13, 68, 264
HinP1I GCGC 4 cut(s) 5, 13, 68, 264
HincII GTYRAC 1 cut(s) 579
HindII GTYRAC 1 cut(s) 579
HinfI GANTC 2 cut(s) 580, 604
HphI GGTGA 2 cut(s) 356, 487
Hpy166II GTNNAC 3 cut(s) 347, 478, 579
Hpy188I TCNGA 1 cut(s) 609
Hpy188III TCNNGA 3 cut(s) 287, 411, 456
Hpy8I GTNNAC 3 cut(s) 347, 478, 579
Hpy99I CGWCG 4 cut(s) 36, 119, 250, 468
HpyAV CCTTC 2 cut(s) 158, 558
HpyCH4III ACNGT 2 cut(s) 576, 613
HpyCH4IV ACGT 1 cut(s) 245
HpyCH4V TGCA 1 cut(s) 82
HpySE526I ACGT 1 cut(s) 245
HspAI GCGC 4 cut(s) 5, 13, 68, 264
KflI GGGWCCC 1 cut(s) 447
Kpn2I TCCGGA 1 cut(s) 286
KspI CCGCGG 1 cut(s) 499
Kzo9I GATC 2 cut(s) 124, 398
LguI GCTCTTC 1 cut(s) 228
LmnI GCTCC 2 cut(s) 107, 550
Lsp1109I GCAGC 3 cut(s) 66, 412, 476
LweI GCATC 1 cut(s) 338
MaeII ACGT 1 cut(s) 245
MaeIII GTNAC 2 cut(s) 16, 403
MalI GATC 2 cut(s) 126, 400
MbiI CCGCTC 2 cut(s) 110, 507
MboI GATC 2 cut(s) 124, 398
MboII GAAGA 2 cut(s) 183, 245
MflI RGATCY 2 cut(s) 124, 398
MhlI GDGCHC 3 cut(s) 52, 240, 442
MlyI GAGTC 1 cut(s) 574
MnlI CCTC 6 cut(s) 57, 167, 206, 283, 418, 423
MroI TCCGGA 1 cut(s) 286
MseI TTAA 2 cut(s) 9, 616
MspA1I CMGCKG 1 cut(s) 498
MspCI CTTAAG 1 cut(s) 8
MspR9I CCNGG 6 cut(s) 102, 269, 451, 526, 563, 564
MvnI CGCG 5 cut(s) 15, 70, 250, 498, 517
NciI CCSGG 6 cut(s) 102, 269, 451, 526, 563, 564
NdeII GATC 2 cut(s) 124, 398
NlaIV GGNNCC 5 cut(s) 221, 400, 448, 449, 455
NmeAIII GCCGAG 2 cut(s) 71, 185
NmuCI GTSAC 1 cut(s) 16
PaeR7I CTCGAG 1 cut(s) 484
PciSI GCTCTTC 1 cut(s) 228
PfeI GAWTC 1 cut(s) 604
PleI GAGTC 1 cut(s) 574
PpsI GAGTC 1 cut(s) 574
PpuMI RGGWCCY 1 cut(s) 447
Psp5II RGGWCCY 1 cut(s) 447
PspFI CCCAGC 1 cut(s) 435
PspN4I GGNNCC 5 cut(s) 221, 400, 448, 449, 455
PspPI GGNCC 5 cut(s) 220, 274, 292, 447, 453
PspPPI RGGWCCY 1 cut(s) 447
PspXI VCTCGAGB 1 cut(s) 484
PsuI RGATCY 2 cut(s) 124, 398
RsaI GTAC 2 cut(s) 318, 592
RsaNI GTAC 2 cut(s) 317, 591
SacII CCGCGG 1 cut(s) 499
SalI GTCGAC 1 cut(s) 577
SapI GCTCTTC 1 cut(s) 228
SaqAI TTAA 2 cut(s) 9, 616
Sau3AI GATC 2 cut(s) 124, 398
Sau96I GGNCC 5 cut(s) 220, 274, 292, 447, 453
SchI GAGTC 1 cut(s) 574
ScrFI CCNGG 6 cut(s) 102, 269, 451, 526, 563, 564
SduI GDGCHC 3 cut(s) 52, 240, 442
SetI ASST 7 cut(s) 23, 217, 248, 346, 356, 410, 491
SfaNI GCATC 1 cut(s) 338
Sfr274I CTCGAG 1 cut(s) 484
Sfr303I CCGCGG 1 cut(s) 499
SgrBI CCGCGG 1 cut(s) 499
SinI GGWCC 4 cut(s) 220, 292, 447, 453
SlaI CTCGAG 1 cut(s) 484
SmaI CCCGGG 1 cut(s) 564
SmlI CTYRAG 2 cut(s) 8, 484
SmoI CTYRAG 2 cut(s) 8, 484
SspI AATATT 1 cut(s) 146
StyD4I CCNGG 6 cut(s) 100, 267, 449, 524, 561, 562
StyI CCWWGG 1 cut(s) 340
TaaI ACNGT 2 cut(s) 576, 613
TaiI ACGT 1 cut(s) 248
TaqI TCGA 2 cut(s) 485, 578
TaqII GACCGA 1 cut(s) 309
TauI GCSGC 7 cut(s) 73, 113, 229, 275, 501, 517, 524
TfiI GAWTC 1 cut(s) 604
Tru1I TTAA 2 cut(s) 9, 616
Tru9I TTAA 2 cut(s) 9, 616
TscAI CASTG 1 cut(s) 199
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 3 cut(s) 79, 425, 489
Tsp45I GTSAC 1 cut(s) 16
TspGWI ACGGA 3 cut(s) 391, 547, 608
TspMI CCCGGG 1 cut(s) 562
TspRI CASTG 1 cut(s) 199
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 4 cut(s) 220, 292, 447, 453
XhoI CTCGAG 1 cut(s) 484
XmaI CCCGGG 1 cut(s) 562
XmiI GTMKAC 1 cut(s) 578
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.